RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 TAGLN3Q9UI15 199 aa9.3□□□□□ -0.92
RPA1-201ENST00000254719 IKZF3Q9UKT9 509 aa9.3□□□□□ -0.92
RPA1-201ENST00000254719 ARHGAP26Q9UNA1 814 aa9.3□□□□□ -0.92
RPA1-201ENST00000254719 VPS9D1Q9Y2B5 631 aa9.3□□□□□ -0.92
RPA1-201ENST00000254719 ST14Q9Y5Y6 855 aa9.3□□□□□ -0.92
RPA1-201ENST00000254719 RAD54BQ9Y620 910 aa9.3□□□□□ -0.92
RPA1-201ENST00000254719 ASPMQ8IZT6 3477 aa9.3□□□□□ -0.92
RPA1-201ENST00000254719 ATP9BO43861 1147 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 THRAP10827 490 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 PIM1P11309 404 aaPredicted RBP9.29□□□□□ -0.92
RPA1-201ENST00000254719 ODC1P11926 461 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 HDCP19113 662 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 CYP2C18P33260 490 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 ZFP36L2P47974 494 aaKnown RBP9.29□□□□□ -0.92
RPA1-201ENST00000254719 NPY2RP49146 381 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 EPHB1P54762 984 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 MAP2K5Q13163 448 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 EML3Q32P44 896 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 PAOXQ6QHF9 649 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 FAM35AQ86V20 835 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 NTAN1Q96AB6 310 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 NMD3Q96D46 503 aaKnown RBP9.29□□□□□ -0.92
RPA1-201ENST00000254719 COLEC11Q9BWP8 271 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 THAP1Q9NVV9 213 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 NMRK1Q9NWW6 199 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 KCNK4Q9NYG8 393 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 PDP2Q9P2J9 529 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 ADAMTS6Q9UKP5 1117 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 NEUROG3Q9Y4Z2 214 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 HEMK1Q9Y5R4 338 aaPredicted RBP9.29□□□□□ -0.92
RPA1-201ENST00000254719 MUSKO15146 869 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 DDHD2O94830 711 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 AP2A1O95782 977 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 AHSGP02765 367 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 CYP11A1P05108 521 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 HOXB8P17481 243 aaPredicted RBP9.29□□□□□ -0.92
RPA1-201ENST00000254719 NOS2P35228 1153 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 GP5P40197 560 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 GPR15P49685 360 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 MED21Q13503 144 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 CUL3Q13618 768 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 FASTKD1Q53R41 847 aaKnown RBP9.29□□□□□ -0.92
RPA1-201ENST00000254719 SPANXN3Q5MJ09 141 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 GRTP1Q5TC63 336 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 CWF19L1Q69YN2 538 aaKnown RBP9.29□□□□□ -0.92
RPA1-201ENST00000254719 C8orf82Q6P1X6 216 aaPredicted RBP9.29□□□□□ -0.92
RPA1-201ENST00000254719 RPS27LQ71UM5 84 aaKnown RBP9.29□□□□□ -0.92
RPA1-201ENST00000254719 SCN4BQ8IWT1 228 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 PCYOX1LQ8NBM8 494 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 GAD1Q99259 594 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 ST3GAL5Q9UNP4 418 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 MAGEB3O15480 346 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 SIN3BO75182 1162 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 CA5AP35218 305 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 ATXN3P54252 364 aaPredicted RBP9.29□□□□□ -0.92
RPA1-201ENST00000254719 ALDH18A1P54886 795 aaKnown RBP9.29□□□□□ -0.92
RPA1-201ENST00000254719 RPL10AP62906 217 aaKnown RBP9.29□□□□□ -0.92
RPA1-201ENST00000254719 KDSRQ06136 332 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 CDK18Q07002 472 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 ZNF280BQ86YH2 543 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 PSTKQ8IV42 348 aaKnown RBP9.29□□□□□ -0.92
RPA1-201ENST00000254719 DCLK2Q8N568 766 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 SLC26A7Q8TE54 656 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 EDEM1Q92611 657 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 GFM2Q969S9 779 aaKnown RBP9.29□□□□□ -0.92
RPA1-201ENST00000254719 PBXIP1Q96AQ6 731 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 RBBP8Q99708 897 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 C20orf96Q9NUD7 363 aaPredicted RBP9.29□□□□□ -0.92
RPA1-201ENST00000254719 COPG2Q9UBF2 871 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 ORC6Q9Y5N6 252 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 TLL2Q9Y6L7 1015 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 RPS6KL1Q9Y6S9 549 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 M0QYT0 321 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 C6orf222P0C671 652 aaPredicted RBP9.29□□□□□ -0.92
RPA1-201ENST00000254719 HOXD10P28358 340 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 STX5Q13190 355 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 TICAM1Q8IUC6 712 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 OR13J1Q8NGT2 312 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 MRPL1Q9BYD6 325 aaKnown RBP9.29□□□□□ -0.92
RPA1-201ENST00000254719 TSPYL2Q9H2G4 693 aaPredicted RBP9.29□□□□□ -0.92
RPA1-201ENST00000254719 DDX43Q9NXZ2 648 aaKnown RBP9.29□□□□□ -0.92
RPA1-201ENST00000254719 CDYLQ9Y232 598 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 ACTL7AQ9Y615 435 aa9.29□□□□□ -0.92
RPA1-201ENST00000254719 C17orf102A2RUQ5 167 aa9.28□□□□□ -0.92
RPA1-201ENST00000254719 MEI4A8MW99 385 aa9.28□□□□□ -0.92
RPA1-201ENST00000254719 SERPINE1P05121 402 aa9.28□□□□□ -0.92
RPA1-201ENST00000254719 PGAM1P18669 254 aa9.28□□□□□ -0.92
RPA1-201ENST00000254719 CHRNA4P43681 627 aa9.28□□□□□ -0.92
RPA1-201ENST00000254719 BRCC3P46736 316 aa9.28□□□□□ -0.92
RPA1-201ENST00000254719 TKTL1P51854 596 aa9.28□□□□□ -0.92
RPA1-201ENST00000254719 AQP5P55064 265 aa9.28□□□□□ -0.92
RPA1-201ENST00000254719 IRF5Q13568 498 aa9.28□□□□□ -0.92
RPA1-201ENST00000254719 SPOUT1Q5T280 376 aaKnown RBP9.28□□□□□ -0.92
RPA1-201ENST00000254719 PIK3R6Q5UE93 754 aa9.28□□□□□ -0.92
RPA1-201ENST00000254719 KIAA1841Q6NSI8 718 aa9.28□□□□□ -0.92
RPA1-201ENST00000254719 TAF2Q6P1X5 1199 aa9.28□□□□□ -0.92
RPA1-201ENST00000254719 CASP10Q92851 521 aa9.28□□□□□ -0.92
RPA1-201ENST00000254719 SENP8Q96LD8 212 aa9.28□□□□□ -0.92
RPA1-201ENST00000254719 SNX15Q9NRS6 342 aa9.28□□□□□ -0.92
RPA1-201ENST00000254719 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms