RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 KDM4CQ9H3R0 1056 aa23.65■■□□□ 1.38
SYNGR3-201ENST00000248121 C20orf96Q9NUD7 363 aaPredicted RBP23.65■■□□□ 1.38
SYNGR3-201ENST00000248121 TTC24A2A3L6 582 aaPredicted RBP23.64■■□□□ 1.38
SYNGR3-201ENST00000248121 YBEYP58557 167 aaPredicted RBP23.64■■□□□ 1.38
SYNGR3-201ENST00000248121 DSC2Q02487 901 aa23.64■■□□□ 1.38
SYNGR3-201ENST00000248121 PDE1CQ14123 709 aaPredicted RBP23.64■■□□□ 1.38
SYNGR3-201ENST00000248121 GRTP1Q5TC63 336 aa23.64■■□□□ 1.38
SYNGR3-201ENST00000248121 STRA8Q7Z7C7 330 aa23.64■■□□□ 1.38
SYNGR3-201ENST00000248121 CCDC117Q8IWD4 279 aaPredicted RBP23.64■■□□□ 1.38
SYNGR3-201ENST00000248121 ATP2A3Q93084 1043 aa23.64■■□□□ 1.38
SYNGR3-201ENST00000248121 FSD1LQ9BXM9 530 aa23.64■■□□□ 1.38
SYNGR3-201ENST00000248121 GGT7Q9UJ14 662 aa23.64■■□□□ 1.38
SYNGR3-201ENST00000248121 A0A0D9SEW6 157 aa23.64■■□□□ 1.37
SYNGR3-201ENST00000248121 GOLGA8TH3BQL2 631 aa23.64■■□□□ 1.37
SYNGR3-201ENST00000248121 RHOP08100 348 aa23.64■■□□□ 1.37
SYNGR3-201ENST00000248121 PCSK7Q16549 785 aa23.64■■□□□ 1.37
SYNGR3-201ENST00000248121 LACTB2Q53H82 288 aaPredicted RBP23.64■■□□□ 1.37
SYNGR3-201ENST00000248121 ARMC2Q8NEN0 867 aa23.64■■□□□ 1.37
SYNGR3-201ENST00000248121 ARRDC2Q8TBH0 407 aa23.64■■□□□ 1.37
SYNGR3-201ENST00000248121 ACMSDQ8TDX5 336 aa23.64■■□□□ 1.37
SYNGR3-201ENST00000248121 SAMD11Q96NU1 681 aa23.64■■□□□ 1.37
SYNGR3-201ENST00000248121 MECRQ9BV79 373 aa23.64■■□□□ 1.37
SYNGR3-201ENST00000248121 ATP13A1Q9HD20 1204 aa23.64■■□□□ 1.37
SYNGR3-201ENST00000248121 CCL26Q9Y258 94 aa23.64■■□□□ 1.37
SYNGR3-201ENST00000248121 PRAMEF11O60813 436 aa23.63■■□□□ 1.37
SYNGR3-201ENST00000248121 BGNP21810 368 aa23.63■■□□□ 1.37
SYNGR3-201ENST00000248121 CDC25CP30307 473 aa23.63■■□□□ 1.37
SYNGR3-201ENST00000248121 CD86P42081 329 aa23.63■■□□□ 1.37
SYNGR3-201ENST00000248121 TEAD2Q15562 447 aa23.63■■□□□ 1.37
SYNGR3-201ENST00000248121 C12orf76Q8N812 135 aaPredicted RBP23.63■■□□□ 1.37
SYNGR3-201ENST00000248121 TADA1Q96BN2 335 aa23.63■■□□□ 1.37
SYNGR3-201ENST00000248121 PDFQ9HBH1 243 aa23.63■■□□□ 1.37
SYNGR3-201ENST00000248121 IARS2Q9NSE4 1012 aaKnown RBP23.63■■□□□ 1.37
SYNGR3-201ENST00000248121 TXNDC16Q9P2K2 825 aa23.63■■□□□ 1.37
SYNGR3-201ENST00000248121 ARNTP27540 789 aa23.63■■□□□ 1.37
SYNGR3-201ENST00000248121 LIG3P49916 1009 aa23.63■■□□□ 1.37
SYNGR3-201ENST00000248121 LIMK2P53671 638 aa23.63■■□□□ 1.37
SYNGR3-201ENST00000248121 ADGRF1Q5T601 910 aa23.63■■□□□ 1.37
SYNGR3-201ENST00000248121 Q6ZNB5 142 aa23.63■■□□□ 1.37
SYNGR3-201ENST00000248121 VN1R2Q8NFZ6 395 aa23.63■■□□□ 1.37
SYNGR3-201ENST00000248121 ISL2Q96A47 359 aa23.63■■□□□ 1.37
SYNGR3-201ENST00000248121 ARNT2Q9HBZ2 717 aa23.63■■□□□ 1.37
SYNGR3-201ENST00000248121 EMCNQ9ULC0 261 aa23.63■■□□□ 1.37
SYNGR3-201ENST00000248121 TCAF1Q9Y4C2 921 aa23.63■■□□□ 1.37
SYNGR3-201ENST00000248121 MYOFQ9NZM1 2061 aa23.62■■□□□ 1.37
SYNGR3-201ENST00000248121 MUSKO15146 869 aa23.62■■□□□ 1.37
SYNGR3-201ENST00000248121 GJB3O75712 270 aa23.62■■□□□ 1.37
SYNGR3-201ENST00000248121 HOXD9P28356 352 aaPredicted RBP23.62■■□□□ 1.37
SYNGR3-201ENST00000248121 GMPRP36959 345 aa23.62■■□□□ 1.37
SYNGR3-201ENST00000248121 ETFBP38117 255 aa23.62■■□□□ 1.37
SYNGR3-201ENST00000248121 MAGEA12P43365 314 aa23.62■■□□□ 1.37
SYNGR3-201ENST00000248121 ABCG1P45844 678 aa23.62■■□□□ 1.37
SYNGR3-201ENST00000248121 EPHA5P54756 1037 aa23.62■■□□□ 1.37
SYNGR3-201ENST00000248121 ITKQ08881 620 aa23.62■■□□□ 1.37
SYNGR3-201ENST00000248121 MSLNQ13421 630 aaPredicted RBP23.62■■□□□ 1.37
SYNGR3-201ENST00000248121 PPM1JQ5JR12 505 aa23.62■■□□□ 1.37
SYNGR3-201ENST00000248121 CES4AQ5XG92 561 aa23.62■■□□□ 1.37
SYNGR3-201ENST00000248121 FSTL4Q6MZW2 842 aa23.62■■□□□ 1.37
SYNGR3-201ENST00000248121 ESRP1Q6NXG1 681 aaKnown RBP23.62■■□□□ 1.37
SYNGR3-201ENST00000248121 GRASPQ7Z6J2 395 aaPredicted RBP23.62■■□□□ 1.37
SYNGR3-201ENST00000248121 DCLK2Q8N568 766 aa23.62■■□□□ 1.37
SYNGR3-201ENST00000248121 ZNF707Q96C28 371 aaPredicted RBP23.62■■□□□ 1.37
SYNGR3-201ENST00000248121 ATXN7L3BQ96GX2 97 aa23.62■■□□□ 1.37
SYNGR3-201ENST00000248121 SLC2A6Q9UGQ3 507 aa23.62■■□□□ 1.37
SYNGR3-201ENST00000248121 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.61■■□□□ 1.37
SYNGR3-201ENST00000248121 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.61■■□□□ 1.37
SYNGR3-201ENST00000248121 GSRP00390 522 aa23.61■■□□□ 1.37
SYNGR3-201ENST00000248121 ARCN1P48444 511 aaKnown RBP23.61■■□□□ 1.37
SYNGR3-201ENST00000248121 PDE1BQ01064 536 aa23.61■■□□□ 1.37
SYNGR3-201ENST00000248121 LBRQ14739 615 aaKnown RBP23.61■■□□□ 1.37
SYNGR3-201ENST00000248121 GPR158Q5T848 1215 aa23.61■■□□□ 1.37
SYNGR3-201ENST00000248121 RNF43Q68DV7 783 aa23.61■■□□□ 1.37
SYNGR3-201ENST00000248121 CMC1Q7Z7K0 106 aa23.61■■□□□ 1.37
SYNGR3-201ENST00000248121 CFAP97Q9P2B7 532 aa23.61■■□□□ 1.37
SYNGR3-201ENST00000248121 ACTL7AQ9Y615 435 aa23.61■■□□□ 1.37
SYNGR3-201ENST00000248121 NRIP1P48552 1158 aa23.61■■□□□ 1.37
SYNGR3-201ENST00000248121 SLC7A9P82251 487 aa23.61■■□□□ 1.37
SYNGR3-201ENST00000248121 ACVR1CQ8NER5 493 aa23.61■■□□□ 1.37
SYNGR3-201ENST00000248121 OR7D4Q8NG98 312 aa23.61■■□□□ 1.37
SYNGR3-201ENST00000248121 BHMTQ93088 406 aa23.61■■□□□ 1.37
SYNGR3-201ENST00000248121 VPS45Q9NRW7 570 aa23.61■■□□□ 1.37
SYNGR3-201ENST00000248121 TREX1Q9NSU2 369 aa23.61■■□□□ 1.37
SYNGR3-201ENST00000248121 MTO1Q9Y2Z2 717 aaKnown RBP23.61■■□□□ 1.37
SYNGR3-201ENST00000248121 XIRP2A4UGR9 3374 aa23.61■■□□□ 1.37
SYNGR3-201ENST00000248121 CCDC195A0A1B0GUA6 201 aa23.6■■□□□ 1.37
SYNGR3-201ENST00000248121 PRKCGP05129 697 aa23.6■■□□□ 1.37
SYNGR3-201ENST00000248121 PTPN2P17706 415 aa23.6■■□□□ 1.37
SYNGR3-201ENST00000248121 SPRP35270 261 aaPredicted RBP23.6■■□□□ 1.37
SYNGR3-201ENST00000248121 CDH4P55283 916 aa23.6■■□□□ 1.37
SYNGR3-201ENST00000248121 GNA12Q03113 381 aa23.6■■□□□ 1.37
SYNGR3-201ENST00000248121 PDPK2PQ6A1A2 396 aa23.6■■□□□ 1.37
SYNGR3-201ENST00000248121 C16orf46Q6P387 395 aa23.6■■□□□ 1.37
SYNGR3-201ENST00000248121 C10orf67Q8IYJ2 551 aa23.6■■□□□ 1.37
SYNGR3-201ENST00000248121 SLC25A41Q8N5S1 370 aa23.6■■□□□ 1.37
SYNGR3-201ENST00000248121 PPHLN1Q8NEY8 458 aaKnown RBP23.6■■□□□ 1.37
SYNGR3-201ENST00000248121 NSMCE1Q8WV22 266 aa23.6■■□□□ 1.37
SYNGR3-201ENST00000248121 C10orf82Q8WW14 230 aa23.6■■□□□ 1.37
SYNGR3-201ENST00000248121 ING5Q8WYH8 240 aa23.6■■□□□ 1.37
SYNGR3-201ENST00000248121 GCNAQ96QF7 691 aa23.6■■□□□ 1.37
SYNGR3-201ENST00000248121 MRM3Q9HC36 420 aaKnown RBP23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms