RNA–Protein interactions for RNA: ENST00000225983.10

HDAC5-201, Transcript of histone deacetylase 5, humanhuman

APPRIS P3 TSL 5 BASIC

Gene HDAC5, Length 5,326 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-201ENST00000225983 CNGB3Q9NQW8 809 aa16.3■□□□□ 0.2
HDAC5-201ENST00000225983 CNTNAP1P78357 1384 aa16.3■□□□□ 0.2
HDAC5-201ENST00000225983 AGPSO00116 658 aa16.3■□□□□ 0.2
HDAC5-201ENST00000225983 MFSD11O43934 449 aa16.3■□□□□ 0.2
HDAC5-201ENST00000225983 CYP7B1O75881 506 aa16.3■□□□□ 0.2
HDAC5-201ENST00000225983 PGM3O95394 542 aa16.3■□□□□ 0.2
HDAC5-201ENST00000225983 HOXC6P09630 235 aa16.3■□□□□ 0.2
HDAC5-201ENST00000225983 CHRNB2P17787 502 aa16.3■□□□□ 0.2
HDAC5-201ENST00000225983 HK2P52789 917 aa16.3■□□□□ 0.2
HDAC5-201ENST00000225983 ZIK1Q3SY52 487 aaPredicted RBP16.3■□□□□ 0.2
HDAC5-201ENST00000225983 POM121L1PQ3SYA9 428 aa16.3■□□□□ 0.2
HDAC5-201ENST00000225983 AFTPHQ6ULP2 937 aa16.3■□□□□ 0.2
HDAC5-201ENST00000225983 PIWIL4Q7Z3Z4 852 aaKnown RBP16.3■□□□□ 0.2
HDAC5-201ENST00000225983 HOMEZQ8IX15 550 aa16.3■□□□□ 0.2
HDAC5-201ENST00000225983 C1orf127Q8N9H9 656 aa16.3■□□□□ 0.2
HDAC5-201ENST00000225983 PPTC7Q8NI37 304 aa16.3■□□□□ 0.2
HDAC5-201ENST00000225983 RP9Q8TA86 221 aaKnown RBP16.3■□□□□ 0.2
HDAC5-201ENST00000225983 APOL4Q9BPW4 351 aa16.3■□□□□ 0.2
HDAC5-201ENST00000225983 TSEN34Q9BSV6 310 aaKnown RBP16.3■□□□□ 0.2
HDAC5-201ENST00000225983 CDH19Q9H159 772 aa16.3■□□□□ 0.2
HDAC5-201ENST00000225983 H3BN98 237 aa16.29■□□□□ 0.2
HDAC5-201ENST00000225983 LINC00032P0C843 101 aa16.29■□□□□ 0.2
HDAC5-201ENST00000225983 ALFQ53S48 1182 aa16.29■□□□□ 0.2
HDAC5-201ENST00000225983 PLD5Q8N7P1 536 aa16.29■□□□□ 0.2
HDAC5-201ENST00000225983 NACC2Q96BF6 587 aa16.29■□□□□ 0.2
HDAC5-201ENST00000225983 C2orf49Q9BVC5 232 aaPredicted RBP16.29■□□□□ 0.2
HDAC5-201ENST00000225983 SLC4A5Q9BY07 1137 aa16.29■□□□□ 0.2
HDAC5-201ENST00000225983 HMX1Q9NP08 348 aaPredicted RBP16.29■□□□□ 0.2
HDAC5-201ENST00000225983 GTF2A1LQ9UNN4 478 aa16.29■□□□□ 0.2
HDAC5-201ENST00000225983 PAGE1O75459 146 aa16.29■□□□□ 0.2
HDAC5-201ENST00000225983 CDH13P55290 713 aa16.29■□□□□ 0.2
HDAC5-201ENST00000225983 MAPK11Q15759 364 aa16.29■□□□□ 0.2
HDAC5-201ENST00000225983 MFSD5Q6N075 450 aa16.29■□□□□ 0.2
HDAC5-201ENST00000225983 TRAPPC5Q8IUR0 188 aa16.29■□□□□ 0.2
HDAC5-201ENST00000225983 FAM105AQ9NUU6 356 aa16.29■□□□□ 0.2
HDAC5-201ENST00000225983 AJAP1Q9UKB5 411 aaPredicted RBP16.29■□□□□ 0.2
HDAC5-201ENST00000225983 TBL1XO60907 577 aa16.29■□□□□ 0.2
HDAC5-201ENST00000225983 NTRK1P04629 796 aa16.29■□□□□ 0.2
HDAC5-201ENST00000225983 MSX2P35548 267 aaPredicted RBP16.29■□□□□ 0.2
HDAC5-201ENST00000225983 PIK3CGP48736 1102 aa16.29■□□□□ 0.2
HDAC5-201ENST00000225983 WNT3AP56704 352 aa16.29■□□□□ 0.2
HDAC5-201ENST00000225983 PDK3Q15120 406 aa16.29■□□□□ 0.2
HDAC5-201ENST00000225983 SETMARQ53H47 684 aaPredicted RBP16.29■□□□□ 0.2
HDAC5-201ENST00000225983 PPM1LQ5SGD2 360 aa16.29■□□□□ 0.2
HDAC5-201ENST00000225983 GSTCDQ8NEC7 633 aa16.29■□□□□ 0.2
HDAC5-201ENST00000225983 ZCCHC2Q9C0B9 1178 aaKnown RBP16.29■□□□□ 0.2
HDAC5-201ENST00000225983 NOCTQ9UK39 431 aaKnown RBP16.29■□□□□ 0.2
HDAC5-201ENST00000225983 SMIM28A0A1B0GU29 152 aa16.29■□□□□ 0.2
HDAC5-201ENST00000225983 EPN2O95208 641 aa16.29■□□□□ 0.2
HDAC5-201ENST00000225983 ANXA5P08758 320 aa16.29■□□□□ 0.2
HDAC5-201ENST00000225983 CTPS1P17812 591 aa16.29■□□□□ 0.2
HDAC5-201ENST00000225983 ARL2P36404 184 aa16.29■□□□□ 0.2
HDAC5-201ENST00000225983 CEP78Q5JTW2 689 aa16.29■□□□□ 0.2
HDAC5-201ENST00000225983 HEATR4Q86WZ0 1026 aa16.29■□□□□ 0.2
HDAC5-201ENST00000225983 RPS6KB2Q9UBS0 482 aa16.29■□□□□ 0.2
HDAC5-201ENST00000225983 IGKV6D-41A0A0C4DH26 115 aa16.28■□□□□ 0.2
HDAC5-201ENST00000225983 TRIM38O00635 465 aa16.28■□□□□ 0.2
HDAC5-201ENST00000225983 PFKPQ01813 784 aa16.28■□□□□ 0.2
HDAC5-201ENST00000225983 IRF8Q02556 426 aa16.28■□□□□ 0.2
HDAC5-201ENST00000225983 C1DQ13901 141 aaKnown RBP16.28■□□□□ 0.2
HDAC5-201ENST00000225983 TRIM25Q14258 630 aaKnown RBP16.28■□□□□ 0.2
HDAC5-201ENST00000225983 OTOP3Q7RTS5 596 aa16.28■□□□□ 0.2
HDAC5-201ENST00000225983 CAMK1DQ8IU85 385 aa16.28■□□□□ 0.2
HDAC5-201ENST00000225983 CLEC4DQ8WXI8 215 aa16.28■□□□□ 0.2
HDAC5-201ENST00000225983 ELMO1Q92556 727 aa16.28■□□□□ 0.2
HDAC5-201ENST00000225983 WDR55Q9H6Y2 383 aaPredicted RBP16.28■□□□□ 0.2
HDAC5-201ENST00000225983 SIX2Q9NPC8 291 aa16.28■□□□□ 0.2
HDAC5-201ENST00000225983 PLLPQ9Y342 182 aa16.28■□□□□ 0.2
HDAC5-201ENST00000225983 A0A087WXM4 84 aa16.28■□□□□ 0.2
HDAC5-201ENST00000225983 VN1R5Q7Z5H4 357 aa16.28■□□□□ 0.2
HDAC5-201ENST00000225983 DAPK2Q9UIK4 370 aa16.28■□□□□ 0.2
HDAC5-201ENST00000225983 GNPTGQ9UJJ9 305 aa16.28■□□□□ 0.2
HDAC5-201ENST00000225983 SF3B1O75533 1304 aaKnown RBP eCLIP16.28■□□□□ 0.25e-6■■■■■ 114.8
HDAC5-201ENST00000225983 RPL9P32969 192 aaKnown RBP16.28■□□□□ 0.2
HDAC5-201ENST00000225983 RPL38P63173 70 aaKnown RBP16.28■□□□□ 0.2
HDAC5-201ENST00000225983 ANGPT1Q15389 498 aa16.28■□□□□ 0.2
HDAC5-201ENST00000225983 PMF1Q6P1K2 205 aa16.28■□□□□ 0.2
HDAC5-201ENST00000225983 CASP12Q6UXS9 341 aa16.28■□□□□ 0.2
HDAC5-201ENST00000225983 AMIGO2Q86SJ2 522 aa16.28■□□□□ 0.2
HDAC5-201ENST00000225983 ECHDC2Q86YB7 292 aa16.28■□□□□ 0.2
HDAC5-201ENST00000225983 SETD9Q8NE22 299 aa16.28■□□□□ 0.2
HDAC5-201ENST00000225983 TFAP2BQ92481 460 aa16.28■□□□□ 0.2
HDAC5-201ENST00000225983 PIK3C2AO00443 1686 aa16.28■□□□□ 0.2
HDAC5-201ENST00000225983 POLR2EP19388 210 aaKnown RBP16.28■□□□□ 0.2
HDAC5-201ENST00000225983 TTPAP49638 278 aa16.28■□□□□ 0.2
HDAC5-201ENST00000225983 POLR2LP62875 67 aaKnown RBP16.28■□□□□ 0.2
HDAC5-201ENST00000225983 DGCR6Q14129 220 aa16.28■□□□□ 0.2
HDAC5-201ENST00000225983 FNDC3BQ53EP0 1204 aaKnown RBP16.28■□□□□ 0.2
HDAC5-201ENST00000225983 STRADAQ7RTN6 431 aa16.28■□□□□ 0.2
HDAC5-201ENST00000225983 NMUR2Q9GZQ4 415 aa16.28■□□□□ 0.2
HDAC5-201ENST00000225983 PDZD7Q9H5P4 517 aa16.28■□□□□ 0.2
HDAC5-201ENST00000225983 APOBEC3GQ9HC16 384 aaKnown RBP16.28■□□□□ 0.2
HDAC5-201ENST00000225983 RAD18Q9NS91 495 aa16.28■□□□□ 0.2
HDAC5-201ENST00000225983 AMHP03971 560 aa16.27■□□□□ 0.2
HDAC5-201ENST00000225983 HDCP19113 662 aa16.27■□□□□ 0.2
HDAC5-201ENST00000225983 HPCAL1P37235 193 aa16.27■□□□□ 0.2
HDAC5-201ENST00000225983 PTGIRP43119 386 aa16.27■□□□□ 0.2
HDAC5-201ENST00000225983 SVOPQ8N4V2 548 aa16.27■□□□□ 0.2
HDAC5-201ENST00000225983 RDH11Q8TC12 318 aa16.27■□□□□ 0.2
HDAC5-201ENST00000225983 TPRKBQ9Y3C4 175 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms