RNA–Protein interactions for RNA: ENST00000334668.8

HLA-F-217, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-217ENST00000334668 KRIT1O00522 736 aa18.62■□□□□ 0.57
HLA-F-217ENST00000334668 CTNNA1P35221 906 aaKnown RBP18.62■□□□□ 0.57
HLA-F-217ENST00000334668 RGRP47804 291 aa18.62■□□□□ 0.57
HLA-F-217ENST00000334668 MARCKSL1P49006 195 aa18.62■□□□□ 0.57
HLA-F-217ENST00000334668 CCZ1BP86790 482 aa18.62■□□□□ 0.57
HLA-F-217ENST00000334668 CCZ1P86791 482 aaPredicted RBP18.62■□□□□ 0.57
HLA-F-217ENST00000334668 GBE1Q04446 702 aa18.62■□□□□ 0.57
HLA-F-217ENST00000334668 RAD51Q06609 339 aa18.62■□□□□ 0.57
HLA-F-217ENST00000334668 SLC10A7Q0GE19 358 aa18.62■□□□□ 0.57
HLA-F-217ENST00000334668 LBRQ14739 615 aaKnown RBP18.62■□□□□ 0.57
HLA-F-217ENST00000334668 DUOXA1Q1HG43 343 aa18.62■□□□□ 0.57
HLA-F-217ENST00000334668 ZNF805Q5CZA5 627 aa18.62■□□□□ 0.57
HLA-F-217ENST00000334668 SLC23A3Q6PIS1 610 aa18.62■□□□□ 0.57
HLA-F-217ENST00000334668 RABEPKQ7Z6M1 372 aa18.62■□□□□ 0.57
HLA-F-217ENST00000334668 KIAA2013Q8IYS2 634 aa18.62■□□□□ 0.57
HLA-F-217ENST00000334668 TEX26Q8N6G2 289 aa18.62■□□□□ 0.57
HLA-F-217ENST00000334668 KIAA1524Q8TCG1 905 aa18.62■□□□□ 0.57
HLA-F-217ENST00000334668 KRT35Q92764 455 aa18.62■□□□□ 0.57
HLA-F-217ENST00000334668 CAPN10Q9HC96 672 aa18.62■□□□□ 0.57
HLA-F-217ENST00000334668 PREBQ9HCU5 417 aa18.62■□□□□ 0.57
HLA-F-217ENST00000334668 DYRK4Q9NR20 520 aa18.62■□□□□ 0.57
HLA-F-217ENST00000334668 DKK3Q9UBP4 350 aa18.62■□□□□ 0.57
HLA-F-217ENST00000334668 TRIM10Q9UDY6 481 aa18.62■□□□□ 0.57
HLA-F-217ENST00000334668 SEPT3Q9UH03 358 aa18.62■□□□□ 0.57
HLA-F-217ENST00000334668 ATXN2Q99700 1313 aaKnown RBP18.61■□□□□ 0.57
HLA-F-217ENST00000334668 PATE3B3GLJ2 98 aa18.61■□□□□ 0.57
HLA-F-217ENST00000334668 MUSKO15146 869 aa18.61■□□□□ 0.57
HLA-F-217ENST00000334668 INSIG1O15503 277 aa18.61■□□□□ 0.57
HLA-F-217ENST00000334668 LATO43561 262 aa18.61■□□□□ 0.57
HLA-F-217ENST00000334668 UGT2B4P06133 528 aa18.61■□□□□ 0.57
HLA-F-217ENST00000334668 TNNT1P13805 278 aa18.61■□□□□ 0.57
HLA-F-217ENST00000334668 ZFXP17010 805 aaPredicted RBP18.61■□□□□ 0.57
HLA-F-217ENST00000334668 MX2P20592 715 aa18.61■□□□□ 0.57
HLA-F-217ENST00000334668 CTNNA2P26232 953 aa18.61■□□□□ 0.57
HLA-F-217ENST00000334668 CD27P26842 260 aa18.61■□□□□ 0.57
HLA-F-217ENST00000334668 MAOBP27338 520 aa18.61■□□□□ 0.57
HLA-F-217ENST00000334668 HSPA9P38646 679 aaKnown RBP18.61■□□□□ 0.57
HLA-F-217ENST00000334668 RENBPP51606 427 aa18.61■□□□□ 0.57
HLA-F-217ENST00000334668 NEK3P51956 506 aa18.61■□□□□ 0.57
HLA-F-217ENST00000334668 GRM3Q14832 879 aa18.61■□□□□ 0.57
HLA-F-217ENST00000334668 SF3A2Q15428 464 aaKnown RBP18.61■□□□□ 0.57
HLA-F-217ENST00000334668 IFI16Q16666 785 aaKnown RBP18.61■□□□□ 0.57
HLA-F-217ENST00000334668 PARS2Q7L3T8 475 aaKnown RBP18.61■□□□□ 0.57
HLA-F-217ENST00000334668 TRIM69Q86WT6 500 aa18.61■□□□□ 0.57
HLA-F-217ENST00000334668 RCOR2Q8IZ40 523 aa18.61■□□□□ 0.57
HLA-F-217ENST00000334668 RGL4Q8IZJ4 473 aa18.61■□□□□ 0.57
HLA-F-217ENST00000334668 RYBPQ8N488 228 aaPredicted RBP18.61■□□□□ 0.57
HLA-F-217ENST00000334668 RNF10Q8N5U6 811 aaKnown RBP18.61■□□□□ 0.57
HLA-F-217ENST00000334668 EXD1Q8NHP7 514 aa18.61■□□□□ 0.57
HLA-F-217ENST00000334668 HCAR2Q8TDS4 363 aa18.61■□□□□ 0.57
HLA-F-217ENST00000334668 MAML1Q92585 1016 aa18.61■□□□□ 0.57
HLA-F-217ENST00000334668 EXOC2Q96KP1 924 aa18.61■□□□□ 0.57
HLA-F-217ENST00000334668 TUBGCP5Q96RT8 1024 aa18.61■□□□□ 0.57
HLA-F-217ENST00000334668 CINPQ9BW66 212 aaPredicted RBP18.61■□□□□ 0.57
HLA-F-217ENST00000334668 SUSD2Q9UGT4 822 aa18.61■□□□□ 0.57
HLA-F-217ENST00000334668 EIF2B4Q9UI10 523 aaKnown RBP18.61■□□□□ 0.57
HLA-F-217ENST00000334668 PCDHA3Q9Y5H8 950 aa18.61■□□□□ 0.57
HLA-F-217ENST00000334668 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.61■□□□□ 0.57
HLA-F-217ENST00000334668 DNAH14Q0VDD8 3507 aa18.61■□□□□ 0.57
HLA-F-217ENST00000334668 C16orf96A6NNT2 1141 aa18.6■□□□□ 0.57
HLA-F-217ENST00000334668 APOL1O14791 398 aa18.6■□□□□ 0.57
HLA-F-217ENST00000334668 KHNYNO15037 678 aaKnown RBP18.6■□□□□ 0.57
HLA-F-217ENST00000334668 AP1G1O43747 822 aa18.6■□□□□ 0.57
HLA-F-217ENST00000334668 FSBPO95073 299 aa18.6■□□□□ 0.57
HLA-F-217ENST00000334668 ZRANB2O95218 330 aaKnown RBP eCLIP18.6■□□□□ 0.57
HLA-F-217ENST00000334668 SERPINF2P08697 491 aa18.6■□□□□ 0.57
HLA-F-217ENST00000334668 ADRB3P13945 408 aa18.6■□□□□ 0.57
HLA-F-217ENST00000334668 CR2P20023 1033 aa18.6■□□□□ 0.57
HLA-F-217ENST00000334668 CCNCP24863 283 aa18.6■□□□□ 0.57
HLA-F-217ENST00000334668 PEX5P50542 639 aa18.6■□□□□ 0.57
HLA-F-217ENST00000334668 NAP1L1P55209 391 aaKnown RBP18.6■□□□□ 0.57
HLA-F-217ENST00000334668 LMNB2Q03252 620 aa18.6■□□□□ 0.57
HLA-F-217ENST00000334668 HNRNPDQ14103 355 aaKnown RBP18.6■□□□□ 0.57
HLA-F-217ENST00000334668 TCEAL6Q6IPX3 200 aa18.6■□□□□ 0.57
HLA-F-217ENST00000334668 NEK5Q6P3R8 708 aa18.6■□□□□ 0.57
HLA-F-217ENST00000334668 GDPD4Q6W3E5 623 aa18.6■□□□□ 0.57
HLA-F-217ENST00000334668 SPOCD1Q6ZMY3 1216 aa18.6■□□□□ 0.57
HLA-F-217ENST00000334668 ZNF662Q6ZS27 426 aa18.6■□□□□ 0.57
HLA-F-217ENST00000334668 SRLQ86TD4 932 aa18.6■□□□□ 0.57
HLA-F-217ENST00000334668 NT5DC3Q86UY8 548 aa18.6■□□□□ 0.57
HLA-F-217ENST00000334668 PGBD5Q8N414 524 aa18.6■□□□□ 0.57
HLA-F-217ENST00000334668 TCEAL3Q969E4 200 aa18.6■□□□□ 0.57
HLA-F-217ENST00000334668 HDAC11Q96DB2 347 aa18.6■□□□□ 0.57
HLA-F-217ENST00000334668 KLHL32Q96NJ5 620 aa18.6■□□□□ 0.57
HLA-F-217ENST00000334668 MGME1Q9BQP7 344 aa18.6■□□□□ 0.57
HLA-F-217ENST00000334668 MAK16Q9BXY0 300 aaKnown RBP18.6■□□□□ 0.57
HLA-F-217ENST00000334668 EBF2Q9HAK2 575 aa18.6■□□□□ 0.57
HLA-F-217ENST00000334668 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.6■□□□□ 0.57
HLA-F-217ENST00000334668 LRRK1Q38SD2 2015 aa18.59■□□□□ 0.57
HLA-F-217ENST00000334668 TBC1D3DA0A087WVF3 549 aa18.59■□□□□ 0.57
HLA-F-217ENST00000334668 TBC1D3IA0A087WXS9 549 aa18.59■□□□□ 0.57
HLA-F-217ENST00000334668 TBC1D3EA0A087X179 549 aa18.59■□□□□ 0.57
HLA-F-217ENST00000334668 TBC1D3KA0A087X1G2 549 aa18.59■□□□□ 0.57
HLA-F-217ENST00000334668 A0A1B0GTW7 788 aa18.59■□□□□ 0.57
HLA-F-217ENST00000334668 A0A1W2PPC4 97 aa18.59■□□□□ 0.57
HLA-F-217ENST00000334668 TSPAN11A1L157 253 aa18.59■□□□□ 0.57
HLA-F-217ENST00000334668 MACROD2A1Z1Q3 448 aa18.59■□□□□ 0.57
HLA-F-217ENST00000334668 CCDC66A2RUB6 948 aa18.59■□□□□ 0.57
HLA-F-217ENST00000334668 TBC1D3FA6NER0 549 aaPredicted RBP18.59■□□□□ 0.57
HLA-F-217ENST00000334668 FAM47DPA6NHR8 397 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms