RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 RAD51BO15315 384 aa18.78■□□□□ 0.6
CLN6-220ENST00000637450 FFAR2O15552 330 aa18.78■□□□□ 0.6
CLN6-220ENST00000637450 TLX3O43711 291 aaPredicted RBP18.78■□□□□ 0.6
CLN6-220ENST00000637450 LRIG2O94898 1065 aa18.78■□□□□ 0.6
CLN6-220ENST00000637450 KRT3P12035 628 aa18.78■□□□□ 0.6
CLN6-220ENST00000637450 CKMT1AP12532 417 aa18.78■□□□□ 0.6
CLN6-220ENST00000637450 GKP32189 559 aa18.78■□□□□ 0.6
CLN6-220ENST00000637450 EIF2S3P41091 472 aaKnown RBP18.78■□□□□ 0.6
CLN6-220ENST00000637450 STAT1P42224 750 aa18.78■□□□□ 0.6
CLN6-220ENST00000637450 HDAC4P56524 1084 aa18.78■□□□□ 0.6
CLN6-220ENST00000637450 GSCP56915 257 aaPredicted RBP18.78■□□□□ 0.6
CLN6-220ENST00000637450 GEMIN4P57678 1058 aaKnown RBP18.78■□□□□ 0.6
CLN6-220ENST00000637450 DAB2P98082 770 aa18.78■□□□□ 0.6
CLN6-220ENST00000637450 FKBP15Q5T1M5 1219 aa18.78■□□□□ 0.6
CLN6-220ENST00000637450 KYAT3Q6YP21 454 aaKnown RBP18.78■□□□□ 0.6
CLN6-220ENST00000637450 CLEC17AQ6ZS10 378 aa18.78■□□□□ 0.6
CLN6-220ENST00000637450 PTAR1Q7Z6K3 402 aaPredicted RBP18.78■□□□□ 0.6
CLN6-220ENST00000637450 CCDC185Q8N715 623 aa18.78■□□□□ 0.6
CLN6-220ENST00000637450 FAM172AQ8WUF8 416 aa18.78■□□□□ 0.6
CLN6-220ENST00000637450 VOPP1Q96AW1 172 aa18.78■□□□□ 0.6
CLN6-220ENST00000637450 TBC1D31Q96DN5 1066 aa18.78■□□□□ 0.6
CLN6-220ENST00000637450 DCBLD2Q96PD2 775 aa18.78■□□□□ 0.6
CLN6-220ENST00000637450 LENG8Q96PV6 779 aaPredicted RBP18.78■□□□□ 0.6
CLN6-220ENST00000637450 C1QTNF2Q9BXJ5 285 aa18.78■□□□□ 0.6
CLN6-220ENST00000637450 FANCLQ9NW38 375 aa18.78■□□□□ 0.6
CLN6-220ENST00000637450 NLGN3Q9NZ94 848 aa18.78■□□□□ 0.6
CLN6-220ENST00000637450 SIK3Q9Y2K2 1263 aa18.78■□□□□ 0.6
CLN6-220ENST00000637450 DOCK4Q8N1I0 1966 aa18.78■□□□□ 0.6
CLN6-220ENST00000637450 SPTY2D1-AS1A0A0U1RR47 76 aa18.77■□□□□ 0.6
CLN6-220ENST00000637450 NEMP2A6NFY4 417 aa18.77■□□□□ 0.6
CLN6-220ENST00000637450 SCAMP1O15126 338 aa18.77■□□□□ 0.6
CLN6-220ENST00000637450 TSPAN6O43657 245 aa18.77■□□□□ 0.6
CLN6-220ENST00000637450 GSRP00390 522 aa18.77■□□□□ 0.6
CLN6-220ENST00000637450 MT-CO3P00414 261 aa18.77■□□□□ 0.6
CLN6-220ENST00000637450 TPM2P07951 284 aa18.77■□□□□ 0.6
CLN6-220ENST00000637450 ALPPL2P10696 532 aa18.77■□□□□ 0.6
CLN6-220ENST00000637450 RFC1P35251 1148 aaPredicted RBP18.77■□□□□ 0.6
CLN6-220ENST00000637450 HNRNPKP61978 463 aaKnown RBP eCLIP18.77■□□□□ 0.6
CLN6-220ENST00000637450 SGCGQ13326 291 aa18.77■□□□□ 0.6
CLN6-220ENST00000637450 FZD2Q14332 565 aa18.77■□□□□ 0.6
CLN6-220ENST00000637450 MYLK3Q32MK0 819 aa18.77■□□□□ 0.6
CLN6-220ENST00000637450 ZNF805Q5CZA5 627 aa18.77■□□□□ 0.6
CLN6-220ENST00000637450 ZNF542PQ5EBM4 170 aa18.77■□□□□ 0.6
CLN6-220ENST00000637450 TMC6Q7Z403 805 aa18.77■□□□□ 0.6
CLN6-220ENST00000637450 RYBPQ8N488 228 aaPredicted RBP18.77■□□□□ 0.6
CLN6-220ENST00000637450 OR2AP1Q8NGE2 309 aa18.77■□□□□ 0.6
CLN6-220ENST00000637450 NTAN1Q96AB6 310 aa18.77■□□□□ 0.6
CLN6-220ENST00000637450 RAB7BQ96AH8 199 aa18.77■□□□□ 0.6
CLN6-220ENST00000637450 CRELD1Q96HD1 420 aa18.77■□□□□ 0.6
CLN6-220ENST00000637450 KLF6Q99612 283 aaPredicted RBP18.77■□□□□ 0.6
CLN6-220ENST00000637450 DNAJC28Q9NX36 388 aa18.77■□□□□ 0.6
CLN6-220ENST00000637450 ADAM22Q9P0K1 906 aa18.77■□□□□ 0.6
CLN6-220ENST00000637450 HPCAL4Q9UM19 191 aa18.77■□□□□ 0.6
CLN6-220ENST00000637450 IGLON5A6NGN9 336 aa18.76■□□□□ 0.59
CLN6-220ENST00000637450 KDELR3O43731 214 aa18.76■□□□□ 0.59
CLN6-220ENST00000637450 RAMP2O60895 175 aa18.76■□□□□ 0.59
CLN6-220ENST00000637450 POP4O95707 220 aaKnown RBP18.76■□□□□ 0.59
CLN6-220ENST00000637450 CSF2P04141 144 aa18.76■□□□□ 0.59
CLN6-220ENST00000637450 ABL2P42684 1182 aa18.76■□□□□ 0.59
CLN6-220ENST00000637450 ABCG1P45844 678 aa18.76■□□□□ 0.59
CLN6-220ENST00000637450 NSFP46459 744 aaKnown RBP18.76■□□□□ 0.59
CLN6-220ENST00000637450 RABIFP47224 123 aa18.76■□□□□ 0.59
CLN6-220ENST00000637450 SNRPD1P62314 119 aaKnown RBP18.76■□□□□ 0.59
CLN6-220ENST00000637450 ACAP1Q15027 740 aa18.76■□□□□ 0.59
CLN6-220ENST00000637450 POLD3Q15054 466 aaPredicted RBP18.76■□□□□ 0.59
CLN6-220ENST00000637450 CLEC16AQ2KHT3 1053 aa18.76■□□□□ 0.59
CLN6-220ENST00000637450 WDR59Q6PJI9 974 aa18.76■□□□□ 0.59
CLN6-220ENST00000637450 LEKR1Q6ZMV7 388 aa18.76■□□□□ 0.59
CLN6-220ENST00000637450 PHF13Q86YI8 300 aaPredicted RBP18.76■□□□□ 0.59
CLN6-220ENST00000637450 FAM181AQ8N9Y4 354 aa18.76■□□□□ 0.59
CLN6-220ENST00000637450 OR6K2Q8NGY2 324 aa18.76■□□□□ 0.59
CLN6-220ENST00000637450 ASB12Q8WXK4 309 aa18.76■□□□□ 0.59
CLN6-220ENST00000637450 APOLD1Q96LR9 279 aa18.76■□□□□ 0.59
CLN6-220ENST00000637450 BBC3Q96PG8 261 aaPredicted RBP18.76■□□□□ 0.59
CLN6-220ENST00000637450 LY6G6EA0A0G2JKS1 128 aa18.75■□□□□ 0.59
CLN6-220ENST00000637450 SIGLEC16A6NMB1 481 aa18.75■□□□□ 0.59
CLN6-220ENST00000637450 K7ESM1 405 aa18.75■□□□□ 0.59
CLN6-220ENST00000637450 KRIT1O00522 736 aa18.75■□□□□ 0.59
CLN6-220ENST00000637450 FPGTO14772 594 aa18.75■□□□□ 0.59
CLN6-220ENST00000637450 NME1P15531 152 aaKnown RBP18.75■□□□□ 0.59
CLN6-220ENST00000637450 ITPKBP27987 946 aa18.75■□□□□ 0.59
CLN6-220ENST00000637450 COPB1P53618 953 aaKnown RBP18.75■□□□□ 0.59
CLN6-220ENST00000637450 SYCP1Q15431 976 aa18.75■□□□□ 0.59
CLN6-220ENST00000637450 CDCP2Q5VXM1 449 aa18.75■□□□□ 0.59
CLN6-220ENST00000637450 KDM7AQ6ZMT4 941 aa18.75■□□□□ 0.59
CLN6-220ENST00000637450 RBM43Q6ZSC3 357 aaKnown RBP18.75■□□□□ 0.59
CLN6-220ENST00000637450 SLFN11Q7Z7L1 901 aa18.75■□□□□ 0.59
CLN6-220ENST00000637450 C3orf20Q8ND61 904 aa18.75■□□□□ 0.59
CLN6-220ENST00000637450 FGF11Q92914 225 aa18.75■□□□□ 0.59
CLN6-220ENST00000637450 DUSP23Q9BVJ7 150 aa18.75■□□□□ 0.59
CLN6-220ENST00000637450 SELENOOQ9BVL4 669 aa18.75■□□□□ 0.59
CLN6-220ENST00000637450 USP29Q9HBJ7 922 aa18.75■□□□□ 0.59
CLN6-220ENST00000637450 GGT7Q9UJ14 662 aa18.75■□□□□ 0.59
CLN6-220ENST00000637450 U3KQA8 63 aa18.75■□□□□ 0.59
CLN6-220ENST00000637450 TRPM6Q9BX84 2022 aa18.74■□□□□ 0.59
CLN6-220ENST00000637450 ZSCAN5CA6NGD5 496 aaPredicted RBP18.74■□□□□ 0.59
CLN6-220ENST00000637450 LRRC10BA6NIK2 292 aa18.74■□□□□ 0.59
CLN6-220ENST00000637450 NEMP1O14524 444 aa18.74■□□□□ 0.59
CLN6-220ENST00000637450 SPINT1O43278 529 aa18.74■□□□□ 0.59
CLN6-220ENST00000637450 OPA1O60313 960 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms