RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 TEDDM1Q5T9Z0 273 aa12.03□□□□□ -0.48
TRIM40-205ENST00000307859 GRTP1Q5TC63 336 aa12.03□□□□□ -0.48
TRIM40-205ENST00000307859 MROH9Q5TGP6 573 aa12.03□□□□□ -0.48
TRIM40-205ENST00000307859 GKAP1Q5VSY0 366 aaPredicted RBP12.03□□□□□ -0.48
TRIM40-205ENST00000307859 HHATQ5VTY9 493 aa12.03□□□□□ -0.48
TRIM40-205ENST00000307859 PLPP4Q5VZY2 271 aa12.03□□□□□ -0.48
TRIM40-205ENST00000307859 IL31Q6EBC2 164 aa12.03□□□□□ -0.48
TRIM40-205ENST00000307859 PIGWQ7Z7B1 504 aa12.03□□□□□ -0.48
TRIM40-205ENST00000307859 SPATS2Q86XZ4 545 aaKnown RBP12.03□□□□□ -0.48
TRIM40-205ENST00000307859 ELMOD1Q8N336 334 aa12.03□□□□□ -0.48
TRIM40-205ENST00000307859 HJURPQ8NCD3 748 aaPredicted RBP12.03□□□□□ -0.48
TRIM40-205ENST00000307859 PPHLN1Q8NEY8 458 aaKnown RBP12.03□□□□□ -0.48
TRIM40-205ENST00000307859 ACMSDQ8TDX5 336 aa12.03□□□□□ -0.48
TRIM40-205ENST00000307859 POF1BQ8WVV4 589 aa12.03□□□□□ -0.48
TRIM40-205ENST00000307859 RANBP9Q96S59 729 aa12.03□□□□□ -0.48
TRIM40-205ENST00000307859 MGME1Q9BQP7 344 aa12.03□□□□□ -0.48
TRIM40-205ENST00000307859 MCMBPQ9BTE3 642 aa12.03□□□□□ -0.48
TRIM40-205ENST00000307859 TLR9Q9NR96 1032 aa12.03□□□□□ -0.48
TRIM40-205ENST00000307859 HAUS2Q9NVX0 235 aa12.03□□□□□ -0.48
TRIM40-205ENST00000307859 IL1RAPL1Q9NZN1 696 aa12.03□□□□□ -0.48
TRIM40-205ENST00000307859 SLC17A7Q9P2U7 560 aa12.03□□□□□ -0.48
TRIM40-205ENST00000307859 MYO7AQ13402 2215 aa12.03□□□□□ -0.48
TRIM40-205ENST00000307859 LOC285095A0A1B0GVY8 99 aa12.02□□□□□ -0.49
TRIM40-205ENST00000307859 LINC01553A4QN01 128 aa12.02□□□□□ -0.49
TRIM40-205ENST00000307859 COPEO14579 308 aa12.02□□□□□ -0.49
TRIM40-205ENST00000307859 MUSKO15146 869 aa12.02□□□□□ -0.49
TRIM40-205ENST00000307859 TSPAN3O60637 253 aa12.02□□□□□ -0.49
TRIM40-205ENST00000307859 ITGA2BP08514 1039 aa12.02□□□□□ -0.49
TRIM40-205ENST00000307859 ADRA1DP25100 572 aa12.02□□□□□ -0.49
TRIM40-205ENST00000307859 CLCN4P51793 760 aa12.02□□□□□ -0.49
TRIM40-205ENST00000307859 EPHA5P54756 1037 aa12.02□□□□□ -0.49
TRIM40-205ENST00000307859 CSE1LP55060 971 aaKnown RBP12.02□□□□□ -0.49
TRIM40-205ENST00000307859 ITKQ08881 620 aa12.02□□□□□ -0.49
TRIM40-205ENST00000307859 MSLNQ13421 630 aaPredicted RBP12.02□□□□□ -0.49
TRIM40-205ENST00000307859 POU6F1Q14863 301 aa12.02□□□□□ -0.49
TRIM40-205ENST00000307859 PCSK7Q16549 785 aa12.02□□□□□ -0.49
TRIM40-205ENST00000307859 PDPK2PQ6A1A2 396 aa12.02□□□□□ -0.49
TRIM40-205ENST00000307859 KCNMB4Q86W47 210 aa12.02□□□□□ -0.49
TRIM40-205ENST00000307859 CACNA2D3Q8IZS8 1091 aa12.02□□□□□ -0.49
TRIM40-205ENST00000307859 BBS5Q8N3I7 341 aa12.02□□□□□ -0.49
TRIM40-205ENST00000307859 CPXM2Q8N436 756 aa12.02□□□□□ -0.49
TRIM40-205ENST00000307859 ISL2Q96A47 359 aa12.02□□□□□ -0.49
TRIM40-205ENST00000307859 SEC16BQ96JE7 1060 aa12.02□□□□□ -0.49
TRIM40-205ENST00000307859 FEM1CQ96JP0 617 aa12.02□□□□□ -0.49
TRIM40-205ENST00000307859 ZNF778Q96MU6 729 aa12.02□□□□□ -0.49
TRIM40-205ENST00000307859 GCNAQ96QF7 691 aa12.02□□□□□ -0.49
TRIM40-205ENST00000307859 PSKH2Q96QS6 385 aa12.02□□□□□ -0.49
TRIM40-205ENST00000307859 RBBP8Q99708 897 aa12.02□□□□□ -0.49
TRIM40-205ENST00000307859 SEMA3CQ99985 751 aa12.02□□□□□ -0.49
TRIM40-205ENST00000307859 PAIP2Q9BPZ3 127 aaKnown RBP12.02□□□□□ -0.49
TRIM40-205ENST00000307859 PRKD2Q9BZL6 878 aa12.02□□□□□ -0.49
TRIM40-205ENST00000307859 VPS11Q9H270 941 aa12.02□□□□□ -0.49
TRIM40-205ENST00000307859 TREX1Q9NSU2 369 aa12.02□□□□□ -0.49
TRIM40-205ENST00000307859 FGFR1OP2Q9NVK5 253 aa12.02□□□□□ -0.49
TRIM40-205ENST00000307859 UBA2Q9UBT2 640 aaPredicted RBP12.02□□□□□ -0.49
TRIM40-205ENST00000307859 SEPT3Q9UH03 358 aa12.02□□□□□ -0.49
TRIM40-205ENST00000307859 ATXN2Q99700 1313 aaKnown RBP12.02□□□□□ -0.49
TRIM40-205ENST00000307859 PRRC2BQ5JSZ5 2229 aaKnown RBP12.01□□□□□ -0.49
TRIM40-205ENST00000307859 TRAV19A0A0A6YYK7 116 aa12.01□□□□□ -0.49
TRIM40-205ENST00000307859 NRG2O14511 850 aaPredicted RBP12.01□□□□□ -0.49
TRIM40-205ENST00000307859 SIN3BO75182 1162 aa12.01□□□□□ -0.49
TRIM40-205ENST00000307859 LUC7L3O95232 432 aaKnown RBP12.01□□□□□ -0.49
TRIM40-205ENST00000307859 ALDOAP04075 364 aaKnown RBP12.01□□□□□ -0.49
TRIM40-205ENST00000307859 CKMP06732 381 aa12.01□□□□□ -0.49
TRIM40-205ENST00000307859 ATXN1LP0C7T5 689 aaKnown RBP12.01□□□□□ -0.49
TRIM40-205ENST00000307859 MAGEA12P43365 314 aa12.01□□□□□ -0.49
TRIM40-205ENST00000307859 SERPINH1P50454 418 aaKnown RBP12.01□□□□□ -0.49
TRIM40-205ENST00000307859 LIMK2P53671 638 aa12.01□□□□□ -0.49
TRIM40-205ENST00000307859 HSP90AA5PQ58FG0 334 aa12.01□□□□□ -0.49
TRIM40-205ENST00000307859 PPM1LQ5SGD2 360 aa12.01□□□□□ -0.49
TRIM40-205ENST00000307859 C6orf89Q6UWU4 347 aa12.01□□□□□ -0.49
TRIM40-205ENST00000307859 CDHR3Q6ZTQ4 885 aa12.01□□□□□ -0.49
TRIM40-205ENST00000307859 HTR3DQ70Z44 454 aa12.01□□□□□ -0.49
TRIM40-205ENST00000307859 CNTN4Q8IWV2 1026 aa12.01□□□□□ -0.49
TRIM40-205ENST00000307859 GJD3Q8N144 294 aa12.01□□□□□ -0.49
TRIM40-205ENST00000307859 MAB21L3Q8N8X9 362 aa12.01□□□□□ -0.49
TRIM40-205ENST00000307859 SLC22A17Q8WUG5 538 aa12.01□□□□□ -0.49
TRIM40-205ENST00000307859 SRPK1Q96SB4 655 aaKnown RBP12.01□□□□□ -0.49
TRIM40-205ENST00000307859 C17orf80Q9BSJ5 609 aa12.01□□□□□ -0.49
TRIM40-205ENST00000307859 ATXN3LQ9H3M9 355 aa12.01□□□□□ -0.49
TRIM40-205ENST00000307859 ASAH2Q9NR71 780 aa12.01□□□□□ -0.49
TRIM40-205ENST00000307859 C20orf96Q9NUD7 363 aaPredicted RBP12.01□□□□□ -0.49
TRIM40-205ENST00000307859 NSMCE4AQ9NXX6 385 aa12.01□□□□□ -0.49
TRIM40-205ENST00000307859 TXNDC16Q9P2K2 825 aa12.01□□□□□ -0.49
TRIM40-205ENST00000307859 LSM7Q9UK45 103 aaKnown RBP12.01□□□□□ -0.49
TRIM40-205ENST00000307859 ZNF510Q9Y2H8 683 aa12.01□□□□□ -0.49
TRIM40-205ENST00000307859 C2orf16Q68DN1 1984 aa12.01□□□□□ -0.49
TRIM40-205ENST00000307859 A0A1W2PRU2 124 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 HEATR9A2RTY3 570 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 CCL16O15467 120 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 TBL1XO60907 577 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 PAPSS2O95340 614 aaPredicted RBP12□□□□□ -0.49
TRIM40-205ENST00000307859 EPOP01588 193 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 CR2P20023 1033 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 GLDCP23378 1020 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 ARNTP27540 789 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 CRHR1P34998 444 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 ARCN1P48444 511 aaKnown RBP12□□□□□ -0.49
TRIM40-205ENST00000307859 SEPT7Q16181 437 aaKnown RBP12□□□□□ -0.49
TRIM40-205ENST00000307859 SIRPB2Q5JXA9 342 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms