RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 P3H1Q32P28 736 aa20.13■□□□□ 0.81
PDLIM2-221ENST00000622702 HNRNPA1L2Q32P51 320 aaKnown RBP20.13■□□□□ 0.81
PDLIM2-221ENST00000622702 ALG1LQ6GMV1 187 aa20.13■□□□□ 0.81
PDLIM2-221ENST00000622702 SYT13Q7L8C5 426 aa20.13■□□□□ 0.81
PDLIM2-221ENST00000622702 TRMT11Q7Z4G4 463 aaKnown RBP20.13■□□□□ 0.81
PDLIM2-221ENST00000622702 CHPFQ8IZ52 775 aa20.13■□□□□ 0.81
PDLIM2-221ENST00000622702 PGBD5Q8N414 524 aa20.13■□□□□ 0.81
PDLIM2-221ENST00000622702 TXNDC5Q8NBS9 432 aaKnown RBP20.13■□□□□ 0.81
PDLIM2-221ENST00000622702 ACOX2Q99424 681 aa20.13■□□□□ 0.81
PDLIM2-221ENST00000622702 KRT12Q99456 494 aa20.13■□□□□ 0.81
PDLIM2-221ENST00000622702 CARD6Q9BX69 1037 aa20.13■□□□□ 0.81
PDLIM2-221ENST00000622702 CEP41Q9BYV8 373 aa20.13■□□□□ 0.81
PDLIM2-221ENST00000622702 CACNA2D2Q9NY47 1150 aa20.13■□□□□ 0.81
PDLIM2-221ENST00000622702 STON1Q9Y6Q2 735 aa20.13■□□□□ 0.81
PDLIM2-221ENST00000622702 MUSKO15146 869 aa20.12■□□□□ 0.81
PDLIM2-221ENST00000622702 ECEL1O95672 775 aa20.12■□□□□ 0.81
PDLIM2-221ENST00000622702 GAS8O95995 478 aa20.12■□□□□ 0.81
PDLIM2-221ENST00000622702 GSRP00390 522 aa20.12■□□□□ 0.81
PDLIM2-221ENST00000622702 HLA-DQB2P05538 268 aa20.12■□□□□ 0.81
PDLIM2-221ENST00000622702 NTSR1P30989 418 aa20.12■□□□□ 0.81
PDLIM2-221ENST00000622702 DHX34Q14147 1143 aaKnown RBP20.12■□□□□ 0.81
PDLIM2-221ENST00000622702 ACCSLQ4AC99 568 aa20.12■□□□□ 0.81
PDLIM2-221ENST00000622702 ANKRD20A2Q5SQ80 823 aa20.12■□□□□ 0.81
PDLIM2-221ENST00000622702 ANKRD20A1Q5TYW2 823 aa20.12■□□□□ 0.81
PDLIM2-221ENST00000622702 ANKRD20A3Q5VUR7 823 aa20.12■□□□□ 0.81
PDLIM2-221ENST00000622702 GSTA5Q7RTV2 222 aa20.12■□□□□ 0.81
PDLIM2-221ENST00000622702 CCDC89Q8N998 374 aa20.12■□□□□ 0.81
PDLIM2-221ENST00000622702 AGAP3Q96P47 875 aa20.12■□□□□ 0.81
PDLIM2-221ENST00000622702 POLR1EQ9GZS1 481 aaKnown RBP20.12■□□□□ 0.81
PDLIM2-221ENST00000622702 NT5MQ9NPB1 228 aa20.12■□□□□ 0.81
PDLIM2-221ENST00000622702 KLHL8Q9P2G9 620 aaPredicted RBP20.12■□□□□ 0.81
PDLIM2-221ENST00000622702 MMP17Q9ULZ9 603 aa20.12■□□□□ 0.81
PDLIM2-221ENST00000622702 NEU2Q9Y3R4 380 aa20.12■□□□□ 0.81
PDLIM2-221ENST00000622702 ZBTB24O43167 697 aaPredicted RBP20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 PAPSS2O95340 614 aaPredicted RBP20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 IFNB1P01574 187 aa20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 CR2P20023 1033 aa20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 PRKCHP24723 683 aa20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 CD68P34810 354 aaPredicted RBP20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 PTGIRP43119 386 aa20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 CSNK1DP48730 415 aa20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 SNRPD1P62314 119 aaKnown RBP20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 Q6ZVU0 165 aa20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 PID1Q7Z2X4 250 aa20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 OR2AP1Q8NGE2 309 aa20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 CCDC110Q8TBZ0 833 aa20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 ATOH1Q92858 354 aaPredicted RBP20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 PTPRN2Q92932 1015 aa20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 GABRG3Q99928 467 aa20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 IRF2BPLQ9H1B7 796 aa20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 PCDH9Q9HC56 1237 aa20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 SUN2Q9UH99 717 aa20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 ARIH1Q9Y4X5 557 aaPredicted RBP20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 VPS13AQ96RL7 3174 aa20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 EDDM13A0A1B0GTR0 161 aa20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 TARSL2A2RTX5 802 aaKnown RBP20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 WASH3PC4AMC7 463 aa20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 K7ESF4 209 aa20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 HLA-EP13747 358 aa20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 WASP42768 502 aa20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 RGRP47804 291 aa20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 DR1Q01658 176 aa20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 ZNF528Q3MIS6 628 aa20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 CARD16Q5EG05 197 aa20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 RALGPS1Q5JS13 557 aa20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 EOGTQ5NDL2 527 aa20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 ITPRIPL1Q6GPH6 555 aa20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 SDE2Q6IQ49 451 aa20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 C4orf22Q6V702 233 aa20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 SYDE1Q6ZW31 735 aaPredicted RBP20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 MMGT1Q8N4V1 131 aa20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 GLIS1Q8NBF1 620 aa20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 GDAP1L1Q96MZ0 367 aa20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 TM6SF2Q9BZW4 377 aa20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 TNKS2Q9H2K2 1166 aa20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 GLOD4Q9HC38 313 aa20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 RRAGDQ9NQL2 400 aaPredicted RBP20.11■□□□□ 0.81
PDLIM2-221ENST00000622702 MYO15AQ9UKN7 3530 aa20.1■□□□□ 0.81
PDLIM2-221ENST00000622702 ADAM23O75077 832 aa20.1■□□□□ 0.81
PDLIM2-221ENST00000622702 IGSF6O95976 241 aa20.1■□□□□ 0.81
PDLIM2-221ENST00000622702 TDGF1P13385 188 aa20.1■□□□□ 0.81
PDLIM2-221ENST00000622702 CES1P23141 567 aa20.1■□□□□ 0.81
PDLIM2-221ENST00000622702 ACTN2P35609 894 aa20.1■□□□□ 0.81
PDLIM2-221ENST00000622702 MAXP61244 160 aa20.1■□□□□ 0.81
PDLIM2-221ENST00000622702 FAM182AQ5T1J6 154 aa20.1■□□□□ 0.81
PDLIM2-221ENST00000622702 ARHGEF18Q6ZSZ5 1173 aa20.1■□□□□ 0.81
PDLIM2-221ENST00000622702 MAATS1Q7Z4T9 603 aa20.1■□□□□ 0.81
PDLIM2-221ENST00000622702 ZNF366Q8N895 744 aa20.1■□□□□ 0.81
PDLIM2-221ENST00000622702 OR2A12Q8NGT7 310 aa20.1■□□□□ 0.81
PDLIM2-221ENST00000622702 EXOC2Q96KP1 924 aa20.1■□□□□ 0.81
PDLIM2-221ENST00000622702 NUDCD1Q96RS6 583 aa20.1■□□□□ 0.81
PDLIM2-221ENST00000622702 SLC25A51Q9H1U9 297 aa20.1■□□□□ 0.81
PDLIM2-221ENST00000622702 GBA3Q9H227 469 aa20.1■□□□□ 0.81
PDLIM2-221ENST00000622702 FAM86C1Q9NVL1 165 aa20.1■□□□□ 0.81
PDLIM2-221ENST00000622702 PAK5Q9P286 719 aa20.1■□□□□ 0.81
PDLIM2-221ENST00000622702 TTLL3Q9Y4R7 772 aa20.1■□□□□ 0.81
PDLIM2-221ENST00000622702 CACNA1HO95180 2353 aa20.09■□□□□ 0.81
PDLIM2-221ENST00000622702 DMDP11532 3685 aa20.09■□□□□ 0.81
PDLIM2-221ENST00000622702 KRT14P02533 472 aa20.09■□□□□ 0.81
PDLIM2-221ENST00000622702 EPHX1P07099 455 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms