RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 LSAMPQ13449 338 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 IRF5Q13568 498 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 PAN2Q504Q3 1202 aaKnown RBP12.47□□□□□ -0.41
VPS33B-201ENST00000333371 RBM20Q5T481 1227 aaKnown RBP12.47□□□□□ -0.41
VPS33B-201ENST00000333371 IL23RQ5VWK5 629 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 ARMC3Q5W041 872 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 TWF2Q6IBS0 349 aaKnown RBP12.47□□□□□ -0.41
VPS33B-201ENST00000333371 PDZD4Q76G19 769 aaPredicted RBP12.47□□□□□ -0.41
VPS33B-201ENST00000333371 FAM35AQ86V20 835 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 C3orf58Q8NDZ4 430 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 HMGCLL1Q8TB92 370 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 RNF34Q969K3 372 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 MPP4Q96JB8 637 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 SENP8Q96LD8 212 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 TSNARE1Q96NA8 513 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 HAPLN3Q96S86 360 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 PRPF18Q99633 342 aaKnown RBP12.47□□□□□ -0.41
VPS33B-201ENST00000333371 EPAS1Q99814 870 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 FICDQ9BVA6 458 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 PRDM16Q9HAZ2 1276 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 CHST12Q9NRB3 414 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 ACOT9Q9Y305 439 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 NYNRINQ9P2P1 1898 aaKnown RBP12.46□□□□□ -0.41
VPS33B-201ENST00000333371 VILLO15195 856 aa12.46□□□□□ -0.41
VPS33B-201ENST00000333371 TRPA1O75762 1119 aa12.46□□□□□ -0.41
VPS33B-201ENST00000333371 KCNE1P15382 129 aa12.46□□□□□ -0.41
VPS33B-201ENST00000333371 ME2P23368 584 aa12.46□□□□□ -0.41
VPS33B-201ENST00000333371 PNPLA4P41247 253 aa12.46□□□□□ -0.41
VPS33B-201ENST00000333371 SLC1A2P43004 574 aa12.46□□□□□ -0.41
VPS33B-201ENST00000333371 SLC12A1Q13621 1099 aa12.46□□□□□ -0.41
VPS33B-201ENST00000333371 NADK2Q4G0N4 442 aa12.46□□□□□ -0.41
VPS33B-201ENST00000333371 ITPRIPL1Q6GPH6 555 aa12.46□□□□□ -0.41
VPS33B-201ENST00000333371 LAYNQ6UX15 382 aa12.46□□□□□ -0.41
VPS33B-201ENST00000333371 BHLHA9Q7RTU4 235 aa12.46□□□□□ -0.41
VPS33B-201ENST00000333371 TAC4Q86UU9 113 aa12.46□□□□□ -0.41
VPS33B-201ENST00000333371 RASAL3Q86YV0 1011 aa12.46□□□□□ -0.41
VPS33B-201ENST00000333371 PGAM4Q8N0Y7 254 aa12.46□□□□□ -0.41
VPS33B-201ENST00000333371 MARVELD2Q8N4S9 558 aa12.46□□□□□ -0.41
VPS33B-201ENST00000333371 HEXDCQ8WVB3 486 aa12.46□□□□□ -0.41
VPS33B-201ENST00000333371 DPF3Q92784 378 aa12.46□□□□□ -0.41
VPS33B-201ENST00000333371 NTAN1Q96AB6 310 aa12.46□□□□□ -0.41
VPS33B-201ENST00000333371 ELMO2Q96JJ3 720 aa12.46□□□□□ -0.41
VPS33B-201ENST00000333371 POMKQ9H5K3 350 aa12.46□□□□□ -0.41
VPS33B-201ENST00000333371 NUDT5Q9UKK9 219 aa12.46□□□□□ -0.41
VPS33B-201ENST00000333371 SDHDO14521 159 aa12.46□□□□□ -0.42
VPS33B-201ENST00000333371 TNPO2O14787 897 aaKnown RBP12.46□□□□□ -0.42
VPS33B-201ENST00000333371 RPS6KA3P51812 740 aa12.46□□□□□ -0.42
VPS33B-201ENST00000333371 SCAPQ12770 1279 aa12.46□□□□□ -0.42
VPS33B-201ENST00000333371 CSHL1Q14406 222 aa12.46□□□□□ -0.42
VPS33B-201ENST00000333371 RARS2Q5T160 578 aaKnown RBP12.46□□□□□ -0.42
VPS33B-201ENST00000333371 TOP6BLQ8N6T0 577 aa12.46□□□□□ -0.42
VPS33B-201ENST00000333371 FAM110BQ8TC76 370 aa12.46□□□□□ -0.42
VPS33B-201ENST00000333371 LPPQ93052 612 aa12.46□□□□□ -0.42
VPS33B-201ENST00000333371 PRICKLE1Q96MT3 831 aaPredicted RBP12.46□□□□□ -0.42
VPS33B-201ENST00000333371 KIFC1Q9BW19 673 aa12.46□□□□□ -0.42
VPS33B-201ENST00000333371 DNAI2Q9GZS0 605 aa12.46□□□□□ -0.42
VPS33B-201ENST00000333371 CCL22O00626 93 aa12.45□□□□□ -0.42
VPS33B-201ENST00000333371 ACOT8O14734 319 aa12.45□□□□□ -0.42
VPS33B-201ENST00000333371 DENRO43583 198 aaKnown RBP12.45□□□□□ -0.42
VPS33B-201ENST00000333371 CLPTM1O96005 669 aa12.45□□□□□ -0.42
VPS33B-201ENST00000333371 RAB10P61026 200 aa12.45□□□□□ -0.42
VPS33B-201ENST00000333371 SEPT6Q14141 434 aa12.45□□□□□ -0.42
VPS33B-201ENST00000333371 FSCN1Q16658 493 aaKnown RBP12.45□□□□□ -0.42
VPS33B-201ENST00000333371 ZNF470Q6ECI4 717 aa12.45□□□□□ -0.42
VPS33B-201ENST00000333371 NAPEPLDQ6IQ20 393 aa12.45□□□□□ -0.42
VPS33B-201ENST00000333371 DENND5AQ6IQ26 1287 aa12.45□□□□□ -0.42
VPS33B-201ENST00000333371 TICAM1Q8IUC6 712 aa12.45□□□□□ -0.42
VPS33B-201ENST00000333371 CPSF7Q8N684 471 aaKnown RBP12.45□□□□□ -0.42
VPS33B-201ENST00000333371 CCDC28BQ9BUN5 200 aa12.45□□□□□ -0.42
VPS33B-201ENST00000333371 DDX18Q9NVP1 670 aaKnown RBP12.45□□□□□ -0.42
VPS33B-201ENST00000333371 TRHDEQ9UKU6 1024 aa12.45□□□□□ -0.42
VPS33B-201ENST00000333371 COMMD3-BMI1R4GMX3 469 aa12.45□□□□□ -0.42
VPS33B-201ENST00000333371 MAGEB16A2A368 324 aa12.45□□□□□ -0.42
VPS33B-201ENST00000333371 ERI2A8K979 691 aaKnown RBP12.45□□□□□ -0.42
VPS33B-201ENST00000333371 E7ENX8 843 aa12.45□□□□□ -0.42
VPS33B-201ENST00000333371 HAS3O00219 553 aa12.45□□□□□ -0.42
VPS33B-201ENST00000333371 GABRDO14764 452 aa12.45□□□□□ -0.42
VPS33B-201ENST00000333371 H2AFYO75367 372 aaKnown RBP12.45□□□□□ -0.42
VPS33B-201ENST00000333371 STMN1P16949 149 aa12.45□□□□□ -0.42
VPS33B-201ENST00000333371 ARCN1P48444 511 aaKnown RBP12.45□□□□□ -0.42
VPS33B-201ENST00000333371 PGFP49763 221 aa12.45□□□□□ -0.42
VPS33B-201ENST00000333371 CLCNKBP51801 687 aa12.45□□□□□ -0.42
VPS33B-201ENST00000333371 CRYBB1P53674 252 aaPredicted RBP12.45□□□□□ -0.42
VPS33B-201ENST00000333371 C1QTNF8P60827 252 aa12.45□□□□□ -0.42
VPS33B-201ENST00000333371 LAMB3Q13751 1172 aa12.45□□□□□ -0.42
VPS33B-201ENST00000333371 PTK2BQ14289 1009 aa12.45□□□□□ -0.42
VPS33B-201ENST00000333371 PCSK7Q16549 785 aa12.45□□□□□ -0.42
VPS33B-201ENST00000333371 PKN3Q6P5Z2 889 aa12.45□□□□□ -0.42
VPS33B-201ENST00000333371 CYP2R1Q6VVX0 501 aa12.45□□□□□ -0.42
VPS33B-201ENST00000333371 TRIM67Q6ZTA4 783 aa12.45□□□□□ -0.42
VPS33B-201ENST00000333371 OR9I1Q8NGQ6 314 aa12.45□□□□□ -0.42
VPS33B-201ENST00000333371 PDCD6IPQ8WUM4 868 aaKnown RBP12.45□□□□□ -0.42
VPS33B-201ENST00000333371 SLC9A7Q96T83 725 aa12.45□□□□□ -0.42
VPS33B-201ENST00000333371 TBL1YQ9BQ87 522 aa12.45□□□□□ -0.42
VPS33B-201ENST00000333371 SLC39A3Q9BRY0 314 aa12.45□□□□□ -0.42
VPS33B-201ENST00000333371 EFCAB1Q9HAE3 211 aa12.45□□□□□ -0.42
VPS33B-201ENST00000333371 CCDC167Q9P0B6 97 aa12.45□□□□□ -0.42
VPS33B-201ENST00000333371 PRSS51A0A1B0GVH4 220 aa12.44□□□□□ -0.42
VPS33B-201ENST00000333371 ATP6AP2A0A1C7CYW4 349 aa12.44□□□□□ -0.42
VPS33B-201ENST00000333371 ANKRD33BA6NCL7 494 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms