RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 ERAP2Q6P179 960 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 IQCF2Q8IXL9 164 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 SLC9A6Q92581 669 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 CINPQ9BW66 212 aaPredicted RBP11.17□□□□□ -0.62
USP31-201ENST00000219689 ITGA11Q9UKX5 1188 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 CENPBD1B2RD01 187 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 NUDT17P0C025 328 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 MYBPC3Q14896 1274 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 RMDN3Q96TC7 470 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 APBA2Q99767 749 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 COQ10BQ9H8M1 238 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 NFKB1P19838 968 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 ILF2Q12905 390 aaKnown RBP11.17□□□□□ -0.62
USP31-201ENST00000219689 ORC1Q13415 861 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 ARHGEF6Q15052 776 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 PRR5LQ6MZQ0 368 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 ACTL9Q8TC94 416 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 C11orf24Q96F05 449 aaPredicted RBP11.17□□□□□ -0.62
USP31-201ENST00000219689 BTBD9Q96Q07 612 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 CHCHD6Q9BRQ6 235 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 CADM1Q9BY67 442 aaKnown RBP11.17□□□□□ -0.62
USP31-201ENST00000219689 LRFN2Q9ULH4 789 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 P2RY8Q86VZ1 359 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 GPR63Q9BZJ6 419 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 PCDHA3Q9Y5H8 950 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 ACTL7BQ9Y614 415 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 U3KQV3 271 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 KIAA0391O15091 583 aaKnown RBP11.17□□□□□ -0.62
USP31-201ENST00000219689 CDC42P60953 191 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 SPPL2CQ8IUH8 684 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 TNS4Q8IZW8 715 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 PNPT1Q8TCS8 783 aaKnown RBP11.17□□□□□ -0.62
USP31-201ENST00000219689 CEP41Q9BYV8 373 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 PRDM16Q9HAZ2 1276 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 PCDHA11Q9Y5I1 949 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 ST14Q9Y5Y6 855 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 GLI2P10070 1586 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 EPB42P16452 691 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 MXD1Q05195 221 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 FIGNQ5HY92 759 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 SPANXN3Q5MJ09 141 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 WDR45BQ5MNZ6 344 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 ZNF302Q9NR11 478 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 MED11Q9P086 117 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 SCN9AQ15858 1988 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 PTPRZ1P23471 2315 aaPredicted RBP11.17□□□□□ -0.62
USP31-201ENST00000219689 TET3O43151 1660 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 PLA2G6O60733 806 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 ITGB1P05556 798 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 EPHA3P29320 983 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 ALX1Q15699 326 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 SLC22A4Q9H015 551 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 PNPOQ9NVS9 261 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.17□□□□□ -0.62
USP31-201ENST00000219689 RAD54BQ9Y620 910 aa11.17□□□□□ -0.62
USP31-201ENST00000219689 GRK4P32298 578 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 MAFIPQ8WZ33 124 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 TMCO6Q96DC7 493 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 TREM1Q9NP99 234 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 MAGEB16A2A368 324 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 SGTAO43765 313 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 PORP16435 677 aaPredicted RBP11.16□□□□□ -0.62
USP31-201ENST00000219689 SPIBQ01892 262 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 CXorf57Q6NSI4 855 aaKnown RBP11.16□□□□□ -0.62
USP31-201ENST00000219689 TMPRSS11AQ6ZMR5 421 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 COLGALT1Q8NBJ5 622 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 TNFRSF25Q93038 417 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 RAD18Q9NS91 495 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 ZNF451Q9Y4E5 1061 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 USP42Q9H9J4 1324 aaKnown RBP11.16□□□□□ -0.62
USP31-201ENST00000219689 ZNF14P17017 642 aaPredicted RBP11.16□□□□□ -0.62
USP31-201ENST00000219689 ACVR2BQ13705 512 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 TMEM132DQ14C87 1099 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 R3HCC1LQ7Z5L2 792 aaKnown RBP11.16□□□□□ -0.62
USP31-201ENST00000219689 MED8Q96G25 268 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 AGPSO00116 658 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 AIREO43918 545 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 PENKP01210 267 aaPredicted RBP11.16□□□□□ -0.62
USP31-201ENST00000219689 CRABP2P29373 138 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 CLK2P49760 499 aaKnown RBP11.16□□□□□ -0.62
USP31-201ENST00000219689 BTBD8Q5XKL5 378 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 USP43Q70EL4 1123 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 PIGWQ7Z7B1 504 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 DEPDC4Q8N2C3 294 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 ART4Q93070 314 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 HEPHQ9BQS7 1158 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 PRDM5Q9NQX1 630 aaPredicted RBP11.16□□□□□ -0.62
USP31-201ENST00000219689 AGPAT3Q9NRZ7 376 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 RASSF1Q9NS23 344 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 POLIQ9UNA4 740 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 SLC7A2P52569 658 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 CRADDP78560 199 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 THAP5Q7Z6K1 395 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 RUSC1Q9BVN2 902 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 CNTNAP2Q9UHC6 1331 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 ABCG1P45844 678 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 ZNF45Q02386 682 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 E2F2Q14209 437 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 ZNF549Q6P9A3 640 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 ARHGAP27Q6ZUM4 889 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms