RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 NTAN1Q96AB6 310 aa16.07■□□□□ 0.16
PDGFB-201ENST00000331163 ZBP1Q9H171 429 aa16.07■□□□□ 0.16
PDGFB-201ENST00000331163 PNPLA8Q9NP80 782 aa16.07■□□□□ 0.16
PDGFB-201ENST00000331163 SLCO3A1Q9UIG8 710 aa16.07■□□□□ 0.16
PDGFB-201ENST00000331163 NUMA1Q14980 2115 aa16.07■□□□□ 0.16
PDGFB-201ENST00000331163 COPEO14579 308 aa16.07■□□□□ 0.16
PDGFB-201ENST00000331163 SCAMP1O15126 338 aa16.07■□□□□ 0.16
PDGFB-201ENST00000331163 PHGDHO43175 533 aaKnown RBP16.07■□□□□ 0.16
PDGFB-201ENST00000331163 KRT37O76014 449 aa16.07■□□□□ 0.16
PDGFB-201ENST00000331163 ANXA9O76027 345 aa16.07■□□□□ 0.16
PDGFB-201ENST00000331163 TOP3BO95985 862 aaKnown RBP16.07■□□□□ 0.16
PDGFB-201ENST00000331163 PYGBP11216 843 aa16.07■□□□□ 0.16
PDGFB-201ENST00000331163 ATP5DP30049 168 aa16.07■□□□□ 0.16
PDGFB-201ENST00000331163 FDFT1P37268 417 aa16.07■□□□□ 0.16
PDGFB-201ENST00000331163 SEC13P55735 322 aa16.07■□□□□ 0.16
PDGFB-201ENST00000331163 ST8SIA6P61647 398 aa16.07■□□□□ 0.16
PDGFB-201ENST00000331163 NSUN2Q08J23 767 aaKnown RBP eCLIP16.07■□□□□ 0.16
PDGFB-201ENST00000331163 TCEAL1Q15170 157 aa16.07■□□□□ 0.16
PDGFB-201ENST00000331163 NADSYN1Q6IA69 706 aa16.07■□□□□ 0.16
PDGFB-201ENST00000331163 CEP128Q6ZU80 1094 aa16.07■□□□□ 0.16
PDGFB-201ENST00000331163 PGBD3Q8N328 593 aa16.07■□□□□ 0.16
PDGFB-201ENST00000331163 PGM2Q96G03 612 aa16.07■□□□□ 0.16
PDGFB-201ENST00000331163 HAPLN3Q96S86 360 aa16.07■□□□□ 0.16
PDGFB-201ENST00000331163 AGAP2Q99490 1192 aa16.07■□□□□ 0.16
PDGFB-201ENST00000331163 GLOD4Q9HC38 313 aa16.07■□□□□ 0.16
PDGFB-201ENST00000331163 DNMT3BQ9UBC3 853 aaKnown RBP16.07■□□□□ 0.16
PDGFB-201ENST00000331163 DCTN4Q9UJW0 460 aa16.07■□□□□ 0.16
PDGFB-201ENST00000331163 PLA2G4CQ9UP65 541 aa16.07■□□□□ 0.16
PDGFB-201ENST00000331163 MYOFQ9NZM1 2061 aa16.07■□□□□ 0.16
PDGFB-201ENST00000331163 DCLK1O15075 740 aa16.06■□□□□ 0.16
PDGFB-201ENST00000331163 NCAM2O15394 837 aa16.06■□□□□ 0.16
PDGFB-201ENST00000331163 IVDP26440 423 aa16.06■□□□□ 0.16
PDGFB-201ENST00000331163 ZBTB16Q05516 673 aa16.06■□□□□ 0.16
PDGFB-201ENST00000331163 ZNF470Q6ECI4 717 aa16.06■□□□□ 0.16
PDGFB-201ENST00000331163 TMEM154Q6P9G4 183 aa16.06■□□□□ 0.16
PDGFB-201ENST00000331163 SLC30A9Q6PML9 568 aa16.06■□□□□ 0.16
PDGFB-201ENST00000331163 C12orf50Q8NA57 414 aaPredicted RBP16.06■□□□□ 0.16
PDGFB-201ENST00000331163 PPHLN1Q8NEY8 458 aaKnown RBP16.06■□□□□ 0.16
PDGFB-201ENST00000331163 PKMYT1Q99640 499 aa16.06■□□□□ 0.16
PDGFB-201ENST00000331163 CLEC4EQ9ULY5 219 aa16.06■□□□□ 0.16
PDGFB-201ENST00000331163 ENTPD5O75356 428 aa16.06■□□□□ 0.16
PDGFB-201ENST00000331163 CBX6O95503 412 aa16.06■□□□□ 0.16
PDGFB-201ENST00000331163 UGT2B4P06133 528 aa16.06■□□□□ 0.16
PDGFB-201ENST00000331163 FAM163BP0C2L3 166 aa16.06■□□□□ 0.16
PDGFB-201ENST00000331163 HLA-EP13747 358 aa16.06■□□□□ 0.16
PDGFB-201ENST00000331163 DPYSQ14117 519 aa16.06■□□□□ 0.16
PDGFB-201ENST00000331163 SLC5A9Q2M3M2 681 aa16.06■□□□□ 0.16
PDGFB-201ENST00000331163 TIGD7Q6NT04 549 aaPredicted RBP16.06■□□□□ 0.16
PDGFB-201ENST00000331163 CMC1Q7Z7K0 106 aa16.06■□□□□ 0.16
PDGFB-201ENST00000331163 APCDD1Q8J025 514 aa16.06■□□□□ 0.16
PDGFB-201ENST00000331163 TTC30BQ8N4P2 665 aa16.06■□□□□ 0.16
PDGFB-201ENST00000331163 CNTD1Q8N815 330 aa16.06■□□□□ 0.16
PDGFB-201ENST00000331163 TIFAQ96CG3 184 aa16.06■□□□□ 0.16
PDGFB-201ENST00000331163 OXNAD1Q96HP4 312 aaPredicted RBP16.06■□□□□ 0.16
PDGFB-201ENST00000331163 FAM111AQ96PZ2 611 aa16.06■□□□□ 0.16
PDGFB-201ENST00000331163 TBL1YQ9BQ87 522 aa16.06■□□□□ 0.16
PDGFB-201ENST00000331163 POLR1EQ9GZS1 481 aaKnown RBP16.06■□□□□ 0.16
PDGFB-201ENST00000331163 TLK1Q9UKI8 766 aa16.06■□□□□ 0.16
PDGFB-201ENST00000331163 AXIN1O15169 862 aa16.06■□□□□ 0.16
PDGFB-201ENST00000331163 CEBPBP17676 345 aa16.06■□□□□ 0.16
PDGFB-201ENST00000331163 KCNA5P22460 613 aa16.06■□□□□ 0.16
PDGFB-201ENST00000331163 USP10Q14694 798 aaKnown RBP16.06■□□□□ 0.16
PDGFB-201ENST00000331163 C2orf27AQ580R0 203 aa16.06■□□□□ 0.16
PDGFB-201ENST00000331163 ARMC12Q5T9G4 340 aa16.06■□□□□ 0.16
PDGFB-201ENST00000331163 BHLHA9Q7RTU4 235 aa16.06■□□□□ 0.16
PDGFB-201ENST00000331163 OR52K2Q8NGK3 314 aa16.06■□□□□ 0.16
PDGFB-201ENST00000331163 TTC25Q96NG3 672 aa16.06■□□□□ 0.16
PDGFB-201ENST00000331163 XAB2Q9HCS7 855 aaKnown RBP16.06■□□□□ 0.16
PDGFB-201ENST00000331163 SLCO1B3Q9NPD5 702 aa16.06■□□□□ 0.16
PDGFB-201ENST00000331163 SLC2A6Q9UGQ3 507 aa16.06■□□□□ 0.16
PDGFB-201ENST00000331163 BCLAF3A2AJT9 711 aaKnown RBP16.05■□□□□ 0.16
PDGFB-201ENST00000331163 LINC01565O15544 149 aa16.05■□□□□ 0.16
PDGFB-201ENST00000331163 ESRP1Q6NXG1 681 aaKnown RBP16.05■□□□□ 0.16
PDGFB-201ENST00000331163 UNC5AQ6ZN44 842 aa16.05■□□□□ 0.16
PDGFB-201ENST00000331163 TCEAL8Q8IYN2 117 aa16.05■□□□□ 0.16
PDGFB-201ENST00000331163 LZTR1Q8N653 840 aa16.05■□□□□ 0.16
PDGFB-201ENST00000331163 CENPTQ96BT3 561 aa16.05■□□□□ 0.16
PDGFB-201ENST00000331163 CDK5RAP1Q96SZ6 601 aaKnown RBP16.05■□□□□ 0.16
PDGFB-201ENST00000331163 TDRD15B5MCY1 1934 aaKnown RBP16.05■□□□□ 0.16
PDGFB-201ENST00000331163 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.05■□□□□ 0.16
PDGFB-201ENST00000331163 A0A1B0GVM2 712 aa16.05■□□□□ 0.16
PDGFB-201ENST00000331163 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.05■□□□□ 0.16
PDGFB-201ENST00000331163 TCAF2A6NFQ2 919 aa16.05■□□□□ 0.16
PDGFB-201ENST00000331163 CXorf49A8MYA2 514 aaPredicted RBP16.05■□□□□ 0.16
PDGFB-201ENST00000331163 GEMP55040 296 aa16.05■□□□□ 0.16
PDGFB-201ENST00000331163 GEMIN4P57678 1058 aaKnown RBP16.05■□□□□ 0.16
PDGFB-201ENST00000331163 OVGP1Q12889 678 aa16.05■□□□□ 0.16
PDGFB-201ENST00000331163 STAT4Q14765 748 aa16.05■□□□□ 0.16
PDGFB-201ENST00000331163 FBXO48Q5FWF7 155 aa16.05■□□□□ 0.16
PDGFB-201ENST00000331163 RETSATQ6NUM9 610 aa16.05■□□□□ 0.16
PDGFB-201ENST00000331163 NAPRTQ6XQN6 538 aa16.05■□□□□ 0.16
PDGFB-201ENST00000331163 WFDC5Q8TCV5 224 aa16.05■□□□□ 0.16
PDGFB-201ENST00000331163 VWCEQ96DN2 955 aa16.05■□□□□ 0.16
PDGFB-201ENST00000331163 ELMO2Q96JJ3 720 aa16.05■□□□□ 0.16
PDGFB-201ENST00000331163 FBXO6Q9NRD1 293 aaPredicted RBP16.05■□□□□ 0.16
PDGFB-201ENST00000331163 DUS2Q9NX74 493 aaKnown RBP16.05■□□□□ 0.16
PDGFB-201ENST00000331163 GTSE1Q9NYZ3 720 aa16.05■□□□□ 0.16
PDGFB-201ENST00000331163 EFR3BQ9Y2G0 817 aa16.05■□□□□ 0.16
PDGFB-201ENST00000331163 AAR2Q9Y312 384 aaKnown RBP16.05■□□□□ 0.16
PDGFB-201ENST00000331163 TRIOO75962 3097 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms