RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 KCNT2Q6UVM3 1135 aa17.4■□□□□ 0.38
SCAMP4-201ENST00000316097 CES3Q6UWW8 571 aa17.4■□□□□ 0.38
SCAMP4-201ENST00000316097 TRIM67Q6ZTA4 783 aa17.4■□□□□ 0.38
SCAMP4-201ENST00000316097 ZDHHC17Q8IUH5 632 aa17.4■□□□□ 0.38
SCAMP4-201ENST00000316097 TMEM126BQ8IUX1 230 aa17.4■□□□□ 0.38
SCAMP4-201ENST00000316097 ALDH16A1Q8IZ83 802 aa17.4■□□□□ 0.38
SCAMP4-201ENST00000316097 NUP93Q8N1F7 819 aa17.4■□□□□ 0.38
SCAMP4-201ENST00000316097 DHX35Q9H5Z1 703 aaKnown RBP17.4■□□□□ 0.38
SCAMP4-201ENST00000316097 ACSS2Q9NR19 701 aa17.4■□□□□ 0.38
SCAMP4-201ENST00000316097 SNX15Q9NRS6 342 aa17.4■□□□□ 0.38
SCAMP4-201ENST00000316097 CDH9Q9ULB4 789 aa17.4■□□□□ 0.38
SCAMP4-201ENST00000316097 RGSL1A5PLK6 1076 aa17.4■□□□□ 0.38
SCAMP4-201ENST00000316097 DPYSL4O14531 572 aa17.4■□□□□ 0.38
SCAMP4-201ENST00000316097 ENPP3O14638 875 aa17.4■□□□□ 0.38
SCAMP4-201ENST00000316097 F7P08709 466 aaPredicted RBP17.4■□□□□ 0.38
SCAMP4-201ENST00000316097 ERVK-10P10266 1014 aa17.4■□□□□ 0.38
SCAMP4-201ENST00000316097 PSMC3P17980 439 aa17.4■□□□□ 0.38
SCAMP4-201ENST00000316097 ACADSBP45954 432 aa17.4■□□□□ 0.38
SCAMP4-201ENST00000316097 HSPA13P48723 471 aa17.4■□□□□ 0.38
SCAMP4-201ENST00000316097 SNX16P57768 344 aa17.4■□□□□ 0.38
SCAMP4-201ENST00000316097 ARHGEF6Q15052 776 aa17.4■□□□□ 0.38
SCAMP4-201ENST00000316097 METTL21CQ5VZV1 264 aa17.4■□□□□ 0.38
SCAMP4-201ENST00000316097 EDEM1Q92611 657 aa17.4■□□□□ 0.38
SCAMP4-201ENST00000316097 MOCOSQ96EN8 888 aa17.4■□□□□ 0.38
SCAMP4-201ENST00000316097 CCT7Q99832 543 aa17.4■□□□□ 0.38
SCAMP4-201ENST00000316097 C11orf84Q9BUA3 381 aaPredicted RBP17.4■□□□□ 0.38
SCAMP4-201ENST00000316097 MTMR10Q9NXD2 777 aa17.4■□□□□ 0.38
SCAMP4-201ENST00000316097 SQORQ9Y6N5 450 aa17.4■□□□□ 0.38
SCAMP4-201ENST00000316097 TET1Q8NFU7 2136 aa17.4■□□□□ 0.38
SCAMP4-201ENST00000316097 NT5C1B-RDH14C9J2C7 533 aa17.39■□□□□ 0.37
SCAMP4-201ENST00000316097 STX16-NPEPL1H3BU86 382 aa17.39■□□□□ 0.37
SCAMP4-201ENST00000316097 FYNP06241 537 aa17.39■□□□□ 0.37
SCAMP4-201ENST00000316097 MAGEA8P43361 318 aa17.39■□□□□ 0.37
SCAMP4-201ENST00000316097 SULT1E1P49888 294 aa17.39■□□□□ 0.37
SCAMP4-201ENST00000316097 NRF1Q16656 503 aa17.39■□□□□ 0.37
SCAMP4-201ENST00000316097 HEATR6Q6AI08 1181 aaKnown RBP17.39■□□□□ 0.37
SCAMP4-201ENST00000316097 KLHL35Q6PF15 583 aa17.39■□□□□ 0.37
SCAMP4-201ENST00000316097 DCLRE1AQ6PJP8 1040 aa17.39■□□□□ 0.37
SCAMP4-201ENST00000316097 TRIML2Q8N7C3 387 aa17.39■□□□□ 0.37
SCAMP4-201ENST00000316097 KLHL32Q96NJ5 620 aa17.39■□□□□ 0.37
SCAMP4-201ENST00000316097 RSL24D1Q9UHA3 163 aaKnown RBP17.39■□□□□ 0.37
SCAMP4-201ENST00000316097 BCAP29Q9UHQ4 241 aa17.39■□□□□ 0.37
SCAMP4-201ENST00000316097 MFHAS1Q9Y4C4 1052 aa17.39■□□□□ 0.37
SCAMP4-201ENST00000316097 PRSS51A0A1B0GVH4 220 aa17.39■□□□□ 0.37
SCAMP4-201ENST00000316097 CCL5P13501 91 aa17.39■□□□□ 0.37
SCAMP4-201ENST00000316097 TCN1P20061 433 aaPredicted RBP17.39■□□□□ 0.37
SCAMP4-201ENST00000316097 MATKP42679 507 aa17.39■□□□□ 0.37
SCAMP4-201ENST00000316097 CLCN2P51788 898 aa17.39■□□□□ 0.37
SCAMP4-201ENST00000316097 FAM189BP81408 668 aa17.39■□□□□ 0.37
SCAMP4-201ENST00000316097 CCDC153Q494R4 210 aa17.39■□□□□ 0.37
SCAMP4-201ENST00000316097 OTUD1Q5VV17 481 aaPredicted RBP17.39■□□□□ 0.37
SCAMP4-201ENST00000316097 DEFB128Q7Z7B8 93 aa17.39■□□□□ 0.37
SCAMP4-201ENST00000316097 METTL23Q86XA0 190 aa17.39■□□□□ 0.37
SCAMP4-201ENST00000316097 TSPAN14Q8NG11 270 aa17.39■□□□□ 0.37
SCAMP4-201ENST00000316097 SCAMP5Q8TAC9 235 aa17.39■□□□□ 0.37
SCAMP4-201ENST00000316097 TMIGD2Q96BF3 282 aa17.39■□□□□ 0.37
SCAMP4-201ENST00000316097 ZNF670Q9BS34 389 aa17.39■□□□□ 0.37
SCAMP4-201ENST00000316097 M0QZQ0 153 aa17.38■□□□□ 0.37
SCAMP4-201ENST00000316097 EOMESO95936 686 aa17.38■□□□□ 0.37
SCAMP4-201ENST00000316097 NELFEP18615 380 aaKnown RBP17.38■□□□□ 0.37
SCAMP4-201ENST00000316097 MPSTP25325 297 aa17.38■□□□□ 0.37
SCAMP4-201ENST00000316097 EPHA3P29320 983 aa17.38■□□□□ 0.37
SCAMP4-201ENST00000316097 DPP6P42658 865 aa17.38■□□□□ 0.37
SCAMP4-201ENST00000316097 LRRC8BQ6P9F7 803 aa17.38■□□□□ 0.37
SCAMP4-201ENST00000316097 ZNF554Q86TJ5 538 aa17.38■□□□□ 0.37
SCAMP4-201ENST00000316097 PDCD6IPQ8WUM4 868 aaKnown RBP17.38■□□□□ 0.37
SCAMP4-201ENST00000316097 PGLYRP2Q96PD5 576 aa17.38■□□□□ 0.37
SCAMP4-201ENST00000316097 SLC2A11Q9BYW1 496 aa17.38■□□□□ 0.37
SCAMP4-201ENST00000316097 PAK6Q9NQU5 681 aaPredicted RBP17.38■□□□□ 0.37
SCAMP4-201ENST00000316097 HHLA1C9JL84 531 aa17.38■□□□□ 0.37
SCAMP4-201ENST00000316097 M0QYT0 321 aa17.38■□□□□ 0.37
SCAMP4-201ENST00000316097 PCSK1P29120 753 aa17.38■□□□□ 0.37
SCAMP4-201ENST00000316097 NUMBP49757 651 aa17.38■□□□□ 0.37
SCAMP4-201ENST00000316097 ADRM1Q16186 407 aa17.38■□□□□ 0.37
SCAMP4-201ENST00000316097 LSM12Q3MHD2 195 aaKnown RBP17.38■□□□□ 0.37
SCAMP4-201ENST00000316097 INTS6LQ5JSJ4 861 aaKnown RBP17.38■□□□□ 0.37
SCAMP4-201ENST00000316097 SDHAF4Q5VUM1 108 aa17.38■□□□□ 0.37
SCAMP4-201ENST00000316097 COLGALT2Q8IYK4 626 aa17.38■□□□□ 0.37
SCAMP4-201ENST00000316097 DCLK2Q8N568 766 aa17.38■□□□□ 0.37
SCAMP4-201ENST00000316097 FAM156AQ8NDB6 213 aa17.38■□□□□ 0.37
SCAMP4-201ENST00000316097 ARNTL2Q8WYA1 636 aa17.38■□□□□ 0.37
SCAMP4-201ENST00000316097 CENPIQ92674 756 aaPredicted RBP17.38■□□□□ 0.37
SCAMP4-201ENST00000316097 ZNF512Q96ME7 567 aaPredicted RBP17.38■□□□□ 0.37
SCAMP4-201ENST00000316097 ACBD6Q9BR61 282 aa17.38■□□□□ 0.37
SCAMP4-201ENST00000316097 DNAI2Q9GZS0 605 aa17.38■□□□□ 0.37
SCAMP4-201ENST00000316097 PADI4Q9UM07 663 aa17.38■□□□□ 0.37
SCAMP4-201ENST00000316097 TDRD15B5MCY1 1934 aaKnown RBP17.38■□□□□ 0.37
SCAMP4-201ENST00000316097 RNASEH2AO75792 299 aaKnown RBP17.37■□□□□ 0.37
SCAMP4-201ENST00000316097 CHRNGP07510 517 aa17.37■□□□□ 0.37
SCAMP4-201ENST00000316097 PGAM1P18669 254 aa17.37■□□□□ 0.37
SCAMP4-201ENST00000316097 ME2P23368 584 aa17.37■□□□□ 0.37
SCAMP4-201ENST00000316097 GARSP41250 739 aaKnown RBP17.37■□□□□ 0.37
SCAMP4-201ENST00000316097 PTPN9P43378 593 aa17.37■□□□□ 0.37
SCAMP4-201ENST00000316097 RP9Q8TA86 221 aaKnown RBP17.37■□□□□ 0.37
SCAMP4-201ENST00000316097 EME1Q96AY2 570 aa17.37■□□□□ 0.37
SCAMP4-201ENST00000316097 WDR41Q9HAD4 459 aa17.37■□□□□ 0.37
SCAMP4-201ENST00000316097 SYBUQ9NX95 663 aa17.37■□□□□ 0.37
SCAMP4-201ENST00000316097 FAF1Q9UNN5 650 aaPredicted RBP17.37■□□□□ 0.37
SCAMP4-201ENST00000316097 AP4E1Q9UPM8 1137 aa17.37■□□□□ 0.37
SCAMP4-201ENST00000316097 CYP2C18P33260 490 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms