RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 GALTP07902 379 aa13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 MRPL10Q7Z7H8 261 aaKnown RBP13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 ARL14EPQ8N8R7 260 aaPredicted RBP13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 DQX1Q8TE96 717 aaKnown RBP13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 GULP1Q9UBP9 304 aa13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 C15orf38-AP3S2A0A0A6YYH1 394 aa13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 A0A0G2JND7 137 aa13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 DAOAP59103 153 aa13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 ECT2LQ008S8 904 aa13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 SLC7A5Q01650 507 aa13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 ARPINQ7Z6K5 226 aa13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 ZSCAN18Q8TBC5 510 aaPredicted RBP13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 MS4A14Q96JA4 679 aa13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 MS4A4AQ96JQ5 239 aa13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 TCF12Q99081 682 aa13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 AIF1LQ9BQI0 150 aa13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 CCM2Q9BSQ5 444 aa13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 SNRNP25Q9BV90 132 aaKnown RBP13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 C1orf127Q8N9H9 656 aa13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 CHP1Q99653 195 aa13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 DUSP9Q99956 384 aaKnown RBP13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 KCNE2Q9Y6J6 123 aa13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 CLDN4O14493 209 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 SPATA31D3P0C874 917 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 CD44P16070 742 aaKnown RBP13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 CD86P42081 329 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 ZNF33AQ06730 810 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 TBC1D25Q3MII6 688 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 GALNT18Q6P9A2 607 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 PRSS55Q6UWB4 352 aaPredicted RBP13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 SPATA31D4Q6ZUB0 917 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 GPSM1Q86YR5 675 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 MED8Q96G25 268 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 PCED1BQ96HM7 432 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 ZCWPW1Q9H0M4 648 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 SLC28A1O00337 649 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 NDUFB5O43674 189 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 IPO13O94829 963 aaKnown RBP13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 GPR15P49685 360 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 CAPN13Q6MZZ7 669 aaPredicted RBP13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 BBS12Q6ZW61 710 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 STYXQ8WUJ0 223 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 FAM83DQ9H4H8 585 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 L1RE1Q9UN81 338 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 SERPINB1P30740 379 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 RPL22P35268 128 aaKnown RBP13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 RAB33AQ14088 237 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 GSTA3Q16772 222 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 KCNT1Q5JUK3 1230 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 C6orf10Q5SRN2 563 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 CHSY3Q70JA7 882 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 KCNK18Q7Z418 384 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 C11orf96Q7Z7L8 435 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 SLC9B2Q86UD5 537 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 KLHL23Q8NBE8 558 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 OR5B17Q8NGF7 314 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 SPATA20Q8TB22 786 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 ARL15Q9NXU5 204 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 DNAJC25-GNG10A0A024R161 153 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 GLYATL1P3A0A0U1RQE8 302 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 CCND1P24385 295 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 KCNMA1Q12791 1236 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 CSHL1Q14406 222 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 ZKSCAN8Q15776 578 aaPredicted RBP13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 NEPROQ6NW34 567 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 DCP2Q8IU60 420 aaKnown RBP13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 C4orf32Q8N8J7 132 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 FBXO36Q8NEA4 188 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 HCAR2Q8TDS4 363 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 LENG1Q96BZ8 264 aaPredicted RBP13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 REXO5Q96IC2 774 aaKnown RBP13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 TMEM216Q9P0N5 145 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 GGA2Q9UJY4 613 aa13.54□□□□□ -0.24
PRPF38A-201ENST00000257181 ENTPD5O75356 428 aa13.53□□□□□ -0.24
PRPF38A-201ENST00000257181 SUPT7LO94864 414 aa13.53□□□□□ -0.24
PRPF38A-201ENST00000257181 ITGAVP06756 1048 aa13.53□□□□□ -0.24
PRPF38A-201ENST00000257181 LRRC74AQ0VAA2 488 aa13.53□□□□□ -0.24
PRPF38A-201ENST00000257181 ELOCQ15369 112 aa13.53□□□□□ -0.24
PRPF38A-201ENST00000257181 DAB2IPQ5VWQ8 1189 aa13.53□□□□□ -0.24
PRPF38A-201ENST00000257181 RIN3Q8TB24 985 aa13.53□□□□□ -0.24
PRPF38A-201ENST00000257181 ING5Q8WYH8 240 aa13.53□□□□□ -0.24
PRPF38A-201ENST00000257181 KLQ9UEF7 1012 aa13.53□□□□□ -0.24
PRPF38A-201ENST00000257181 ADGRE2Q9UHX3 823 aa13.53□□□□□ -0.24
PRPF38A-201ENST00000257181 TMCC3Q9ULS5 477 aa13.53□□□□□ -0.24
PRPF38A-201ENST00000257181 TRAFD1O14545 582 aaPredicted RBP13.53□□□□□ -0.24
PRPF38A-201ENST00000257181 RASGRP1O95267 797 aa13.53□□□□□ -0.24
PRPF38A-201ENST00000257181 HOXB2P14652 356 aa13.53□□□□□ -0.24
PRPF38A-201ENST00000257181 TDHQ8IZJ6 230 aa13.53□□□□□ -0.24
PRPF38A-201ENST00000257181 ATXN7L3BQ96GX2 97 aa13.53□□□□□ -0.24
PRPF38A-201ENST00000257181 SNX5Q9Y5X3 404 aa13.53□□□□□ -0.24
PRPF38A-201ENST00000257181 TMEM265A0A087WTH1 108 aa13.53□□□□□ -0.24
PRPF38A-201ENST00000257181 ZNF24P17028 368 aa13.53□□□□□ -0.24
PRPF38A-201ENST00000257181 SLC10A6Q3KNW5 377 aa13.53□□□□□ -0.24
PRPF38A-201ENST00000257181 ATP6AP1LQ52LC2 224 aa13.53□□□□□ -0.24
PRPF38A-201ENST00000257181 EARS2Q5JPH6 523 aaKnown RBP13.53□□□□□ -0.24
PRPF38A-201ENST00000257181 KRT80Q6KB66 452 aa13.53□□□□□ -0.24
PRPF38A-201ENST00000257181 TRIM69Q86WT6 500 aa13.53□□□□□ -0.24
PRPF38A-201ENST00000257181 OR10G6Q8NH81 332 aa13.53□□□□□ -0.24
PRPF38A-201ENST00000257181 CLP1Q92989 425 aaKnown RBP13.53□□□□□ -0.24
PRPF38A-201ENST00000257181 FAM162AQ96A26 154 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms