RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 OR2A12Q8NGT7 310 aa12.49□□□□□ -0.41
LINC00339-213ENST00000642137 RPLP0P6Q8NHW5 317 aa12.49□□□□□ -0.41
LINC00339-213ENST00000642137 ARRDC2Q8TBH0 407 aa12.49□□□□□ -0.41
LINC00339-213ENST00000642137 CCHCR1Q8TD31 782 aa12.49□□□□□ -0.41
LINC00339-213ENST00000642137 ZNF419Q96HQ0 510 aaPredicted RBP12.49□□□□□ -0.41
LINC00339-213ENST00000642137 LRIG1Q96JA1 1093 aa12.49□□□□□ -0.41
LINC00339-213ENST00000642137 GDAP1L1Q96MZ0 367 aa12.49□□□□□ -0.41
LINC00339-213ENST00000642137 PPP1R2P1Q96PQ5 205 aa12.49□□□□□ -0.41
LINC00339-213ENST00000642137 HEPHQ9BQS7 1158 aa12.49□□□□□ -0.41
LINC00339-213ENST00000642137 CEP41Q9BYV8 373 aa12.49□□□□□ -0.41
LINC00339-213ENST00000642137 FOXQ1Q9C009 403 aa12.49□□□□□ -0.41
LINC00339-213ENST00000642137 PCDH9Q9HC56 1237 aa12.49□□□□□ -0.41
LINC00339-213ENST00000642137 CACNA2D2Q9NY47 1150 aa12.49□□□□□ -0.41
LINC00339-213ENST00000642137 SIT1Q9Y3P8 196 aa12.49□□□□□ -0.41
LINC00339-213ENST00000642137 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.48□□□□□ -0.41
LINC00339-213ENST00000642137 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.48□□□□□ -0.41
LINC00339-213ENST00000642137 ALOX15BO15296 676 aa12.48□□□□□ -0.41
LINC00339-213ENST00000642137 INSIG1O15503 277 aa12.48□□□□□ -0.41
LINC00339-213ENST00000642137 PSMD3O43242 534 aa12.48□□□□□ -0.41
LINC00339-213ENST00000642137 SYNCRIPO60506 623 aaKnown RBP12.48□□□□□ -0.41
LINC00339-213ENST00000642137 ADAM23O75077 832 aa12.48□□□□□ -0.41
LINC00339-213ENST00000642137 ZSCAN5DPP0CG00 497 aa12.48□□□□□ -0.41
LINC00339-213ENST00000642137 PRKCHP24723 683 aa12.48□□□□□ -0.41
LINC00339-213ENST00000642137 MAGEA9P43362 315 aa12.48□□□□□ -0.41
LINC00339-213ENST00000642137 MAPK8P45983 427 aa12.48□□□□□ -0.41
LINC00339-213ENST00000642137 RGRP47804 291 aa12.48□□□□□ -0.41
LINC00339-213ENST00000642137 MAXP61244 160 aa12.48□□□□□ -0.41
LINC00339-213ENST00000642137 AP1S1P61966 158 aa12.48□□□□□ -0.41
LINC00339-213ENST00000642137 TUBB4BP68371 445 aa12.48□□□□□ -0.41
LINC00339-213ENST00000642137 NIPAL4Q0D2K0 466 aa12.48□□□□□ -0.41
LINC00339-213ENST00000642137 CAMK2GQ13555 558 aaPredicted RBP12.48□□□□□ -0.41
LINC00339-213ENST00000642137 PTK6Q13882 451 aa12.48□□□□□ -0.41
LINC00339-213ENST00000642137 PRPSAP1Q14558 356 aa12.48□□□□□ -0.41
LINC00339-213ENST00000642137 PPP1R7Q15435 360 aa12.48□□□□□ -0.41
LINC00339-213ENST00000642137 SLC14A2Q15849 920 aa12.48□□□□□ -0.41
LINC00339-213ENST00000642137 NCEH1Q6PIU2 408 aa12.48□□□□□ -0.41
LINC00339-213ENST00000642137 DPY19L3Q6ZPD9 716 aa12.48□□□□□ -0.41
LINC00339-213ENST00000642137 Q6ZVU0 165 aa12.48□□□□□ -0.41
LINC00339-213ENST00000642137 PRUNE1Q86TP1 453 aa12.48□□□□□ -0.41
LINC00339-213ENST00000642137 JAMLQ86YT9 394 aa12.48□□□□□ -0.41
LINC00339-213ENST00000642137 TMIEQ8NEW7 156 aa12.48□□□□□ -0.41
LINC00339-213ENST00000642137 TADA1Q96BN2 335 aa12.48□□□□□ -0.41
LINC00339-213ENST00000642137 IMP4Q96G21 291 aaKnown RBP12.48□□□□□ -0.41
LINC00339-213ENST00000642137 TUBGCP5Q96RT8 1024 aa12.48□□□□□ -0.41
LINC00339-213ENST00000642137 FAM129BQ96TA1 746 aa12.48□□□□□ -0.41
LINC00339-213ENST00000642137 SEMA3CQ99985 751 aa12.48□□□□□ -0.41
LINC00339-213ENST00000642137 TM6SF2Q9BZW4 377 aa12.48□□□□□ -0.41
LINC00339-213ENST00000642137 GBA3Q9H227 469 aa12.48□□□□□ -0.41
LINC00339-213ENST00000642137 TNKS2Q9H2K2 1166 aa12.48□□□□□ -0.41
LINC00339-213ENST00000642137 MFSD1Q9H3U5 465 aa12.48□□□□□ -0.41
LINC00339-213ENST00000642137 ZDHHC4Q9NPG8 344 aa12.48□□□□□ -0.41
LINC00339-213ENST00000642137 SCUBE2Q9NQ36 999 aa12.48□□□□□ -0.41
LINC00339-213ENST00000642137 PRSS16Q9NQE7 514 aa12.48□□□□□ -0.41
LINC00339-213ENST00000642137 RRAGDQ9NQL2 400 aaPredicted RBP12.48□□□□□ -0.41
LINC00339-213ENST00000642137 RSPH14Q9UHP6 348 aa12.48□□□□□ -0.41
LINC00339-213ENST00000642137 EVLQ9UI08 416 aaPredicted RBP12.48□□□□□ -0.41
LINC00339-213ENST00000642137 MMP17Q9ULZ9 603 aa12.48□□□□□ -0.41
LINC00339-213ENST00000642137 AAR2Q9Y312 384 aaKnown RBP12.48□□□□□ -0.41
LINC00339-213ENST00000642137 TTI1O43156 1089 aa12.47□□□□□ -0.41
LINC00339-213ENST00000642137 RAD51CO43502 376 aa12.47□□□□□ -0.41
LINC00339-213ENST00000642137 SIN3BO75182 1162 aa12.47□□□□□ -0.41
LINC00339-213ENST00000642137 ANXA9O76027 345 aa12.47□□□□□ -0.41
LINC00339-213ENST00000642137 SLU7O95391 586 aaKnown RBP12.47□□□□□ -0.41
LINC00339-213ENST00000642137 METTL18O95568 372 aa12.47□□□□□ -0.41
LINC00339-213ENST00000642137 SERPINF2P08697 491 aa12.47□□□□□ -0.41
LINC00339-213ENST00000642137 C7P10643 843 aa12.47□□□□□ -0.41
LINC00339-213ENST00000642137 NFKB1P19838 968 aa12.47□□□□□ -0.41
LINC00339-213ENST00000642137 WASP42768 502 aa12.47□□□□□ -0.41
LINC00339-213ENST00000642137 CCNHP51946 323 aaPredicted RBP12.47□□□□□ -0.41
LINC00339-213ENST00000642137 DSC2Q02487 901 aa12.47□□□□□ -0.41
LINC00339-213ENST00000642137 MPP3Q13368 585 aa12.47□□□□□ -0.41
LINC00339-213ENST00000642137 STARD3Q14849 445 aa12.47□□□□□ -0.41
LINC00339-213ENST00000642137 TRIP13Q15645 432 aaPredicted RBP12.47□□□□□ -0.41
LINC00339-213ENST00000642137 FAM182AQ5T1J6 154 aa12.47□□□□□ -0.41
LINC00339-213ENST00000642137 ATXN7L2Q5T6C5 722 aaPredicted RBP12.47□□□□□ -0.41
LINC00339-213ENST00000642137 MAMSTRQ6ZN01 415 aa12.47□□□□□ -0.41
LINC00339-213ENST00000642137 SYT13Q7L8C5 426 aa12.47□□□□□ -0.41
LINC00339-213ENST00000642137 PRPF39Q86UA1 669 aaKnown RBP12.47□□□□□ -0.41
LINC00339-213ENST00000642137 KLHDC8BQ8IXV7 354 aa12.47□□□□□ -0.41
LINC00339-213ENST00000642137 ZNF366Q8N895 744 aa12.47□□□□□ -0.41
LINC00339-213ENST00000642137 HCAR2Q8TDS4 363 aa12.47□□□□□ -0.41
LINC00339-213ENST00000642137 OR8D1Q8WZ84 308 aa12.47□□□□□ -0.41
LINC00339-213ENST00000642137 LRRC45Q96CN5 670 aa12.47□□□□□ -0.41
LINC00339-213ENST00000642137 EXOC2Q96KP1 924 aa12.47□□□□□ -0.41
LINC00339-213ENST00000642137 IER2Q9BTL4 223 aa12.47□□□□□ -0.41
LINC00339-213ENST00000642137 LRRC1Q9BTT6 524 aa12.47□□□□□ -0.41
LINC00339-213ENST00000642137 CHRDQ9H2X0 955 aa12.47□□□□□ -0.41
LINC00339-213ENST00000642137 MTG2Q9H4K7 406 aa12.47□□□□□ -0.41
LINC00339-213ENST00000642137 FBRSQ9HAH7 460 aa12.47□□□□□ -0.41
LINC00339-213ENST00000642137 ETNK1Q9HBU6 452 aa12.47□□□□□ -0.41
LINC00339-213ENST00000642137 NOD2Q9HC29 1040 aa12.47□□□□□ -0.41
LINC00339-213ENST00000642137 VPS45Q9NRW7 570 aa12.47□□□□□ -0.41
LINC00339-213ENST00000642137 FAM153AQ9UHL3 310 aa12.47□□□□□ -0.41
LINC00339-213ENST00000642137 TTLL3Q9Y4R7 772 aa12.47□□□□□ -0.41
LINC00339-213ENST00000642137 CKAP5Q14008 2032 aa12.47□□□□□ -0.41
LINC00339-213ENST00000642137 A0A1W2PQF6 199 aa12.46□□□□□ -0.41
LINC00339-213ENST00000642137 TTC24A2A3L6 582 aaPredicted RBP12.46□□□□□ -0.41
LINC00339-213ENST00000642137 GOLGA6CA6NDK9 693 aa12.46□□□□□ -0.41
LINC00339-213ENST00000642137 GOLGA6BA6NDN3 693 aa12.46□□□□□ -0.41
LINC00339-213ENST00000642137 TMEM221A6NGB7 291 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms