RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 HTR2BP41595 481 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 TUBP50607 506 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 PKN1Q16512 942 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 TMEM119Q4V9L6 283 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 BHLHB9Q6PI77 547 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 C8orf59Q8N0T1 100 aaPredicted RBP5.76□□□□□ -1.49
VCAN-201ENST00000265077 DOCK7Q96N67 2140 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 SFMBT1Q9UHJ3 866 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 SNX7Q9UNH6 387 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 FAM208AQ9UK61 1670 aaKnown RBP5.76□□□□□ -1.49
VCAN-201ENST00000265077 ERI2A8K979 691 aaKnown RBP5.76□□□□□ -1.49
VCAN-201ENST00000265077 H3BSA7 217 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 NPPAP01160 153 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 MYL12AP19105 171 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 CENPAP49450 140 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 GCNT1Q02742 428 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 TGM3Q08188 693 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 SGO1Q5FBB7 561 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 ERAP2Q6P179 960 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 RFWD3Q6PCD5 774 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 NT5DC4Q86YG4 428 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 ALDH16A1Q8IZ83 802 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 C12orf50Q8NA57 414 aaPredicted RBP5.76□□□□□ -1.49
VCAN-201ENST00000265077 FAM45AQ8TCE6 357 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 RXFP2Q8WXD0 754 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 TMEM9Q9P0T7 183 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 SHANK1Q9Y566 2161 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 MUSKO15146 869 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 ITM2AO43736 263 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 HMGCRP04035 888 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 CYP2F1P24903 491 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 ELK3P41970 407 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 CASP4P49662 377 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 SLC26A2P50443 739 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 IL5RAQ01344 420 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 CORO6Q6QEF8 472 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 SLC22A16Q86VW1 577 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 NXNL1Q96CM4 212 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 HAPLN3Q96S86 360 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 PRKAG2Q9UGJ0 569 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 NOL4O94818 638 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 PRKCIP41743 596 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 HARS2P49590 506 aaKnown RBP5.75□□□□□ -1.49
VCAN-201ENST00000265077 RPL14P50914 215 aaKnown RBP5.75□□□□□ -1.49
VCAN-201ENST00000265077 PPP2R2BQ00005 443 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 TMEM62Q0P6H9 643 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 NR6A1Q15406 480 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 PAGE2Q7Z2X7 111 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 INPP4AQ96PE3 977 aaPredicted RBP5.75□□□□□ -1.49
VCAN-201ENST00000265077 MTMR12Q9C0I1 747 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 MKRN2Q9H000 416 aaKnown RBP5.75□□□□□ -1.49
VCAN-201ENST00000265077 TTYH1Q9H313 450 aaPredicted RBP5.75□□□□□ -1.49
VCAN-201ENST00000265077 SERHLQ9NQF3 203 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 DDIT4Q9NX09 232 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 GNEQ9Y223 722 aaKnown RBP5.75□□□□□ -1.49
VCAN-201ENST00000265077 LOC100506127A0A0U1RQW1 187 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 ANKRD34BA5PLL1 514 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 SERPINA6P08185 405 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 MAGEA2P43356 314 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 ACTR3P61158 418 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 GNA13Q14344 377 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 IL31Q6EBC2 164 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 AP3S1Q92572 193 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 SLC4A5Q9BY07 1137 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 NDUFAF1Q9Y375 327 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 E2F8A0AVK6 867 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 CCNT2O60583 730 aaKnown RBP5.75□□□□□ -1.49
VCAN-201ENST00000265077 PSIP1O75475 530 aaKnown RBP5.75□□□□□ -1.49
VCAN-201ENST00000265077 GLP2RO95838 553 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 ERCC6L2Q5T890 1561 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 SV2AQ7L0J3 742 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 GRAMD2AQ8IUY3 354 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 UBR1Q8IWV7 1749 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 ANKRD53Q8N9V6 530 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 GSTCDQ8NEC7 633 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 PIWIL2Q8TC59 973 aaKnown RBP5.75□□□□□ -1.49
VCAN-201ENST00000265077 ZNF512Q96ME7 567 aaPredicted RBP5.75□□□□□ -1.49
VCAN-201ENST00000265077 MUC3BQ9H195 1237 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 NINJ2Q9NZG7 142 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 TRHDEQ9UKU6 1024 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 AP4E1Q9UPM8 1137 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 TAF6LQ9Y6J9 622 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 SYNCRIPO60506 623 aaKnown RBP5.75□□□□□ -1.49
VCAN-201ENST00000265077 ZNF682O95780 498 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 DGCR6Q14129 220 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 KIF18BQ86Y91 864 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 KIFC1Q9BW19 673 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 TSR3Q9UJK0 312 aaKnown RBP5.75□□□□□ -1.49
VCAN-201ENST00000265077 ASTN2O75129 1339 aaPredicted RBP5.75□□□□□ -1.49
VCAN-201ENST00000265077 MROH1Q8NDA8 1641 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 A0A096LPK6 155 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 ATG7O95352 703 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 NELFEP18615 380 aaKnown RBP5.75□□□□□ -1.49
VCAN-201ENST00000265077 PTPN11Q06124 597 aaPredicted RBP5.75□□□□□ -1.49
VCAN-201ENST00000265077 RFX4Q33E94 735 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 FUT11Q495W5 492 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 FAXCQ5TGI0 409 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 CAND1Q86VP6 1230 aaKnown RBP5.75□□□□□ -1.49
VCAN-201ENST00000265077 PDSS2Q86YH6 399 aa5.75□□□□□ -1.49
VCAN-201ENST00000265077 IFNLR1Q8IU57 520 aaPredicted RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms