RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 SF3A2Q15428 464 aaKnown RBP20.08■□□□□ 0.81
VEGFB-201ENST00000309422 CYTH1Q15438 398 aa20.08■□□□□ 0.81
VEGFB-201ENST00000309422 SLC23A3Q6PIS1 610 aa20.08■□□□□ 0.81
VEGFB-201ENST00000309422 ARHGAP36Q6ZRI8 547 aa20.08■□□□□ 0.81
VEGFB-201ENST00000309422 PEX26Q7Z412 305 aa20.08■□□□□ 0.81
VEGFB-201ENST00000309422 ARRDC3Q96B67 414 aa20.08■□□□□ 0.81
VEGFB-201ENST00000309422 KLHL32Q96NJ5 620 aa20.08■□□□□ 0.81
VEGFB-201ENST00000309422 ALS2CR12Q96Q35 445 aa20.08■□□□□ 0.81
VEGFB-201ENST00000309422 PSKH2Q96QS6 385 aa20.08■□□□□ 0.81
VEGFB-201ENST00000309422 FERMT1Q9BQL6 677 aa20.08■□□□□ 0.81
VEGFB-201ENST00000309422 CPEB1Q9BZB8 566 aaKnown RBP20.08■□□□□ 0.81
VEGFB-201ENST00000309422 ZDHHC5Q9C0B5 715 aa20.08■□□□□ 0.81
VEGFB-201ENST00000309422 GOLPH3Q9H4A6 298 aa20.08■□□□□ 0.81
VEGFB-201ENST00000309422 SCUBE2Q9NQ36 999 aa20.08■□□□□ 0.81
VEGFB-201ENST00000309422 LHX3Q9UBR4 397 aa20.08■□□□□ 0.81
VEGFB-201ENST00000309422 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.08■□□□□ 0.81
VEGFB-201ENST00000309422 PIEZO1Q92508 2521 aa20.08■□□□□ 0.81
VEGFB-201ENST00000309422 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.08■□□□□ 0.8
VEGFB-201ENST00000309422 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.08■□□□□ 0.8
VEGFB-201ENST00000309422 PLK4O00444 970 aa20.08■□□□□ 0.8
VEGFB-201ENST00000309422 CA4P22748 312 aa20.08■□□□□ 0.8
VEGFB-201ENST00000309422 MAOBP27338 520 aa20.08■□□□□ 0.8
VEGFB-201ENST00000309422 CSNK1DP48730 415 aa20.08■□□□□ 0.8
VEGFB-201ENST00000309422 SCNN1BP51168 640 aa20.08■□□□□ 0.8
VEGFB-201ENST00000309422 SUOXP51687 545 aa20.08■□□□□ 0.8
VEGFB-201ENST00000309422 C21orf59P57076 290 aa20.08■□□□□ 0.8
VEGFB-201ENST00000309422 ITKQ08881 620 aa20.08■□□□□ 0.8
VEGFB-201ENST00000309422 NSUN2Q08J23 767 aaKnown RBP eCLIP20.08■□□□□ 0.8
VEGFB-201ENST00000309422 TFDP3Q5H9I0 405 aa20.08■□□□□ 0.8
VEGFB-201ENST00000309422 RALGPS1Q5JS13 557 aa20.08■□□□□ 0.8
VEGFB-201ENST00000309422 PIP5KL1Q5T9C9 394 aa20.08■□□□□ 0.8
VEGFB-201ENST00000309422 KAZNQ674X7 775 aa20.08■□□□□ 0.8
VEGFB-201ENST00000309422 KIAA1161Q6NSJ0 714 aa20.08■□□□□ 0.8
VEGFB-201ENST00000309422 ERAP2Q6P179 960 aa20.08■□□□□ 0.8
VEGFB-201ENST00000309422 PARS2Q7L3T8 475 aaKnown RBP20.08■□□□□ 0.8
VEGFB-201ENST00000309422 SRLQ86TD4 932 aa20.08■□□□□ 0.8
VEGFB-201ENST00000309422 TRIM69Q86WT6 500 aa20.08■□□□□ 0.8
VEGFB-201ENST00000309422 LRRC8AQ8IWT6 810 aa20.08■□□□□ 0.8
VEGFB-201ENST00000309422 TSEN2Q8NCE0 465 aaKnown RBP20.08■□□□□ 0.8
VEGFB-201ENST00000309422 EXD1Q8NHP7 514 aa20.08■□□□□ 0.8
VEGFB-201ENST00000309422 ZNF641Q96N77 438 aaPredicted RBP20.08■□□□□ 0.8
VEGFB-201ENST00000309422 LACRTQ9GZZ8 138 aa20.08■□□□□ 0.8
VEGFB-201ENST00000309422 BRD8Q9H0E9 1235 aa20.08■□□□□ 0.8
VEGFB-201ENST00000309422 SMOC1Q9H4F8 434 aa20.08■□□□□ 0.8
VEGFB-201ENST00000309422 AASDHPPTQ9NRN7 309 aa20.08■□□□□ 0.8
VEGFB-201ENST00000309422 DMTF1Q9Y222 760 aa20.08■□□□□ 0.8
VEGFB-201ENST00000309422 EML5Q05BV3 1969 aa20.07■□□□□ 0.8
VEGFB-201ENST00000309422 A0A1W2PQ67 120 aa20.07■□□□□ 0.8
VEGFB-201ENST00000309422 RCCD1A6NED2 376 aa20.07■□□□□ 0.8
VEGFB-201ENST00000309422 C16orf96A6NNT2 1141 aa20.07■□□□□ 0.8
VEGFB-201ENST00000309422 MAFKO60675 156 aa20.07■□□□□ 0.8
VEGFB-201ENST00000309422 KRT10P13645 584 aa20.07■□□□□ 0.8
VEGFB-201ENST00000309422 TGM2P21980 687 aa20.07■□□□□ 0.8
VEGFB-201ENST00000309422 CCNCP24863 283 aa20.07■□□□□ 0.8
VEGFB-201ENST00000309422 CTNNA2P26232 953 aa20.07■□□□□ 0.8
VEGFB-201ENST00000309422 GKP32189 559 aa20.07■□□□□ 0.8
VEGFB-201ENST00000309422 CTNNA1P35221 906 aaKnown RBP20.07■□□□□ 0.8
VEGFB-201ENST00000309422 NR2C2P49116 596 aa20.07■□□□□ 0.8
VEGFB-201ENST00000309422 METAP1P53582 386 aa20.07■□□□□ 0.8
VEGFB-201ENST00000309422 RWDD2BP57060 319 aa20.07■□□□□ 0.8
VEGFB-201ENST00000309422 ELP6Q0PNE2 266 aa20.07■□□□□ 0.8
VEGFB-201ENST00000309422 HNRNPDQ14103 355 aaKnown RBP20.07■□□□□ 0.8
VEGFB-201ENST00000309422 TCEAL6Q6IPX3 200 aa20.07■□□□□ 0.8
VEGFB-201ENST00000309422 BRAT1Q6PJG6 821 aa20.07■□□□□ 0.8
VEGFB-201ENST00000309422 IL27RAQ6UWB1 636 aa20.07■□□□□ 0.8
VEGFB-201ENST00000309422 SPOCD1Q6ZMY3 1216 aa20.07■□□□□ 0.8
VEGFB-201ENST00000309422 TTC7BQ86TV6 843 aa20.07■□□□□ 0.8
VEGFB-201ENST00000309422 CCDC13Q8IYE1 715 aa20.07■□□□□ 0.8
VEGFB-201ENST00000309422 RNF10Q8N5U6 811 aaKnown RBP20.07■□□□□ 0.8
VEGFB-201ENST00000309422 TCEAL3Q969E4 200 aa20.07■□□□□ 0.8
VEGFB-201ENST00000309422 HDAC11Q96DB2 347 aa20.07■□□□□ 0.8
VEGFB-201ENST00000309422 GTPBP2Q9BX10 602 aaKnown RBP20.07■□□□□ 0.8
VEGFB-201ENST00000309422 POLR1EQ9GZS1 481 aaKnown RBP20.07■□□□□ 0.8
VEGFB-201ENST00000309422 TMEM9BQ9NQ34 198 aa20.07■□□□□ 0.8
VEGFB-201ENST00000309422 TMEM74BQ9NUR3 256 aa20.07■□□□□ 0.8
VEGFB-201ENST00000309422 A0A1W2PPC4 97 aa20.06■□□□□ 0.8
VEGFB-201ENST00000309422 MIF4GDA9UHW6 222 aaKnown RBP20.06■□□□□ 0.8
VEGFB-201ENST00000309422 TSPAN6O43657 245 aa20.06■□□□□ 0.8
VEGFB-201ENST00000309422 MAGEC1O60732 1142 aa20.06■□□□□ 0.8
VEGFB-201ENST00000309422 RNGTTO60942 597 aaKnown RBP20.06■□□□□ 0.8
VEGFB-201ENST00000309422 MAP3K6O95382 1288 aa20.06■□□□□ 0.8
VEGFB-201ENST00000309422 COPS2P61201 443 aa20.06■□□□□ 0.8
VEGFB-201ENST00000309422 POLR2LP62875 67 aaKnown RBP20.06■□□□□ 0.8
VEGFB-201ENST00000309422 RPS21P63220 83 aaKnown RBP20.06■□□□□ 0.8
VEGFB-201ENST00000309422 RACK1P63244 317 aaKnown RBP20.06■□□□□ 0.8
VEGFB-201ENST00000309422 GBE1Q04446 702 aa20.06■□□□□ 0.8
VEGFB-201ENST00000309422 SLC10A7Q0GE19 358 aa20.06■□□□□ 0.8
VEGFB-201ENST00000309422 AP1B1Q10567 949 aa20.06■□□□□ 0.8
VEGFB-201ENST00000309422 SLC9A4Q6AI14 798 aa20.06■□□□□ 0.8
VEGFB-201ENST00000309422 MFSD7Q6UXD7 560 aa20.06■□□□□ 0.8
VEGFB-201ENST00000309422 NDUFAF2Q8N183 169 aa20.06■□□□□ 0.8
VEGFB-201ENST00000309422 PQLC3Q8N755 202 aa20.06■□□□□ 0.8
VEGFB-201ENST00000309422 HCAR2Q8TDS4 363 aa20.06■□□□□ 0.8
VEGFB-201ENST00000309422 CXorf40AQ8TE69 158 aa20.06■□□□□ 0.8
VEGFB-201ENST00000309422 UBE2Q2Q8WVN8 375 aa20.06■□□□□ 0.8
VEGFB-201ENST00000309422 P3H4Q92791 437 aa20.06■□□□□ 0.8
VEGFB-201ENST00000309422 FAM131CQ96AQ9 280 aa20.06■□□□□ 0.8
VEGFB-201ENST00000309422 FEM1CQ96JP0 617 aa20.06■□□□□ 0.8
VEGFB-201ENST00000309422 SERAC1Q96JX3 654 aa20.06■□□□□ 0.8
VEGFB-201ENST00000309422 C1QTNF7Q9BXJ2 289 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms