RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 AFMIDQ63HM1 303 aa15.3■□□□□ 0.04
TRIM3-215ENST00000639856 NADSYN1Q6IA69 706 aa15.3■□□□□ 0.04
TRIM3-215ENST00000639856 TIGD7Q6NT04 549 aaPredicted RBP15.3■□□□□ 0.04
TRIM3-215ENST00000639856 FBXL22Q6P050 247 aa15.3■□□□□ 0.04
TRIM3-215ENST00000639856 CIR1Q86X95 450 aaPredicted RBP15.3■□□□□ 0.04
TRIM3-215ENST00000639856 C10orf107Q8IVU9 208 aa15.3■□□□□ 0.04
TRIM3-215ENST00000639856 ATP6V0D2Q8N8Y2 350 aa15.3■□□□□ 0.04
TRIM3-215ENST00000639856 BTN2A3PQ96KV6 586 aa15.3■□□□□ 0.04
TRIM3-215ENST00000639856 ALPK3Q96L96 1907 aa15.3■□□□□ 0.04
TRIM3-215ENST00000639856 ZNF778Q96MU6 729 aa15.3■□□□□ 0.04
TRIM3-215ENST00000639856 TBL1YQ9BQ87 522 aa15.3■□□□□ 0.04
TRIM3-215ENST00000639856 EBF2Q9HAK2 575 aa15.3■□□□□ 0.04
TRIM3-215ENST00000639856 IL23AQ9NPF7 189 aa15.3■□□□□ 0.04
TRIM3-215ENST00000639856 ARMCX1Q9P291 453 aa15.3■□□□□ 0.04
TRIM3-215ENST00000639856 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.3■□□□□ 0.04
TRIM3-215ENST00000639856 ZNF840PA6NDX5 716 aa15.29■□□□□ 0.04
TRIM3-215ENST00000639856 BAIAP3O94812 1187 aa15.29■□□□□ 0.04
TRIM3-215ENST00000639856 GMPRP36959 345 aa15.29■□□□□ 0.04
TRIM3-215ENST00000639856 PDPK2PQ6A1A2 396 aa15.29■□□□□ 0.04
TRIM3-215ENST00000639856 LRRC49Q8IUZ0 686 aa15.29■□□□□ 0.04
TRIM3-215ENST00000639856 PPP1R2P1Q96PQ5 205 aa15.29■□□□□ 0.04
TRIM3-215ENST00000639856 CADM1Q9BY67 442 aaKnown RBP15.29■□□□□ 0.04
TRIM3-215ENST00000639856 IARS2Q9NSE4 1012 aaKnown RBP15.29■□□□□ 0.04
TRIM3-215ENST00000639856 ZNF358Q9NW07 568 aa15.29■□□□□ 0.04
TRIM3-215ENST00000639856 NSMCE4AQ9NXX6 385 aa15.29■□□□□ 0.04
TRIM3-215ENST00000639856 PPARGC1AQ9UBK2 798 aaKnown RBP15.29■□□□□ 0.04
TRIM3-215ENST00000639856 MYLKQ15746 1914 aa15.29■□□□□ 0.04
TRIM3-215ENST00000639856 ANAPC1Q9H1A4 1944 aa15.29■□□□□ 0.04
TRIM3-215ENST00000639856 A0A096LPK6 155 aa15.29■□□□□ 0.04
TRIM3-215ENST00000639856 CAPN14A8MX76 684 aa15.29■□□□□ 0.04
TRIM3-215ENST00000639856 GYG2O15488 501 aa15.29■□□□□ 0.04
TRIM3-215ENST00000639856 LYPLA1O75608 230 aaPredicted RBP15.29■□□□□ 0.04
TRIM3-215ENST00000639856 CPA3P15088 417 aa15.29■□□□□ 0.04
TRIM3-215ENST00000639856 PLD1Q13393 1074 aa15.29■□□□□ 0.04
TRIM3-215ENST00000639856 PCID2Q5JVF3 399 aa15.29■□□□□ 0.04
TRIM3-215ENST00000639856 WASHC2DQ5SRD0 308 aa15.29■□□□□ 0.04
TRIM3-215ENST00000639856 TPGS2Q68CL5 300 aa15.29■□□□□ 0.04
TRIM3-215ENST00000639856 CLEC14AQ86T13 490 aa15.29■□□□□ 0.04
TRIM3-215ENST00000639856 CCDC117Q8IWD4 279 aaPredicted RBP15.29■□□□□ 0.04
TRIM3-215ENST00000639856 PLD6Q8N2A8 252 aaKnown RBP15.29■□□□□ 0.04
TRIM3-215ENST00000639856 VPS39Q96JC1 886 aa15.29■□□□□ 0.04
TRIM3-215ENST00000639856 STN1Q9H668 368 aaKnown RBP15.29■□□□□ 0.04
TRIM3-215ENST00000639856 CXXC1Q9P0U4 656 aaPredicted RBP15.29■□□□□ 0.04
TRIM3-215ENST00000639856 DNAJC16Q9Y2G8 782 aa15.29■□□□□ 0.04
TRIM3-215ENST00000639856 E2F8A0AVK6 867 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 WASH4PA8MWX3 477 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 PRRG1O14668 218 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 GSC2O15499 205 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 C2P06681 752 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 F7P08709 466 aaPredicted RBP15.28■□□□□ 0.04
TRIM3-215ENST00000639856 LINC00271P0C7V0 271 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 SPATA31D3P0C874 917 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 RALBP11234 206 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 HADHAP40939 763 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 PAPOLAP51003 745 aaKnown RBP15.28■□□□□ 0.04
TRIM3-215ENST00000639856 GEMP55040 296 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 RAB33AQ14088 237 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 DENND5AQ6IQ26 1287 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 PKN3Q6P5Z2 889 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 SPATA31D4Q6ZUB0 917 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 IPMKQ8NFU5 416 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 BADQ92934 168 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 RILPQ96NA2 401 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 EBF4Q9BQW3 602 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 ZYG11BQ9C0D3 744 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 CAB39LQ9H9S4 337 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 ENTPD7Q9NQZ7 604 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 TAS2R1Q9NYW7 299 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 NOP53Q9NZM5 478 aaKnown RBP15.28■□□□□ 0.04
TRIM3-215ENST00000639856 FNIP2Q9P278 1114 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 IGLV3-10A0A075B6K4 115 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 GOLGA8TH3BQL2 631 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 TEX28O15482 410 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 COCHO43405 550 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 ANP32DO95626 131 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 HLA-DQB2P05538 268 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 SERPINA6P08185 405 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 EN2P19622 333 aaPredicted RBP15.28■□□□□ 0.04
TRIM3-215ENST00000639856 CA8P35219 290 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 ATP5C1P36542 298 aaKnown RBP15.28■□□□□ 0.04
TRIM3-215ENST00000639856 ABCG1P45844 678 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 ALDH1A3P47895 512 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 NUMBP49757 651 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 RING1Q06587 406 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 TWF1Q12792 350 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 DLG2Q15700 870 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 RINLQ6ZS11 566 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 OR6Y1Q8NGX8 325 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 PPP4R1Q8TF05 950 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 CEP295NLQ96MC4 621 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 SORT1Q99523 831 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 GPR22Q99680 433 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 FICDQ9BVA6 458 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 NACA2Q9H009 215 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 RBM22Q9NW64 420 aaKnown RBP eCLIP15.28■□□□□ 0.04
TRIM3-215ENST00000639856 DNMT3LQ9UJW3 386 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 PLXNA4Q9HCM2 1894 aa15.28■□□□□ 0.04
TRIM3-215ENST00000639856 CCDC78A2IDD5 438 aa15.27■□□□□ 0.04
TRIM3-215ENST00000639856 C2orf78A6NCI8 922 aa15.27■□□□□ 0.04
TRIM3-215ENST00000639856 PEX11AO75192 247 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms