RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 OLFML1Q6UWY5 402 aa13.43□□□□□ -0.26
CASC4-201ENST00000299957 C16orf59Q7L2K0 433 aa13.43□□□□□ -0.26
CASC4-201ENST00000299957 HS6ST3Q8IZP7 471 aa13.43□□□□□ -0.26
CASC4-201ENST00000299957 FBXO39Q8N4B4 442 aa13.43□□□□□ -0.26
CASC4-201ENST00000299957 OR6K2Q8NGY2 324 aa13.43□□□□□ -0.26
CASC4-201ENST00000299957 RBBP8Q99708 897 aa13.43□□□□□ -0.26
CASC4-201ENST00000299957 FAM192AQ9GZU8 254 aa13.43□□□□□ -0.26
CASC4-201ENST00000299957 NSMCE4AQ9NXX6 385 aa13.43□□□□□ -0.26
CASC4-201ENST00000299957 UXTQ9UBK9 157 aaPredicted RBP13.43□□□□□ -0.26
CASC4-201ENST00000299957 ZNHIT2Q9UHR6 403 aa13.43□□□□□ -0.26
CASC4-201ENST00000299957 TRMT6Q9UJA5 497 aaKnown RBP13.43□□□□□ -0.26
CASC4-201ENST00000299957 ADAMTS6Q9UKP5 1117 aa13.43□□□□□ -0.26
CASC4-201ENST00000299957 ABT1Q9ULW3 272 aaKnown RBP13.43□□□□□ -0.26
CASC4-201ENST00000299957 M0R3G1 203 aa13.43□□□□□ -0.26
CASC4-201ENST00000299957 NRP1O14786 923 aa13.43□□□□□ -0.26
CASC4-201ENST00000299957 PYGLP06737 847 aa13.43□□□□□ -0.26
CASC4-201ENST00000299957 RBP1P09455 135 aa13.43□□□□□ -0.26
CASC4-201ENST00000299957 UGT1A6P19224 532 aa13.43□□□□□ -0.26
CASC4-201ENST00000299957 LILRA4P59901 499 aa13.43□□□□□ -0.26
CASC4-201ENST00000299957 C9orf131Q5VYM1 1079 aa13.43□□□□□ -0.26
CASC4-201ENST00000299957 GLB1LQ6UWU2 654 aa13.43□□□□□ -0.26
CASC4-201ENST00000299957 SLC26A9Q7LBE3 791 aa13.43□□□□□ -0.26
CASC4-201ENST00000299957 ZDHHC17Q8IUH5 632 aa13.43□□□□□ -0.26
CASC4-201ENST00000299957 SLC44A2Q8IWA5 706 aaPredicted RBP13.43□□□□□ -0.26
CASC4-201ENST00000299957 MICU2Q8IYU8 434 aa13.43□□□□□ -0.26
CASC4-201ENST00000299957 METTL6Q8TCB7 284 aa13.43□□□□□ -0.26
CASC4-201ENST00000299957 MYLPFQ96A32 169 aa13.43□□□□□ -0.26
CASC4-201ENST00000299957 TEPSINQ96N21 525 aa13.43□□□□□ -0.26
CASC4-201ENST00000299957 NR1H4Q96RI1 486 aaPredicted RBP13.43□□□□□ -0.26
CASC4-201ENST00000299957 SEMA3CQ99985 751 aa13.43□□□□□ -0.26
CASC4-201ENST00000299957 TMEM165Q9HC07 324 aa13.43□□□□□ -0.26
CASC4-201ENST00000299957 SLC38A7Q9NVC3 462 aa13.43□□□□□ -0.26
CASC4-201ENST00000299957 LAMB4A4D0S4 1761 aa13.43□□□□□ -0.26
CASC4-201ENST00000299957 TYW5A2RUC4 315 aaKnown RBP13.42□□□□□ -0.26
CASC4-201ENST00000299957 F8W8V4 182 aa13.42□□□□□ -0.26
CASC4-201ENST00000299957 ODC1P11926 461 aa13.42□□□□□ -0.26
CASC4-201ENST00000299957 SLC2A4P14672 509 aa13.42□□□□□ -0.26
CASC4-201ENST00000299957 LIMK2P53671 638 aa13.42□□□□□ -0.26
CASC4-201ENST00000299957 MFSD10Q14728 455 aa13.42□□□□□ -0.26
CASC4-201ENST00000299957 CARTPTQ16568 116 aa13.42□□□□□ -0.26
CASC4-201ENST00000299957 PCID2Q5JVF3 399 aa13.42□□□□□ -0.26
CASC4-201ENST00000299957 CHST15Q7LFX5 561 aaPredicted RBP13.42□□□□□ -0.26
CASC4-201ENST00000299957 CUZD1Q86UP6 607 aa13.42□□□□□ -0.26
CASC4-201ENST00000299957 FAM35AQ86V20 835 aa13.42□□□□□ -0.26
CASC4-201ENST00000299957 FAM126BQ8IXS8 530 aa13.42□□□□□ -0.26
CASC4-201ENST00000299957 NIPA2Q8N8Q9 360 aa13.42□□□□□ -0.26
CASC4-201ENST00000299957 ACMSDQ8TDX5 336 aa13.42□□□□□ -0.26
CASC4-201ENST00000299957 HEXDCQ8WVB3 486 aa13.42□□□□□ -0.26
CASC4-201ENST00000299957 RPL10LQ96L21 214 aaKnown RBP13.42□□□□□ -0.26
CASC4-201ENST00000299957 SMAD5Q99717 465 aaKnown RBP13.42□□□□□ -0.26
CASC4-201ENST00000299957 DUSP16Q9BY84 665 aa13.42□□□□□ -0.26
CASC4-201ENST00000299957 COQ10BQ9H8M1 238 aa13.42□□□□□ -0.26
CASC4-201ENST00000299957 LIMD1Q9UGP4 676 aa13.42□□□□□ -0.26
CASC4-201ENST00000299957 NT5C1B-RDH14C9J2C7 533 aa13.42□□□□□ -0.26
CASC4-201ENST00000299957 NFKBIEO00221 500 aa13.42□□□□□ -0.26
CASC4-201ENST00000299957 STRNO43815 780 aa13.42□□□□□ -0.26
CASC4-201ENST00000299957 NRP2O60462 931 aa13.42□□□□□ -0.26
CASC4-201ENST00000299957 GCATO75600 419 aa13.42□□□□□ -0.26
CASC4-201ENST00000299957 SOAT2O75908 522 aa13.42□□□□□ -0.26
CASC4-201ENST00000299957 C22orf31O95567 290 aa13.42□□□□□ -0.26
CASC4-201ENST00000299957 HUNKP57058 714 aa13.42□□□□□ -0.26
CASC4-201ENST00000299957 PCLAFQ15004 111 aa13.42□□□□□ -0.26
CASC4-201ENST00000299957 EZH1Q92800 747 aaPredicted RBP13.42□□□□□ -0.26
CASC4-201ENST00000299957 TBATAQ96M53 351 aa13.42□□□□□ -0.26
CASC4-201ENST00000299957 PPM1MQ96MI6 270 aa13.42□□□□□ -0.26
CASC4-201ENST00000299957 TLL2Q9Y6L7 1015 aa13.42□□□□□ -0.26
CASC4-201ENST00000299957 ALS2Q96Q42 1657 aa13.42□□□□□ -0.26
CASC4-201ENST00000299957 TRPM3Q9HCF6 1732 aaPredicted RBP13.42□□□□□ -0.26
CASC4-201ENST00000299957 H3BMM5 538 aa13.42□□□□□ -0.26
CASC4-201ENST00000299957 KDM1AO60341 852 aa13.42□□□□□ -0.26
CASC4-201ENST00000299957 BEST1O76090 585 aa13.42□□□□□ -0.26
CASC4-201ENST00000299957 CELF2O95319 508 aaKnown RBP13.42□□□□□ -0.26
CASC4-201ENST00000299957 HSPA1AP0DMV8 641 aaKnown RBP13.42□□□□□ -0.26
CASC4-201ENST00000299957 HSPA1BP0DMV9 641 aaKnown RBP13.42□□□□□ -0.26
CASC4-201ENST00000299957 ATP5F1P24539 256 aaPredicted RBP13.42□□□□□ -0.26
CASC4-201ENST00000299957 CLCNKBP51801 687 aa13.42□□□□□ -0.26
CASC4-201ENST00000299957 IL23RQ5VWK5 629 aa13.42□□□□□ -0.26
CASC4-201ENST00000299957 GALNT15Q8N3T1 639 aa13.42□□□□□ -0.26
CASC4-201ENST00000299957 CLHC1Q8NHS4 586 aa13.42□□□□□ -0.26
CASC4-201ENST00000299957 VPS33AQ96AX1 596 aa13.42□□□□□ -0.26
CASC4-201ENST00000299957 PTCD3Q96EY7 689 aaKnown RBP13.42□□□□□ -0.26
CASC4-201ENST00000299957 PCED1BQ96HM7 432 aa13.42□□□□□ -0.26
CASC4-201ENST00000299957 PPP1R10Q96QC0 940 aaKnown RBP13.42□□□□□ -0.26
CASC4-201ENST00000299957 CXCL16Q9H2A7 254 aa13.42□□□□□ -0.26
CASC4-201ENST00000299957 DMAP1Q9NPF5 467 aaPredicted RBP13.42□□□□□ -0.26
CASC4-201ENST00000299957 VPS45Q9NRW7 570 aa13.42□□□□□ -0.26
CASC4-201ENST00000299957 CCNT2O60583 730 aaKnown RBP13.41□□□□□ -0.26
CASC4-201ENST00000299957 RAMP2O60895 175 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 TPSB2P20231 275 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 ADSLP30566 484 aaPredicted RBP13.41□□□□□ -0.26
CASC4-201ENST00000299957 SEMG2Q02383 582 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 UBE3AQ05086 875 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 TPSAB1Q15661 275 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 GSTA3Q16772 222 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 PLEKHH3Q7Z736 793 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 UNC93AQ86WB7 457 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 CBR4Q8N4T8 237 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 RP9Q8TA86 221 aaKnown RBP13.41□□□□□ -0.26
CASC4-201ENST00000299957 TM6SF2Q9BZW4 377 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 RHOJQ9H4E5 214 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms