RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 OR2T34Q8NGX1 318 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 PIGKQ92643 395 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 FATE1Q969F0 183 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 CELF6Q96J87 481 aaKnown RBP9.31□□□□□ -0.92
HMGN1-201ENST00000288344 LRIG1Q96JA1 1093 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 TSGA13Q96PP4 275 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 HEPHQ9BQS7 1158 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 ZWILCHQ9H900 591 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 DONSONQ9NYP3 566 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 HECAQ9UBI9 543 aaPredicted RBP9.31□□□□□ -0.92
HMGN1-201ENST00000288344 ALG6Q9Y672 507 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 NCOR2Q9Y618 2525 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 PLXNA2O75051 1894 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 A0A1W2PPC4 97 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 TSPAN11A1L157 253 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 PRR5-ARHGAP8B1AHC4 643 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 H3BRJ5 948 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 TRAFD1O14545 582 aaPredicted RBP9.3□□□□□ -0.92
HMGN1-201ENST00000288344 SLC30A4O14863 429 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 INSIG1O15503 277 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 RNASEH1O60930 286 aaKnown RBP9.3□□□□□ -0.92
HMGN1-201ENST00000288344 IL1BP01584 269 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 WNT1P04628 370 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 ACADMP11310 421 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 TIMP2P16035 220 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 COMTP21964 271 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 CD27P26842 260 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 DPP6P42658 865 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 SLC1A1P43005 524 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 PSMD8P48556 350 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 PEX5P50542 639 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 GEMIN4P57678 1058 aaKnown RBP9.3□□□□□ -0.92
HMGN1-201ENST00000288344 ARHGAP8P85298 464 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 LMNB2Q03252 620 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 IL10RBQ08334 325 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 SLC10A7Q0GE19 358 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 GALNT2Q10471 571 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 FGL2Q14314 439 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 MESDQ14696 234 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 DUOXA1Q1HG43 343 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 ANKRD20A8PQ5CZ79 823 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 FAM46CQ5VWP2 391 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 SLC9A4Q6AI14 798 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 NEK5Q6P3R8 708 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.3□□□□□ -0.92
HMGN1-201ENST00000288344 ARMCX6Q7L4S7 300 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 CYP2U1Q7Z449 544 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 FAM124AQ86V42 546 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 ZSWIM9Q86XI8 627 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 CACUL1Q86Y37 369 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 LRRC57Q8N9N7 239 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 TSEN2Q8NCE0 465 aaKnown RBP9.3□□□□□ -0.92
HMGN1-201ENST00000288344 HCAR2Q8TDS4 363 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 MAML1Q92585 1016 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 HSPH1Q92598 858 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 ECHDC3Q96DC8 303 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 ZNF599Q96NL3 588 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 RNF157Q96PX1 679 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 PSKH2Q96QS6 385 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 ZNF670Q9BS34 389 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 DEF6Q9H4E7 631 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 DKK3Q9UBP4 350 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 IL36AQ9UHA7 158 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 EIF2B4Q9UI10 523 aaKnown RBP9.3□□□□□ -0.92
HMGN1-201ENST00000288344 IPO11Q9UI26 975 aaKnown RBP9.3□□□□□ -0.92
HMGN1-201ENST00000288344 SLC6A14Q9UN76 642 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 ZFR2Q9UPR6 939 aaKnown RBP9.3□□□□□ -0.92
HMGN1-201ENST00000288344 FADS3Q9Y5Q0 445 aa9.3□□□□□ -0.92
HMGN1-201ENST00000288344 LRRK1Q38SD2 2015 aa9.29□□□□□ -0.92
HMGN1-201ENST00000288344 ARHGAP42A6NI28 874 aa9.29□□□□□ -0.92
HMGN1-201ENST00000288344 UPK3BL1B0FP48 263 aa9.29□□□□□ -0.92
HMGN1-201ENST00000288344 UPK3BL2E5RIL1 263 aa9.29□□□□□ -0.92
HMGN1-201ENST00000288344 KHNYNO15037 678 aaKnown RBP9.29□□□□□ -0.92
HMGN1-201ENST00000288344 BUB1O43683 1085 aa9.29□□□□□ -0.92
HMGN1-201ENST00000288344 AP1G1O43747 822 aa9.29□□□□□ -0.92
HMGN1-201ENST00000288344 NDUFS2O75306 463 aa9.29□□□□□ -0.92
HMGN1-201ENST00000288344 RNASEH2AO75792 299 aaKnown RBP9.29□□□□□ -0.92
HMGN1-201ENST00000288344 PRNPP04156 253 aa9.29□□□□□ -0.92
HMGN1-201ENST00000288344 ITGB7P26010 798 aa9.29□□□□□ -0.92
HMGN1-201ENST00000288344 CDH6P55285 790 aa9.29□□□□□ -0.92
HMGN1-201ENST00000288344 PPP2CBP62714 309 aa9.29□□□□□ -0.92
HMGN1-201ENST00000288344 PPP2CAP67775 309 aa9.29□□□□□ -0.92
HMGN1-201ENST00000288344 ADCY2Q08462 1091 aa9.29□□□□□ -0.92
HMGN1-201ENST00000288344 RFTN1Q14699 578 aaPredicted RBP9.29□□□□□ -0.92
HMGN1-201ENST00000288344 HADHQ16836 314 aaKnown RBP9.29□□□□□ -0.92
HMGN1-201ENST00000288344 RSPO4Q2I0M5 234 aaPredicted RBP9.29□□□□□ -0.92
HMGN1-201ENST00000288344 ZNF284Q2VY69 593 aa9.29□□□□□ -0.92
HMGN1-201ENST00000288344 TTC31Q49AM3 519 aaPredicted RBP9.29□□□□□ -0.92
HMGN1-201ENST00000288344 ZNF805Q5CZA5 627 aa9.29□□□□□ -0.92
HMGN1-201ENST00000288344 TRIM61Q5EBN2 209 aa9.29□□□□□ -0.92
HMGN1-201ENST00000288344 ATXN7L2Q5T6C5 722 aaPredicted RBP9.29□□□□□ -0.92
HMGN1-201ENST00000288344 STPG1Q5TH74 334 aa9.29□□□□□ -0.92
HMGN1-201ENST00000288344 ALG1LQ6GMV1 187 aa9.29□□□□□ -0.92
HMGN1-201ENST00000288344 ERN2Q76MJ5 926 aaKnown RBP9.29□□□□□ -0.92
HMGN1-201ENST00000288344 DSG4Q86SJ6 1040 aa9.29□□□□□ -0.92
HMGN1-201ENST00000288344 PIP4P1Q86T03 277 aa9.29□□□□□ -0.92
HMGN1-201ENST00000288344 TRIM69Q86WT6 500 aa9.29□□□□□ -0.92
HMGN1-201ENST00000288344 LRRC49Q8IUZ0 686 aa9.29□□□□□ -0.92
HMGN1-201ENST00000288344 PLD5Q8N7P1 536 aa9.29□□□□□ -0.92
HMGN1-201ENST00000288344 TMEM145Q8NBT3 493 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms