RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Ptger1P35375 405 aa11.5□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Gdf7P43029 461 aa11.5□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Hsdl2Q2TPA8 490 aaKnown RBP11.5□□□□□ -0.57
Ddx55-201ENSMUST00000071057 H2-M3Q31093 336 aa11.5□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Cbx5Q61686 191 aaKnown RBP11.5□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Xlr3cQ61806 226 aa11.5□□□□□ -0.57
Ddx55-201ENSMUST00000071057 ItpkcQ7TS72 678 aa11.5□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Fzd10Q8BKG4 582 aa11.5□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Ccdc68Q8BVC4 333 aa11.5□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Smim14Q91VT8 99 aa11.5□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Akirin1Q99LF1 191 aa11.5□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Ddit4Q9D3F7 229 aa11.5□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Snx5Q9D8U8 404 aa11.5□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Oxct2bQ9ESL0 520 aa11.5□□□□□ -0.57
Ddx55-201ENSMUST00000071057 AuhQ9JLZ3 314 aa11.5□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Ror1Q9Z139 937 aa11.5□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Dock3Q8CIQ7 2027 aa11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Dnah12Q3V0Q1 3086 aa11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Serpinb3cA2RSF9 386 aa11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Gm3002E9PW72 216 aa11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Gm21293E9Q4G9 266 aa11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Grip2G3XA20 1042 aa11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Slc6a13P31649 602 aa11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Aldh2P47738 519 aaKnown RBP11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Cyp2c38P56655 490 aa11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Tubgcp3P58854 905 aa11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Itga11P61622 1188 aa11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Fam47cQ14BE7 430 aa11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Fbxw11Q5SRY7 542 aaKnown RBP11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Nab1Q61122 486 aa11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 SnrpaQ62189 287 aaKnown RBP11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Q80Y73 168 aa11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Best2Q8BGM5 508 aa11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Znf276Q8CE64 614 aa11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Zbtb6Q8K088 423 aa11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 NcaldQ91X97 193 aa11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Rxfp2Q91ZZ5 737 aa11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Adrm1Q9JKV1 407 aa11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Stap1Q9JM90 297 aaKnown RBP11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Sept6Q9R1T4 434 aa11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 1700001O22RikA2APZ1 375 aa11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Prpmp5E9PXN1 296 aa11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Gm21897J3KMP5 500 aa11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 PolP11369 1281 aa11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Wnt3aP27467 352 aa11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Apobec1P51908 229 aaKnown RBP11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Gm136Q3V037 328 aa11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 1810049J17RikQ3V2G9 153 aa11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 EgflamQ4VBE4 1017 aa11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Cntn2Q61330 1040 aa11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Msi1Q61474 362 aaKnown RBP11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Adam39Q7M762 756 aa11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Hsfy2Q80Y37 392 aa11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Znf879Q8BI99 563 aa11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Abraxas1Q8BPZ8 407 aa11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Clec1aQ8BWY2 269 aa11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Dclre1bQ8C7W7 541 aa11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Fbxw7Q8VBV4 629 aa11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Lnx2Q91XL2 687 aa11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Ndufa5Q9CPP6 116 aa11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Tm9sf1Q9DBU0 606 aa11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Homer2Q9QWW1 354 aa11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Dock1Q8BUR4 1865 aa11.49□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Trim12cD3Z3L3 497 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 GmlE9PX31 176 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Vmn2r11E9Q4X4 861 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Vmn2r19G5E8G4 854 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Eef1bO70251 225 aaKnown RBP11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Akap10O88845 662 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Cd4P06332 457 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Icam1P13597 537 aaKnown RBP11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Zfy2P20662 777 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Lzts1P60853 599 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Coq7P97478 217 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Gpsm3Q3U1Z5 159 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Mif4gdQ3UBZ5 222 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Atxn7l3bQ3UD01 97 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 UrgcpQ5NCI0 926 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Exoc3l1Q8BI71 739 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 GaleQ8R059 347 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Stk33Q924X7 491 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Ophn1Q99J31 802 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Abcg3Q99P81 650 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Setd6Q9CWY3 473 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Ssu72Q9CY97 194 aaKnown RBP11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Arl2Q9D0J4 184 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Dkk3Q9QUN9 349 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Rgs2O08849 211 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 RxraP28700 467 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Gp1bbP56400 206 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Acot8P58137 320 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Adamts19P59509 1210 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Polr2gP62488 172 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Stxbp5lQ5DQR4 1185 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Sema4aQ62178 760 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 DgkqQ6P5E8 934 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Fam117aQ7TNF9 451 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Stk38lQ7TSE6 464 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Klhl29Q80T74 875 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Rpp38Q80UU2 280 aa11.48□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 46.7 ms