RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 GLRBP48167 497 aa13.74□□□□□ -0.21
VMP1-201ENST00000262291 BNIP1Q12981 228 aa13.74□□□□□ -0.21
VMP1-201ENST00000262291 GRTP1Q5TC63 336 aa13.74□□□□□ -0.21
VMP1-201ENST00000262291 ATG14Q6ZNE5 492 aa13.74□□□□□ -0.21
VMP1-201ENST00000262291 TIFABQ6ZNK6 161 aa13.74□□□□□ -0.21
VMP1-201ENST00000262291 TTC7BQ86TV6 843 aa13.74□□□□□ -0.21
VMP1-201ENST00000262291 VPS39Q96JC1 886 aa13.74□□□□□ -0.21
VMP1-201ENST00000262291 SMIM14Q96QK8 99 aa13.74□□□□□ -0.21
VMP1-201ENST00000262291 SLC22A12Q96S37 553 aa13.74□□□□□ -0.21
VMP1-201ENST00000262291 KIFC1Q9BW19 673 aa13.74□□□□□ -0.21
VMP1-201ENST00000262291 TRIM55Q9BYV6 548 aa13.74□□□□□ -0.21
VMP1-201ENST00000262291 TRIM4Q9C037 500 aa13.74□□□□□ -0.21
VMP1-201ENST00000262291 KCNK13Q9HB14 408 aa13.74□□□□□ -0.21
VMP1-201ENST00000262291 DLGAP2Q9P1A6 1054 aa13.74□□□□□ -0.21
VMP1-201ENST00000262291 UXTQ9UBK9 157 aaPredicted RBP13.74□□□□□ -0.21
VMP1-201ENST00000262291 HEY2Q9UBP5 337 aa13.74□□□□□ -0.21
VMP1-201ENST00000262291 IGLV3-10A0A075B6K4 115 aa13.73□□□□□ -0.21
VMP1-201ENST00000262291 A0A096LPK6 155 aa13.73□□□□□ -0.21
VMP1-201ENST00000262291 OR51F1A6NGY5 319 aa13.73□□□□□ -0.21
VMP1-201ENST00000262291 WASH4PA8MWX3 477 aa13.73□□□□□ -0.21
VMP1-201ENST00000262291 MYL2P10916 166 aa13.73□□□□□ -0.21
VMP1-201ENST00000262291 CORO1AP31146 461 aaKnown RBP13.73□□□□□ -0.21
VMP1-201ENST00000262291 SPRP35270 261 aaPredicted RBP13.73□□□□□ -0.21
VMP1-201ENST00000262291 RENBPP51606 427 aa13.73□□□□□ -0.21
VMP1-201ENST00000262291 NDST2P52849 883 aa13.73□□□□□ -0.21
VMP1-201ENST00000262291 LIMK2P53671 638 aa13.73□□□□□ -0.21
VMP1-201ENST00000262291 NRG1Q02297 640 aaPredicted RBP13.73□□□□□ -0.21
VMP1-201ENST00000262291 TWF1Q12792 350 aa13.73□□□□□ -0.21
VMP1-201ENST00000262291 ANO4Q32M45 955 aa13.73□□□□□ -0.21
VMP1-201ENST00000262291 PCID2Q5JVF3 399 aa13.73□□□□□ -0.21
VMP1-201ENST00000262291 IL31Q6EBC2 164 aa13.73□□□□□ -0.21
VMP1-201ENST00000262291 KDELC1Q6UW63 502 aa13.73□□□□□ -0.21
VMP1-201ENST00000262291 RAPH1Q70E73 1250 aa13.73□□□□□ -0.21
VMP1-201ENST00000262291 PHC3Q8NDX5 983 aa13.73□□□□□ -0.21
VMP1-201ENST00000262291 PPHLN1Q8NEY8 458 aaKnown RBP13.73□□□□□ -0.21
VMP1-201ENST00000262291 SEMA3CQ99985 751 aa13.73□□□□□ -0.21
VMP1-201ENST00000262291 YIPF1Q9Y548 306 aa13.73□□□□□ -0.21
VMP1-201ENST00000262291 PLIN3O60664 434 aa13.73□□□□□ -0.21
VMP1-201ENST00000262291 SLC4A1P02730 911 aa13.73□□□□□ -0.21
VMP1-201ENST00000262291 AHSGP02765 367 aa13.73□□□□□ -0.21
VMP1-201ENST00000262291 SERPINB3P29508 390 aa13.73□□□□□ -0.21
VMP1-201ENST00000262291 HTR7P34969 479 aa13.73□□□□□ -0.21
VMP1-201ENST00000262291 GALNT3Q14435 633 aa13.73□□□□□ -0.21
VMP1-201ENST00000262291 SETDB1Q15047 1291 aa13.73□□□□□ -0.21
VMP1-201ENST00000262291 ZNF789Q5FWF6 425 aa13.73□□□□□ -0.21
VMP1-201ENST00000262291 HECTD3Q5T447 861 aa13.73□□□□□ -0.21
VMP1-201ENST00000262291 CNKSR3Q6P9H4 555 aa13.73□□□□□ -0.21
VMP1-201ENST00000262291 RANBP10Q6VN20 620 aa13.73□□□□□ -0.21
VMP1-201ENST00000262291 ARHGAP22Q7Z5H3 698 aa13.73□□□□□ -0.21
VMP1-201ENST00000262291 ALYREFQ86V81 257 aaKnown RBP13.73□□□□□ -0.21
VMP1-201ENST00000262291 MFSD6LQ8IWD5 586 aa13.73□□□□□ -0.21
VMP1-201ENST00000262291 PRICKLE1Q96MT3 831 aaPredicted RBP13.73□□□□□ -0.21
VMP1-201ENST00000262291 SLC25A51Q9H1U9 297 aa13.73□□□□□ -0.21
VMP1-201ENST00000262291 PPARGC1AQ9UBK2 798 aaKnown RBP13.73□□□□□ -0.21
VMP1-201ENST00000262291 TCAF1Q9Y4C2 921 aa13.73□□□□□ -0.21
VMP1-201ENST00000262291 TANC1Q9C0D5 1861 aa13.73□□□□□ -0.21
VMP1-201ENST00000262291 TRIM43BA6NCK2 446 aa13.72□□□□□ -0.21
VMP1-201ENST00000262291 ACSL4O60488 711 aa13.72□□□□□ -0.21
VMP1-201ENST00000262291 C2P06681 752 aa13.72□□□□□ -0.21
VMP1-201ENST00000262291 CNTFP26441 200 aa13.72□□□□□ -0.21
VMP1-201ENST00000262291 TUFMP49411 452 aaKnown RBP13.72□□□□□ -0.21
VMP1-201ENST00000262291 SCNN1BP51168 640 aa13.72□□□□□ -0.21
VMP1-201ENST00000262291 ARFIP2P53365 341 aa13.72□□□□□ -0.21
VMP1-201ENST00000262291 ZNF33AQ06730 810 aa13.72□□□□□ -0.21
VMP1-201ENST00000262291 SERINC3Q13530 473 aa13.72□□□□□ -0.21
VMP1-201ENST00000262291 HNRNPDQ14103 355 aaKnown RBP13.72□□□□□ -0.21
VMP1-201ENST00000262291 KLHL23Q8NBE8 558 aa13.72□□□□□ -0.21
VMP1-201ENST00000262291 ZNF461Q8TAF7 563 aa13.72□□□□□ -0.21
VMP1-201ENST00000262291 AGR3Q8TD06 166 aa13.72□□□□□ -0.21
VMP1-201ENST00000262291 TOP1MTQ969P6 601 aa13.72□□□□□ -0.21
VMP1-201ENST00000262291 TRIM43Q96BQ3 446 aaPredicted RBP13.72□□□□□ -0.21
VMP1-201ENST00000262291 IMP4Q96G21 291 aaKnown RBP13.72□□□□□ -0.21
VMP1-201ENST00000262291 ZNF558Q96NG5 402 aa13.72□□□□□ -0.21
VMP1-201ENST00000262291 OXCT2Q9BYC2 517 aaPredicted RBP13.72□□□□□ -0.21
VMP1-201ENST00000262291 SIRPGQ9P1W8 387 aa13.72□□□□□ -0.21
VMP1-201ENST00000262291 ARMCX1Q9P291 453 aa13.72□□□□□ -0.21
VMP1-201ENST00000262291 DRGXA6NNA5 263 aa13.72□□□□□ -0.21
VMP1-201ENST00000262291 CLTBP09497 229 aa13.72□□□□□ -0.21
VMP1-201ENST00000262291 SLC1A2P43004 574 aa13.72□□□□□ -0.21
VMP1-201ENST00000262291 ALDH1A3P47895 512 aa13.72□□□□□ -0.21
VMP1-201ENST00000262291 HARS2P49590 506 aaKnown RBP13.72□□□□□ -0.21
VMP1-201ENST00000262291 ZBTB16Q05516 673 aa13.72□□□□□ -0.21
VMP1-201ENST00000262291 STX3Q13277 289 aa13.72□□□□□ -0.21
VMP1-201ENST00000262291 LBRQ14739 615 aaKnown RBP13.72□□□□□ -0.21
VMP1-201ENST00000262291 PCLAFQ15004 111 aa13.72□□□□□ -0.21
VMP1-201ENST00000262291 ZNF470Q6ECI4 717 aa13.72□□□□□ -0.21
VMP1-201ENST00000262291 UCMAQ8WVF2 138 aa13.72□□□□□ -0.21
VMP1-201ENST00000262291 NDNQ99608 321 aa13.72□□□□□ -0.21
VMP1-201ENST00000262291 SUDS3Q9H7L9 328 aaPredicted RBP13.72□□□□□ -0.21
VMP1-201ENST00000262291 AFF4Q9UHB7 1163 aaKnown RBP13.72□□□□□ -0.21
VMP1-201ENST00000262291 ZFP69BQ9UJL9 534 aa13.72□□□□□ -0.21
VMP1-201ENST00000262291 CDH23Q9H251 3354 aa13.72□□□□□ -0.21
VMP1-201ENST00000262291 A0A0U1RQS6 177 aa13.71□□□□□ -0.21
VMP1-201ENST00000262291 MAGEB16A2A368 324 aa13.71□□□□□ -0.21
VMP1-201ENST00000262291 PSMD3O43242 534 aa13.71□□□□□ -0.21
VMP1-201ENST00000262291 GLRA3O75311 464 aa13.71□□□□□ -0.21
VMP1-201ENST00000262291 STC2O76061 302 aa13.71□□□□□ -0.21
VMP1-201ENST00000262291 PROCP04070 461 aa13.71□□□□□ -0.21
VMP1-201ENST00000262291 SOD2P04179 222 aa13.71□□□□□ -0.21
VMP1-201ENST00000262291 DLDP09622 509 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms