RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 NUMBLQ9Y6R0 609 aa17.21■□□□□ 0.35
CDKN1A-201ENST00000244741 DOCK4Q8N1I0 1966 aa17.21■□□□□ 0.35
CDKN1A-201ENST00000244741 IGLV3-10A0A075B6K4 115 aa17.21■□□□□ 0.34
CDKN1A-201ENST00000244741 SOBPA7XYQ1 873 aa17.21■□□□□ 0.34
CDKN1A-201ENST00000244741 ATP5HO75947 161 aa17.21■□□□□ 0.34
CDKN1A-201ENST00000244741 TROVE2P10155 538 aaKnown RBP eCLIP17.21■□□□□ 0.34
CDKN1A-201ENST00000244741 ZFXP17010 805 aaPredicted RBP17.21■□□□□ 0.34
CDKN1A-201ENST00000244741 GRIA1P42261 906 aa17.21■□□□□ 0.34
CDKN1A-201ENST00000244741 MAGEA3P43357 314 aa17.21■□□□□ 0.34
CDKN1A-201ENST00000244741 TNK2Q07912 1038 aa17.21■□□□□ 0.34
CDKN1A-201ENST00000244741 VITQ6UXI7 678 aa17.21■□□□□ 0.34
CDKN1A-201ENST00000244741 CDHR3Q6ZTQ4 885 aa17.21■□□□□ 0.34
CDKN1A-201ENST00000244741 OR52K2Q8NGK3 314 aa17.21■□□□□ 0.34
CDKN1A-201ENST00000244741 BPIFB1Q8TDL5 484 aa17.21■□□□□ 0.34
CDKN1A-201ENST00000244741 TTC17Q96AE7 1141 aa17.21■□□□□ 0.34
CDKN1A-201ENST00000244741 SIGLEC10Q96LC7 697 aa17.21■□□□□ 0.34
CDKN1A-201ENST00000244741 QKIQ96PU8 341 aaKnown RBP eCLIP17.21■□□□□ 0.34
CDKN1A-201ENST00000244741 LRMDAQ9H2I8 198 aa17.21■□□□□ 0.34
CDKN1A-201ENST00000244741 CATSPERBQ9H7T0 1116 aa17.21■□□□□ 0.34
CDKN1A-201ENST00000244741 ZMYM5Q9UJ78 669 aa17.21■□□□□ 0.34
CDKN1A-201ENST00000244741 L3MBTL1Q9Y468 752 aa17.21■□□□□ 0.34
CDKN1A-201ENST00000244741 DRGXA6NNA5 263 aa17.2■□□□□ 0.34
CDKN1A-201ENST00000244741 DFFAO00273 331 aa17.2■□□□□ 0.34
CDKN1A-201ENST00000244741 MBTPS2O43462 519 aa17.2■□□□□ 0.34
CDKN1A-201ENST00000244741 BGNP21810 368 aa17.2■□□□□ 0.34
CDKN1A-201ENST00000244741 OR1E1P30953 314 aa17.2■□□□□ 0.34
CDKN1A-201ENST00000244741 HOXC13P31276 330 aa17.2■□□□□ 0.34
CDKN1A-201ENST00000244741 NR2C2P49116 596 aa17.2■□□□□ 0.34
CDKN1A-201ENST00000244741 NRG1Q02297 640 aaPredicted RBP17.2■□□□□ 0.34
CDKN1A-201ENST00000244741 ANO4Q32M45 955 aa17.2■□□□□ 0.34
CDKN1A-201ENST00000244741 TAF1BQ53T94 588 aaPredicted RBP17.2■□□□□ 0.34
CDKN1A-201ENST00000244741 RABGAP1LQ5R372 815 aa17.2■□□□□ 0.34
CDKN1A-201ENST00000244741 C4orf22Q6V702 233 aa17.2■□□□□ 0.34
CDKN1A-201ENST00000244741 ARHGAP36Q6ZRI8 547 aa17.2■□□□□ 0.34
CDKN1A-201ENST00000244741 MTDHQ86UE4 582 aaKnown RBP17.2■□□□□ 0.34
CDKN1A-201ENST00000244741 CARNMT1Q8N4J0 409 aa17.2■□□□□ 0.34
CDKN1A-201ENST00000244741 RTL3Q8N8U3 475 aaKnown RBP17.2■□□□□ 0.34
CDKN1A-201ENST00000244741 LGMNQ99538 433 aa17.2■□□□□ 0.34
CDKN1A-201ENST00000244741 TSSK1BQ9BXA7 367 aa17.2■□□□□ 0.34
CDKN1A-201ENST00000244741 EBF3Q9H4W6 596 aa17.2■□□□□ 0.34
CDKN1A-201ENST00000244741 DUS2Q9NX74 493 aaKnown RBP17.2■□□□□ 0.34
CDKN1A-201ENST00000244741 MAD1L1Q9Y6D9 718 aa17.2■□□□□ 0.34
CDKN1A-201ENST00000244741 NUP210Q8TEM1 1887 aaPredicted RBP17.2■□□□□ 0.34
CDKN1A-201ENST00000244741 CBX6O95503 412 aa17.19■□□□□ 0.34
CDKN1A-201ENST00000244741 SNRPAP09012 282 aaKnown RBP17.19■□□□□ 0.34
CDKN1A-201ENST00000244741 ARSAP15289 507 aa17.19■□□□□ 0.34
CDKN1A-201ENST00000244741 LY6G5CQ5SRR4 150 aa17.19■□□□□ 0.34
CDKN1A-201ENST00000244741 ZNF449Q6P9G9 518 aa17.19■□□□□ 0.34
CDKN1A-201ENST00000244741 TRMT10BQ6PF06 316 aaKnown RBP17.19■□□□□ 0.34
CDKN1A-201ENST00000244741 ADGRG2Q8IZP9 1017 aa17.19■□□□□ 0.34
CDKN1A-201ENST00000244741 WFDC5Q8TCV5 224 aa17.19■□□□□ 0.34
CDKN1A-201ENST00000244741 ZNF398Q8TD17 642 aa17.19■□□□□ 0.34
CDKN1A-201ENST00000244741 SLC7A6OSQ96CW6 309 aaPredicted RBP17.19■□□□□ 0.34
CDKN1A-201ENST00000244741 LRRC39Q96DD0 335 aa17.19■□□□□ 0.34
CDKN1A-201ENST00000244741 NECTIN4Q96NY8 510 aa17.19■□□□□ 0.34
CDKN1A-201ENST00000244741 SRPK1Q96SB4 655 aaKnown RBP17.19■□□□□ 0.34
CDKN1A-201ENST00000244741 DDX50Q9BQ39 737 aaKnown RBP17.19■□□□□ 0.34
CDKN1A-201ENST00000244741 PPARGC1AQ9UBK2 798 aaKnown RBP17.19■□□□□ 0.34
CDKN1A-201ENST00000244741 ZNF180Q9UJW8 692 aa17.19■□□□□ 0.34
CDKN1A-201ENST00000244741 ZNF510Q9Y2H8 683 aa17.19■□□□□ 0.34
CDKN1A-201ENST00000244741 NEDD8-MDP1E9PL57 170 aa17.19■□□□□ 0.34
CDKN1A-201ENST00000244741 COPEO14579 308 aa17.19■□□□□ 0.34
CDKN1A-201ENST00000244741 FGF10O15520 208 aaPredicted RBP17.19■□□□□ 0.34
CDKN1A-201ENST00000244741 KRT37O76014 449 aa17.19■□□□□ 0.34
CDKN1A-201ENST00000244741 RHOQP17081 205 aa17.19■□□□□ 0.34
CDKN1A-201ENST00000244741 TPSB2P20231 275 aa17.19■□□□□ 0.34
CDKN1A-201ENST00000244741 PRKD1Q15139 912 aaPredicted RBP17.19■□□□□ 0.34
CDKN1A-201ENST00000244741 TPSAB1Q15661 275 aa17.19■□□□□ 0.34
CDKN1A-201ENST00000244741 FSCBQ5H9T9 825 aa17.19■□□□□ 0.34
CDKN1A-201ENST00000244741 ZNF354CQ86Y25 554 aa17.19■□□□□ 0.34
CDKN1A-201ENST00000244741 NAT16Q8N8M0 369 aa17.19■□□□□ 0.34
CDKN1A-201ENST00000244741 CCNYQ8ND76 341 aa17.19■□□□□ 0.34
CDKN1A-201ENST00000244741 EBNA1BP2Q99848 306 aaKnown RBP17.19■□□□□ 0.34
CDKN1A-201ENST00000244741 NOL6Q9H6R4 1146 aaKnown RBP17.19■□□□□ 0.34
CDKN1A-201ENST00000244741 ZNF212Q9UDV6 495 aa17.19■□□□□ 0.34
CDKN1A-201ENST00000244741 A0A0D9SEW6 157 aa17.18■□□□□ 0.34
CDKN1A-201ENST00000244741 OTOL1A6NHN0 477 aaPredicted RBP17.18■□□□□ 0.34
CDKN1A-201ENST00000244741 C2CD4DB7Z1M9 353 aa17.18■□□□□ 0.34
CDKN1A-201ENST00000244741 RFPL1O75677 317 aa17.18■□□□□ 0.34
CDKN1A-201ENST00000244741 LATS1O95835 1130 aa17.18■□□□□ 0.34
CDKN1A-201ENST00000244741 EZRP15311 586 aaKnown RBP17.18■□□□□ 0.34
CDKN1A-201ENST00000244741 VAV1P15498 845 aa17.18■□□□□ 0.34
CDKN1A-201ENST00000244741 SERPINB4P48594 390 aa17.18■□□□□ 0.34
CDKN1A-201ENST00000244741 SMAD4Q13485 552 aaKnown RBP17.18■□□□□ 0.34
CDKN1A-201ENST00000244741 BMPR2Q13873 1038 aa17.18■□□□□ 0.34
CDKN1A-201ENST00000244741 CCDC91Q7Z6B0 441 aa17.18■□□□□ 0.34
CDKN1A-201ENST00000244741 FAM217AQ8IXS0 508 aa17.18■□□□□ 0.34
CDKN1A-201ENST00000244741 STAMBPL1Q96FJ0 436 aa17.18■□□□□ 0.34
CDKN1A-201ENST00000244741 RAB3IPQ96QF0 476 aaPredicted RBP17.18■□□□□ 0.34
CDKN1A-201ENST00000244741 TRIM55Q9BYV6 548 aa17.18■□□□□ 0.34
CDKN1A-201ENST00000244741 SLC39A8Q9C0K1 460 aa17.18■□□□□ 0.34
CDKN1A-201ENST00000244741 TMEM248Q9NWD8 314 aa17.18■□□□□ 0.34
CDKN1A-201ENST00000244741 ZFP69BQ9UJL9 534 aa17.18■□□□□ 0.34
CDKN1A-201ENST00000244741 A0A0G2JND7 137 aa17.18■□□□□ 0.34
CDKN1A-201ENST00000244741 F5H423 210 aaPredicted RBP17.18■□□□□ 0.34
CDKN1A-201ENST00000244741 H0Y626 953 aa17.18■□□□□ 0.34
CDKN1A-201ENST00000244741 HOXD9P28356 352 aaPredicted RBP17.18■□□□□ 0.34
CDKN1A-201ENST00000244741 WEE1P30291 646 aa17.18■□□□□ 0.34
CDKN1A-201ENST00000244741 MTA1Q13330 715 aa17.18■□□□□ 0.34
CDKN1A-201ENST00000244741 PAFAH1B3Q15102 231 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms