RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 CR2P20023 1033 aa14.46□□□□□ -0.09
RTFDC1-201ENST00000023939 SGSHP51688 502 aa14.46□□□□□ -0.09
RTFDC1-201ENST00000023939 SLC7A9P82251 487 aa14.46□□□□□ -0.09
RTFDC1-201ENST00000023939 FPGSQ05932 587 aa14.46□□□□□ -0.09
RTFDC1-201ENST00000023939 CDK18Q07002 472 aa14.46□□□□□ -0.09
RTFDC1-201ENST00000023939 ACTN3Q08043 901 aaPredicted RBP14.46□□□□□ -0.09
RTFDC1-201ENST00000023939 ILF2Q12905 390 aaKnown RBP14.46□□□□□ -0.09
RTFDC1-201ENST00000023939 CNGA3Q16281 694 aa14.46□□□□□ -0.09
RTFDC1-201ENST00000023939 SIRPB2Q5JXA9 342 aa14.46□□□□□ -0.09
RTFDC1-201ENST00000023939 N4BP2L1Q5TBK1 243 aaPredicted RBP14.46□□□□□ -0.09
RTFDC1-201ENST00000023939 RTL10Q7L3V2 364 aa14.46□□□□□ -0.09
RTFDC1-201ENST00000023939 NUDCD3Q8IVD9 361 aa14.46□□□□□ -0.09
RTFDC1-201ENST00000023939 SLC25A41Q8N5S1 370 aa14.46□□□□□ -0.09
RTFDC1-201ENST00000023939 KLHL23Q8NBE8 558 aa14.46□□□□□ -0.09
RTFDC1-201ENST00000023939 HJURPQ8NCD3 748 aaPredicted RBP14.46□□□□□ -0.09
RTFDC1-201ENST00000023939 C2CD4AQ8NCU7 369 aaPredicted RBP14.46□□□□□ -0.09
RTFDC1-201ENST00000023939 GABPB2Q8TAK5 448 aaPredicted RBP14.46□□□□□ -0.09
RTFDC1-201ENST00000023939 E2F7Q96AV8 911 aa14.46□□□□□ -0.09
RTFDC1-201ENST00000023939 ATXN3LQ9H3M9 355 aa14.46□□□□□ -0.09
RTFDC1-201ENST00000023939 ALG13Q9NP73 1137 aaKnown RBP14.46□□□□□ -0.09
RTFDC1-201ENST00000023939 ABCF3Q9NUQ8 709 aa14.46□□□□□ -0.09
RTFDC1-201ENST00000023939 SLC12A4Q9UP95 1085 aa14.46□□□□□ -0.09
RTFDC1-201ENST00000023939 SLC7A4O43246 635 aa14.46□□□□□ -0.1
RTFDC1-201ENST00000023939 CXCL14O95715 111 aa14.46□□□□□ -0.1
RTFDC1-201ENST00000023939 C1RP00736 705 aa14.46□□□□□ -0.1
RTFDC1-201ENST00000023939 PROCP04070 461 aa14.46□□□□□ -0.1
RTFDC1-201ENST00000023939 PRKCGP05129 697 aa14.46□□□□□ -0.1
RTFDC1-201ENST00000023939 SERPINF2P08697 491 aa14.46□□□□□ -0.1
RTFDC1-201ENST00000023939 IRF1P10914 325 aa14.46□□□□□ -0.1
RTFDC1-201ENST00000023939 HDCP19113 662 aa14.46□□□□□ -0.1
RTFDC1-201ENST00000023939 GABRB3P28472 473 aa14.46□□□□□ -0.1
RTFDC1-201ENST00000023939 ALDH3A1P30838 453 aa14.46□□□□□ -0.1
RTFDC1-201ENST00000023939 MAGEA9P43362 315 aa14.46□□□□□ -0.1
RTFDC1-201ENST00000023939 ACVR1Q04771 509 aa14.46□□□□□ -0.1
RTFDC1-201ENST00000023939 CCDC153Q494R4 210 aa14.46□□□□□ -0.1
RTFDC1-201ENST00000023939 GAREM2Q75VX8 874 aa14.46□□□□□ -0.1
RTFDC1-201ENST00000023939 LMNTD2Q8IXW0 634 aa14.46□□□□□ -0.1
RTFDC1-201ENST00000023939 ARL14EPQ8N8R7 260 aaPredicted RBP14.46□□□□□ -0.1
RTFDC1-201ENST00000023939 CALML6Q8TD86 181 aa14.46□□□□□ -0.1
RTFDC1-201ENST00000023939 MRPS31Q92665 395 aaKnown RBP14.46□□□□□ -0.1
RTFDC1-201ENST00000023939 TRIB3Q96RU7 358 aa14.46□□□□□ -0.1
RTFDC1-201ENST00000023939 SLC22A12Q96S37 553 aa14.46□□□□□ -0.1
RTFDC1-201ENST00000023939 RAD9AQ99638 391 aa14.46□□□□□ -0.1
RTFDC1-201ENST00000023939 SPON2Q9BUD6 331 aa14.46□□□□□ -0.1
RTFDC1-201ENST00000023939 SMPD4Q9NXE4 827 aa14.46□□□□□ -0.1
RTFDC1-201ENST00000023939 SLC2A6Q9UGQ3 507 aa14.46□□□□□ -0.1
RTFDC1-201ENST00000023939 ANKRD6Q9Y2G4 727 aa14.46□□□□□ -0.1
RTFDC1-201ENST00000023939 ZNF510Q9Y2H8 683 aa14.46□□□□□ -0.1
RTFDC1-201ENST00000023939 ARIH1Q9Y4X5 557 aaPredicted RBP14.46□□□□□ -0.1
RTFDC1-201ENST00000023939 SNNO75324 88 aaPredicted RBP14.45□□□□□ -0.1
RTFDC1-201ENST00000023939 LRG1P02750 347 aa14.45□□□□□ -0.1
RTFDC1-201ENST00000023939 AHSGP02765 367 aa14.45□□□□□ -0.1
RTFDC1-201ENST00000023939 NEFHP12036 1026 aa14.45□□□□□ -0.1
RTFDC1-201ENST00000023939 LBX1P52954 281 aa14.45□□□□□ -0.1
RTFDC1-201ENST00000023939 OCRLQ01968 901 aa14.45□□□□□ -0.1
RTFDC1-201ENST00000023939 THOC5Q13769 683 aaKnown RBP14.45□□□□□ -0.1
RTFDC1-201ENST00000023939 PPM1JQ5JR12 505 aa14.45□□□□□ -0.1
RTFDC1-201ENST00000023939 SPDYAQ5MJ70 313 aa14.45□□□□□ -0.1
RTFDC1-201ENST00000023939 TMEM240Q5SV17 173 aa14.45□□□□□ -0.1
RTFDC1-201ENST00000023939 TXNDC8Q6A555 127 aa14.45□□□□□ -0.1
RTFDC1-201ENST00000023939 NEPROQ6NW34 567 aa14.45□□□□□ -0.1
RTFDC1-201ENST00000023939 PSRC1Q6PGN9 363 aaPredicted RBP14.45□□□□□ -0.1
RTFDC1-201ENST00000023939 HTR3DQ70Z44 454 aa14.45□□□□□ -0.1
RTFDC1-201ENST00000023939 KDELC2Q7Z4H8 507 aa14.45□□□□□ -0.1
RTFDC1-201ENST00000023939 PHOSPHO2Q8TCD6 241 aa14.45□□□□□ -0.1
RTFDC1-201ENST00000023939 RMDN2Q96LZ7 410 aa14.45□□□□□ -0.1
RTFDC1-201ENST00000023939 CYP2S1Q96SQ9 504 aa14.45□□□□□ -0.1
RTFDC1-201ENST00000023939 ZBED2Q9BTP6 218 aa14.45□□□□□ -0.1
RTFDC1-201ENST00000023939 CINPQ9BW66 212 aaPredicted RBP14.45□□□□□ -0.1
RTFDC1-201ENST00000023939 EMILIN2Q9BXX0 1053 aa14.45□□□□□ -0.1
RTFDC1-201ENST00000023939 TRIM55Q9BYV6 548 aa14.45□□□□□ -0.1
RTFDC1-201ENST00000023939 TRPC7Q9HCX4 862 aa14.45□□□□□ -0.1
RTFDC1-201ENST00000023939 CPQQ9Y646 472 aa14.45□□□□□ -0.1
RTFDC1-201ENST00000023939 OBSL1O75147 1896 aa14.45□□□□□ -0.1
RTFDC1-201ENST00000023939 A0A096LPK6 155 aa14.44□□□□□ -0.1
RTFDC1-201ENST00000023939 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.44□□□□□ -0.1
RTFDC1-201ENST00000023939 ZMPSTE24O75844 475 aa14.44□□□□□ -0.1
RTFDC1-201ENST00000023939 DCTN3O75935 186 aa14.44□□□□□ -0.1
RTFDC1-201ENST00000023939 NDST3O95803 873 aa14.44□□□□□ -0.1
RTFDC1-201ENST00000023939 C2P06681 752 aa14.44□□□□□ -0.1
RTFDC1-201ENST00000023939 SPATA31D3P0C874 917 aa14.44□□□□□ -0.1
RTFDC1-201ENST00000023939 COL6A2P12110 1019 aa14.44□□□□□ -0.1
RTFDC1-201ENST00000023939 GABRR2P28476 465 aa14.44□□□□□ -0.1
RTFDC1-201ENST00000023939 CDC25CP30307 473 aa14.44□□□□□ -0.1
RTFDC1-201ENST00000023939 SCTRP47872 440 aa14.44□□□□□ -0.1
RTFDC1-201ENST00000023939 NSUN2Q08J23 767 aaKnown RBP eCLIP14.44□□□□□ -0.1
RTFDC1-201ENST00000023939 BST1Q10588 318 aa14.44□□□□□ -0.1
RTFDC1-201ENST00000023939 SF3A3Q12874 501 aaKnown RBP eCLIP14.44□□□□□ -0.16e-9■■■■■ 59.3
RTFDC1-201ENST00000023939 SEPT6Q14141 434 aa14.44□□□□□ -0.1
RTFDC1-201ENST00000023939 GRM3Q14832 879 aa14.44□□□□□ -0.1
RTFDC1-201ENST00000023939 CYTH1Q15438 398 aa14.44□□□□□ -0.1
RTFDC1-201ENST00000023939 SMAD1Q15797 465 aaKnown RBP14.44□□□□□ -0.1
RTFDC1-201ENST00000023939 SPRED3Q2MJR0 410 aa14.44□□□□□ -0.1
RTFDC1-201ENST00000023939 RNF219Q5W0B1 726 aaPredicted RBP14.44□□□□□ -0.1
RTFDC1-201ENST00000023939 SPATA31D4Q6ZUB0 917 aa14.44□□□□□ -0.1
RTFDC1-201ENST00000023939 CMC1Q7Z7K0 106 aa14.44□□□□□ -0.1
RTFDC1-201ENST00000023939 CPXM2Q8N436 756 aa14.44□□□□□ -0.1
RTFDC1-201ENST00000023939 KREMEN2Q8NCW0 462 aa14.44□□□□□ -0.1
RTFDC1-201ENST00000023939 OR13J1Q8NGT2 312 aa14.44□□□□□ -0.1
RTFDC1-201ENST00000023939 HERVK_113Q902F9 699 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms