RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 PACS2Q86VP3 889 aa13.2□□□□□ -0.3
HLCS-201ENST00000336648 TRPV3Q8NET8 790 aa13.2□□□□□ -0.3
HLCS-201ENST00000336648 LENG1Q96BZ8 264 aaPredicted RBP13.2□□□□□ -0.3
HLCS-201ENST00000336648 AHCYL2Q96HN2 611 aaKnown RBP13.2□□□□□ -0.3
HLCS-201ENST00000336648 TKTL2Q9H0I9 626 aa13.2□□□□□ -0.3
HLCS-201ENST00000336648 MGAT4AQ9UM21 535 aa13.2□□□□□ -0.3
HLCS-201ENST00000336648 LACTBL1A8MY62 500 aa13.2□□□□□ -0.3
HLCS-201ENST00000336648 TPP1O14773 563 aa13.2□□□□□ -0.3
HLCS-201ENST00000336648 FKBP1AP62942 108 aaKnown RBP13.2□□□□□ -0.3
HLCS-201ENST00000336648 ANXA8L1Q5VT79 327 aa13.2□□□□□ -0.3
HLCS-201ENST00000336648 FAM171A1Q5VUB5 890 aa13.2□□□□□ -0.3
HLCS-201ENST00000336648 ZNF662Q6ZS27 426 aa13.2□□□□□ -0.3
HLCS-201ENST00000336648 ADAMTSL2Q86TH1 951 aa13.2□□□□□ -0.3
HLCS-201ENST00000336648 SMYD1Q8NB12 490 aa13.2□□□□□ -0.3
HLCS-201ENST00000336648 OSBPL11Q9BXB4 747 aa13.2□□□□□ -0.3
HLCS-201ENST00000336648 GMPPBQ9Y5P6 360 aa13.2□□□□□ -0.3
HLCS-201ENST00000336648 UNC5CO95185 931 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 MAPK9P45984 424 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 POLD2P49005 469 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 ALDH5A1P51649 535 aaPredicted RBP13.19□□□□□ -0.3
HLCS-201ENST00000336648 CASP5P51878 434 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 ELF3P78545 371 aaPredicted RBP13.19□□□□□ -0.3
HLCS-201ENST00000336648 SCRN3Q0VDG4 424 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 ITPK1Q13572 414 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 GALNT18Q6P9A2 607 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 CXXC5Q7LFL8 322 aaKnown RBP13.19□□□□□ -0.3
HLCS-201ENST00000336648 ARMC8Q8IUR7 673 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 COLGALT2Q8IYK4 626 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 ATXN3LQ9H3M9 355 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 FBXO10Q9UK96 956 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 MANSC4A6NHS7 340 aaPredicted RBP13.19□□□□□ -0.3
HLCS-201ENST00000336648 GNB5O14775 395 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 GCATO75600 419 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 LDOC1O95751 146 aaPredicted RBP13.19□□□□□ -0.3
HLCS-201ENST00000336648 KLRC2P26717 231 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 RBL1P28749 1068 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 RPL5P46777 297 aaKnown RBP13.19□□□□□ -0.3
HLCS-201ENST00000336648 CLK2P49760 499 aaKnown RBP13.19□□□□□ -0.3
HLCS-201ENST00000336648 ZNF143P52747 638 aaPredicted RBP13.19□□□□□ -0.3
HLCS-201ENST00000336648 AIF1P55008 147 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 IFI35P80217 286 aaPredicted RBP13.19□□□□□ -0.3
HLCS-201ENST00000336648 PPM1LQ5SGD2 360 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 PRAMEF18Q5VWM3 479 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 WDR59Q6PJI9 974 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 CHPFQ8IZ52 775 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 OFCC1Q8IZS5 231 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 FUKQ8N0W3 1084 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 POU5F2Q8N7G0 328 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 TSPAN14Q8NG11 270 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 HEXDCQ8WVB3 486 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 SUSD6Q92537 303 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 GBA2Q9HCG7 927 aaPredicted RBP13.19□□□□□ -0.3
HLCS-201ENST00000336648 PNPLA3Q9NST1 481 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 VPS4AQ9UN37 437 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 RAP2CQ9Y3L5 183 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 SMCO3A2RU48 225 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 ACSL4O60488 711 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 ACAT1P24752 427 aaKnown RBP13.19□□□□□ -0.3
HLCS-201ENST00000336648 PERM1Q5SV97 790 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 IQSEC1Q6DN90 963 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 PNMA5Q96PV4 448 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 TEFMQ96QE5 360 aaKnown RBP13.19□□□□□ -0.3
HLCS-201ENST00000336648 C1QTNF1Q9BXJ1 281 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 EPB41L1Q9H4G0 881 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 SETD4Q9NVD3 440 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 NCANO14594 1321 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 FARP2O94887 1054 aaPredicted RBP13.19□□□□□ -0.3
HLCS-201ENST00000336648 OTCP00480 354 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 ITGAVP06756 1048 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 COX4I1P13073 169 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 PSME3P61289 254 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 LSM12Q3MHD2 195 aaKnown RBP13.19□□□□□ -0.3
HLCS-201ENST00000336648 PSMA8Q8TAA3 256 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 CSGALNACT1Q8TDX6 532 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 GORASP1Q9BQQ3 440 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 SPATA31A5Q5VU36 1347 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 FAM205AQ6ZU69 1335 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 SPATA31A7Q8IWB4 1347 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 CDC42BPAQ5VT25 1732 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 LOC100506127A0A0U1RQW1 187 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 UBE2Q2LH0YL09 131 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 SNX3O60493 162 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 PRG2P13727 222 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 MYL9P24844 172 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 ATP5C1P36542 298 aaKnown RBP13.19□□□□□ -0.3
HLCS-201ENST00000336648 CRATP43155 626 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 UGT2B15P54855 530 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 LPIN1Q14693 890 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 MAPKAPK3Q16644 382 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 FNDC3BQ53EP0 1204 aaKnown RBP13.19□□□□□ -0.3
HLCS-201ENST00000336648 CCSAPQ6IQ19 270 aaPredicted RBP13.19□□□□□ -0.3
HLCS-201ENST00000336648 FBXL19Q6PCT2 694 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 POLNQ7Z5Q5 900 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 KLHL23Q8NBE8 558 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 PRCCQ92733 491 aaPredicted RBP13.19□□□□□ -0.3
HLCS-201ENST00000336648 CERS2Q96G23 380 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 KLQ9UEF7 1012 aa13.19□□□□□ -0.3
HLCS-201ENST00000336648 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.18□□□□□ -0.3
HLCS-201ENST00000336648 CHURC1-FNTBB4DL54 471 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 BICRALQ6AI39 1079 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms