RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 TBC1D3DA0A087WVF3 549 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 TBC1D3IA0A087WXS9 549 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 TBC1D3EA0A087X179 549 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 TBC1D3KA0A087X1G2 549 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 A0A1B0GTH6 734 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 TBC1D3FA6NER0 549 aaPredicted RBP6.47□□□□□ -1.37
USP16-201ENST00000334352 GPR89AB7ZAQ6 455 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 TBC1D3LB9A6J9 549 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 TRAFD1O14545 582 aaPredicted RBP6.47□□□□□ -1.37
USP16-201ENST00000334352 RAMP2O60895 175 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 RTN2O75298 545 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 LEFTY1O75610 366 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 CLSTN1O94985 981 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 TOP3BO95985 862 aaKnown RBP6.47□□□□□ -1.37
USP16-201ENST00000334352 IVLP07476 585 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 TBC1D3HP0C7X1 549 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 GPR89BP0CG08 455 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 KRT3P12035 628 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 CCNHP51946 323 aaPredicted RBP6.47□□□□□ -1.37
USP16-201ENST00000334352 NFATC4Q14934 902 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 EFHC2Q5JST6 749 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 CCDC183Q5T5S1 534 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 TBC1D3GQ6DHY5 549 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 TBC1D3CQ6IPX1 549 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 Q6ZVU0 165 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 ADAT2Q7Z6V5 191 aaKnown RBP6.47□□□□□ -1.37
USP16-201ENST00000334352 TBC1D3Q8IZP1 549 aaPredicted RBP6.47□□□□□ -1.37
USP16-201ENST00000334352 ATP11CQ8NB49 1132 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 AVL9Q8NBF6 648 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 ZNF548Q8NEK5 533 aaPredicted RBP6.47□□□□□ -1.37
USP16-201ENST00000334352 NEK11Q8NG66 645 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 MAML1Q92585 1016 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 FGF11Q92914 225 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 TADA1Q96BN2 335 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 COQ10AQ96MF6 247 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 GBP4Q96PP9 640 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 FUCA2Q9BTY2 467 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 EPB41L1Q9H4G0 881 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 POLR1BQ9H9Y6 1135 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 FSCN3Q9NQT6 498 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 CACNA1EQ15878 2313 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 TRABD2BA6NFA1 517 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 ARHGAP42A6NI28 874 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 TRIM38O00635 465 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 MTA2O94776 668 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 LRIG2O94898 1065 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 CYP1A2P05177 515 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 GLDCP23378 1020 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 GPR3P46089 330 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 NSFP46459 744 aaKnown RBP6.47□□□□□ -1.37
USP16-201ENST00000334352 PCBP4P57723 403 aaKnown RBP6.47□□□□□ -1.37
USP16-201ENST00000334352 POLR2LP62875 67 aaKnown RBP6.47□□□□□ -1.37
USP16-201ENST00000334352 ZFP36L1Q07352 338 aaKnown RBP6.47□□□□□ -1.37
USP16-201ENST00000334352 ARSIQ5FYB1 569 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 DEFB119Q8N690 84 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 GPR156Q8NFN8 814 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 TEX101Q9BY14 249 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 NAT10Q9H0A0 1025 aaKnown RBP6.47□□□□□ -1.37
USP16-201ENST00000334352 MIR1-1HGQ9H1L0 117 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 SYNCQ9H7C4 482 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 RMI1Q9H9A7 625 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 METTL5Q9NRN9 209 aaKnown RBP6.47□□□□□ -1.37
USP16-201ENST00000334352 RAD18Q9NS91 495 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 HAUS2Q9NVX0 235 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 CLCA2Q9UQC9 943 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 GTF3C3Q9Y5Q9 886 aa6.47□□□□□ -1.37
USP16-201ENST00000334352 ZFHX2Q9C0A1 2572 aaPredicted RBP6.47□□□□□ -1.37
USP16-201ENST00000334352 ANKRD62A6NC57 917 aa6.46□□□□□ -1.38
USP16-201ENST00000334352 K7ESM1 405 aa6.46□□□□□ -1.38
USP16-201ENST00000334352 ZW10O43264 779 aa6.46□□□□□ -1.38
USP16-201ENST00000334352 SMAD6O43541 496 aaKnown RBP6.46□□□□□ -1.38
USP16-201ENST00000334352 SIGLEC6O43699 453 aa6.46□□□□□ -1.38
USP16-201ENST00000334352 PEX11BO96011 259 aa6.46□□□□□ -1.38
USP16-201ENST00000334352 ITGB2P05107 769 aa6.46□□□□□ -1.38
USP16-201ENST00000334352 TFE3P19532 575 aaPredicted RBP6.46□□□□□ -1.38
USP16-201ENST00000334352 KELP23276 732 aa6.46□□□□□ -1.38
USP16-201ENST00000334352 ABL2P42684 1182 aa6.46□□□□□ -1.38
USP16-201ENST00000334352 BOLA3Q53S33 107 aa6.46□□□□□ -1.38
USP16-201ENST00000334352 ERMARDQ5T6L9 678 aa6.46□□□□□ -1.38
USP16-201ENST00000334352 ADAMTSL4Q6UY14 1074 aa6.46□□□□□ -1.38
USP16-201ENST00000334352 SRLQ86TD4 932 aa6.46□□□□□ -1.38
USP16-201ENST00000334352 ARHGAP12Q8IWW6 846 aa6.46□□□□□ -1.38
USP16-201ENST00000334352 ARL10Q8N8L6 244 aa6.46□□□□□ -1.38
USP16-201ENST00000334352 ZNF248Q8NDW4 579 aa6.46□□□□□ -1.38
USP16-201ENST00000334352 ADAM32Q8TC27 787 aa6.46□□□□□ -1.38
USP16-201ENST00000334352 PSKH2Q96QS6 385 aa6.46□□□□□ -1.38
USP16-201ENST00000334352 NUDCD1Q96RS6 583 aa6.46□□□□□ -1.38
USP16-201ENST00000334352 MGME1Q9BQP7 344 aa6.46□□□□□ -1.38
USP16-201ENST00000334352 CDH19Q9H159 772 aa6.46□□□□□ -1.38
USP16-201ENST00000334352 ADAM22Q9P0K1 906 aa6.46□□□□□ -1.38
USP16-201ENST00000334352 PCDHGA3Q9Y5H0 932 aa6.46□□□□□ -1.38
USP16-201ENST00000334352 GOLGA6L3A6NEY3 463 aa6.46□□□□□ -1.38
USP16-201ENST00000334352 RASA4BC9J798 803 aa6.46□□□□□ -1.38
USP16-201ENST00000334352 CCP110O43303 1012 aa6.46□□□□□ -1.38
USP16-201ENST00000334352 AQP9O43315 295 aa6.46□□□□□ -1.38
USP16-201ENST00000334352 RASA4O43374 803 aa6.46□□□□□ -1.38
USP16-201ENST00000334352 FZD6O60353 706 aa6.46□□□□□ -1.38
USP16-201ENST00000334352 KCNJ13O60928 360 aa6.46□□□□□ -1.38
USP16-201ENST00000334352 MOCS2O96007 188 aaPredicted RBP6.46□□□□□ -1.38
USP16-201ENST00000334352 RALGDSQ12967 914 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms