RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 APTXQ7Z2E3 356 aaKnown RBP16.12■□□□□ 0.17
ERCC1-201ENST00000013807 RTL3Q8N8U3 475 aaKnown RBP16.12■□□□□ 0.17
ERCC1-201ENST00000013807 HCAR2Q8TDS4 363 aa16.12■□□□□ 0.17
ERCC1-201ENST00000013807 APOLD1Q96LR9 279 aa16.12■□□□□ 0.17
ERCC1-201ENST00000013807 TBATAQ96M53 351 aa16.12■□□□□ 0.17
ERCC1-201ENST00000013807 CPEB1Q9BZB8 566 aaKnown RBP16.12■□□□□ 0.17
ERCC1-201ENST00000013807 TM6SF2Q9BZW4 377 aa16.12■□□□□ 0.17
ERCC1-201ENST00000013807 ZDHHC6Q9H6R6 413 aa16.12■□□□□ 0.17
ERCC1-201ENST00000013807 DKK3Q9UBP4 350 aa16.12■□□□□ 0.17
ERCC1-201ENST00000013807 KALRNO60229 2985 aa16.12■□□□□ 0.17
ERCC1-201ENST00000013807 KIF26BQ2KJY2 2108 aa16.12■□□□□ 0.17
ERCC1-201ENST00000013807 LRP4O75096 1905 aa16.11■□□□□ 0.17
ERCC1-201ENST00000013807 HELZ2Q9BYK8 2649 aaKnown RBP16.11■□□□□ 0.17
ERCC1-201ENST00000013807 GCN1Q92616 2671 aaKnown RBP16.11■□□□□ 0.17
ERCC1-201ENST00000013807 IGLON5A6NGN9 336 aa16.11■□□□□ 0.17
ERCC1-201ENST00000013807 K7ESM1 405 aa16.11■□□□□ 0.17
ERCC1-201ENST00000013807 FPGTO14772 594 aa16.11■□□□□ 0.17
ERCC1-201ENST00000013807 TPP1O14773 563 aa16.11■□□□□ 0.17
ERCC1-201ENST00000013807 TLX3O43711 291 aaPredicted RBP16.11■□□□□ 0.17
ERCC1-201ENST00000013807 GJB6O95452 261 aa16.11■□□□□ 0.17
ERCC1-201ENST00000013807 MT-CO3P00414 261 aa16.11■□□□□ 0.17
ERCC1-201ENST00000013807 ABL2P42684 1182 aa16.11■□□□□ 0.17
ERCC1-201ENST00000013807 DUSP3P51452 185 aaPredicted RBP16.11■□□□□ 0.17
ERCC1-201ENST00000013807 DAB2P98082 770 aa16.11■□□□□ 0.17
ERCC1-201ENST00000013807 SGCGQ13326 291 aa16.11■□□□□ 0.17
ERCC1-201ENST00000013807 PARGQ86W56 976 aa16.11■□□□□ 0.17
ERCC1-201ENST00000013807 UMODL1-AS1Q8N2C9 162 aa16.11■□□□□ 0.17
ERCC1-201ENST00000013807 SELENOOQ9BVL4 669 aa16.11■□□□□ 0.17
ERCC1-201ENST00000013807 TTYH3Q9C0H2 523 aa16.11■□□□□ 0.17
ERCC1-201ENST00000013807 HSD3B7Q9H2F3 369 aa16.11■□□□□ 0.17
ERCC1-201ENST00000013807 DNAJC28Q9NX36 388 aa16.11■□□□□ 0.17
ERCC1-201ENST00000013807 NCKIPSDQ9NZQ3 722 aa16.11■□□□□ 0.17
ERCC1-201ENST00000013807 KLF15Q9UIH9 416 aa16.11■□□□□ 0.17
ERCC1-201ENST00000013807 SALL4Q9UJQ4 1053 aa16.11■□□□□ 0.17
ERCC1-201ENST00000013807 AK5Q9Y6K8 562 aa16.11■□□□□ 0.17
ERCC1-201ENST00000013807 OPA1O60313 960 aa16.1■□□□□ 0.17
ERCC1-201ENST00000013807 GKP32189 559 aa16.1■□□□□ 0.17
ERCC1-201ENST00000013807 HTR7P34969 479 aa16.1■□□□□ 0.17
ERCC1-201ENST00000013807 ABCG1P45844 678 aa16.1■□□□□ 0.17
ERCC1-201ENST00000013807 SUOXP51687 545 aa16.1■□□□□ 0.17
ERCC1-201ENST00000013807 YPEL5P62699 121 aa16.1■□□□□ 0.17
ERCC1-201ENST00000013807 MYL5Q02045 173 aa16.1■□□□□ 0.17
ERCC1-201ENST00000013807 MAPK8IP2Q13387 824 aaPredicted RBP16.1■□□□□ 0.17
ERCC1-201ENST00000013807 PARP15Q460N3 678 aa16.1■□□□□ 0.17
ERCC1-201ENST00000013807 ZCCHC8Q6NZY4 707 aaKnown RBP16.1■□□□□ 0.17
ERCC1-201ENST00000013807 GDPD4Q6W3E5 623 aa16.1■□□□□ 0.17
ERCC1-201ENST00000013807 PTAR1Q7Z6K3 402 aaPredicted RBP16.1■□□□□ 0.17
ERCC1-201ENST00000013807 PHLDB2Q86SQ0 1253 aa16.1■□□□□ 0.17
ERCC1-201ENST00000013807 ZNF548Q8NEK5 533 aaPredicted RBP16.1■□□□□ 0.17
ERCC1-201ENST00000013807 ANKRD20A12PQ8NF67 263 aa16.1■□□□□ 0.17
ERCC1-201ENST00000013807 NEK11Q8NG66 645 aa16.1■□□□□ 0.17
ERCC1-201ENST00000013807 BAP1Q92560 729 aa16.1■□□□□ 0.17
ERCC1-201ENST00000013807 FGF11Q92914 225 aa16.1■□□□□ 0.17
ERCC1-201ENST00000013807 VCPIP1Q96JH7 1222 aa16.1■□□□□ 0.17
ERCC1-201ENST00000013807 AGPAT1Q99943 283 aa16.1■□□□□ 0.17
ERCC1-201ENST00000013807 CNPY3Q9BT09 278 aa16.1■□□□□ 0.17
ERCC1-201ENST00000013807 EVA1BQ9NVM1 165 aa16.1■□□□□ 0.17
ERCC1-201ENST00000013807 ANO10Q9NW15 660 aa16.1■□□□□ 0.17
ERCC1-201ENST00000013807 FZD10Q9ULW2 581 aa16.1■□□□□ 0.17
ERCC1-201ENST00000013807 UNC13CQ8NB66 2214 aa16.09■□□□□ 0.17
ERCC1-201ENST00000013807 H3BM21 787 aa16.09■□□□□ 0.17
ERCC1-201ENST00000013807 KRIT1O00522 736 aa16.09■□□□□ 0.17
ERCC1-201ENST00000013807 DXOO77932 396 aaKnown RBP16.09■□□□□ 0.17
ERCC1-201ENST00000013807 TMCC1O94876 653 aa16.09■□□□□ 0.17
ERCC1-201ENST00000013807 UGT2B4P06133 528 aa16.09■□□□□ 0.17
ERCC1-201ENST00000013807 EPHB2P29323 1055 aa16.09■□□□□ 0.17
ERCC1-201ENST00000013807 RPL7AP62424 266 aaKnown RBP16.09■□□□□ 0.17
ERCC1-201ENST00000013807 SEMG2Q02383 582 aa16.09■□□□□ 0.17
ERCC1-201ENST00000013807 RAD51Q06609 339 aa16.09■□□□□ 0.17
ERCC1-201ENST00000013807 EIF2B5Q13144 721 aaKnown RBP16.09■□□□□ 0.17
ERCC1-201ENST00000013807 SERINC3Q13530 473 aa16.09■□□□□ 0.17
ERCC1-201ENST00000013807 NCAPHQ15003 741 aa16.09■□□□□ 0.17
ERCC1-201ENST00000013807 ACAP1Q15027 740 aa16.09■□□□□ 0.17
ERCC1-201ENST00000013807 EFHC2Q5JST6 749 aa16.09■□□□□ 0.17
ERCC1-201ENST00000013807 PYROXD2Q8N2H3 581 aa16.09■□□□□ 0.17
ERCC1-201ENST00000013807 OR6K2Q8NGY2 324 aa16.09■□□□□ 0.17
ERCC1-201ENST00000013807 BTN2A2Q8WVV5 523 aa16.09■□□□□ 0.17
ERCC1-201ENST00000013807 GRAMD1AQ96CP6 724 aa16.09■□□□□ 0.17
ERCC1-201ENST00000013807 GDAP1L1Q96MZ0 367 aa16.09■□□□□ 0.17
ERCC1-201ENST00000013807 KLHL32Q96NJ5 620 aa16.09■□□□□ 0.17
ERCC1-201ENST00000013807 BBC3Q96PG8 261 aaPredicted RBP16.09■□□□□ 0.17
ERCC1-201ENST00000013807 SYT11Q9BT88 431 aa16.09■□□□□ 0.17
ERCC1-201ENST00000013807 PRORYQ9H606 182 aa16.09■□□□□ 0.17
ERCC1-201ENST00000013807 CAAP1Q9H8G2 361 aa16.09■□□□□ 0.17
ERCC1-201ENST00000013807 DONSONQ9NYP3 566 aa16.09■□□□□ 0.17
ERCC1-201ENST00000013807 GGT7Q9UJ14 662 aa16.09■□□□□ 0.17
ERCC1-201ENST00000013807 ARHGEF17Q96PE2 2063 aaPredicted RBP16.08■□□□□ 0.16
ERCC1-201ENST00000013807 EME2A4GXA9 379 aaPredicted RBP16.08■□□□□ 0.16
ERCC1-201ENST00000013807 FFAR2O15552 330 aa16.08■□□□□ 0.16
ERCC1-201ENST00000013807 RRP8O43159 456 aaKnown RBP16.08■□□□□ 0.16
ERCC1-201ENST00000013807 CCP110O43303 1012 aa16.08■□□□□ 0.16
ERCC1-201ENST00000013807 BUB1O43683 1085 aa16.08■□□□□ 0.16
ERCC1-201ENST00000013807 BRINP1O60477 761 aa16.08■□□□□ 0.16
ERCC1-201ENST00000013807 CCDC172P0C7W6 258 aa16.08■□□□□ 0.16
ERCC1-201ENST00000013807 ACTN2P35609 894 aa16.08■□□□□ 0.16
ERCC1-201ENST00000013807 UBXN1Q04323 297 aa16.08■□□□□ 0.16
ERCC1-201ENST00000013807 PDE1CQ14123 709 aaPredicted RBP16.08■□□□□ 0.16
ERCC1-201ENST00000013807 PTK2BQ14289 1009 aa16.08■□□□□ 0.16
ERCC1-201ENST00000013807 AGERQ15109 404 aa16.08■□□□□ 0.16
ERCC1-201ENST00000013807 TBC1D25Q3MII6 688 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms