RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 TNNI3P19429 210 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 LPOP22079 712 aaPredicted RBP9.19□□□□□ -0.94
HDAC9-229ENST00000622668 FMO4P31512 558 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 ACTR1BP42025 376 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 FNTAP49354 379 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 TAS2R40P59535 323 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 ACTR1AP61163 376 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 GBE1Q04446 702 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 RCN2Q14257 317 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 FAM83EQ2M2I3 478 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 KLHL35Q6PF15 583 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 ENPP7Q6UWV6 458 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 B3GNT9Q6UX72 402 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 CYP2U1Q7Z449 544 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 RTL3Q8N8U3 475 aaKnown RBP9.19□□□□□ -0.94
HDAC9-229ENST00000622668 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.19□□□□□ -0.94
HDAC9-229ENST00000622668 FAM46DQ8NEK8 389 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 OR52K1Q8NGK4 314 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 MCOLN3Q8TDD5 553 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 SORCS1Q8WY21 1168 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 SLC38A3Q99624 504 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 FAM167BQ9BTA0 163 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 NUSAP1Q9BXS6 441 aaKnown RBP9.19□□□□□ -0.94
HDAC9-229ENST00000622668 FAM83DQ9H4H8 585 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 PCDH9Q9HC56 1237 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 GPAMQ9HCL2 828 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 COMMD8Q9NX08 183 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 PCDHA3Q9Y5H8 950 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 A0A0A0MRY4 1105 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 PRKCGP05129 697 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 ALDH4A1P30038 563 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 PTPN9P43378 593 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 ADCY2Q08462 1091 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 MPP3Q13368 585 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 ITGA9Q13797 1035 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 CCINQ13939 588 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 TBCCQ15814 346 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 CAMK1DQ8IU85 385 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 MCUR1Q96AQ8 359 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 FAR2Q96K12 515 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 SPATA13Q96N96 652 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 NMUR1Q9HB89 426 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 PTPRHQ9HD43 1115 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 PIGVQ9NUD9 493 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 TMLHEQ9NVH6 421 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 SUSD2Q9UGT4 822 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 FBXW11Q9UKB1 542 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 RNF112Q9ULX5 631 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 MRFAP1Q9Y605 127 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 EDDM13A0A1B0GTR0 161 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 DYRK3O43781 588 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 NTSR1P30989 418 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 GLRBP48167 497 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 NEK3P51956 506 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 MAP7Q14244 749 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 SPDYE7PQ495Y7 208 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 CARD16Q5EG05 197 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 LRRC6Q86X45 466 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 HHIPQ96QV1 700 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 ERP44Q9BS26 406 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 ECT2Q9H8V3 914 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 PRDM16Q9HAZ2 1276 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 FNIP2Q9P278 1114 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 MYH6P13533 1939 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 FFAR2O15552 330 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 ZBTB14O43829 449 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 IDSP22304 550 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 CES1P23141 567 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 DSC2Q02487 901 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 TFF2Q03403 129 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 FOXM1Q08050 763 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 SIM2Q14190 667 aaPredicted RBP9.18□□□□□ -0.94
HDAC9-229ENST00000622668 DSC3Q14574 896 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 PPP1R15BQ5SWA1 713 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 FNBP1LQ5T0N5 605 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 CCDC121Q6ZUS5 278 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 STRA8Q7Z7C7 330 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 TMEM25Q86YD3 366 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 NUDCD3Q8IVD9 361 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 MAML1Q92585 1016 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 P2RY11Q96G91 374 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 ACAT2Q9BWD1 397 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 SYTL2Q9HCH5 934 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 KLHL14Q9P2G3 628 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 RAD51CO43502 376 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 BEST1O76090 585 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 SEC24AO95486 1093 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 STAU1O95793 577 aaKnown RBP9.18□□□□□ -0.94
HDAC9-229ENST00000622668 CYP1A2P05177 515 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 STMN1P16949 149 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 CCNHP51946 323 aaPredicted RBP9.18□□□□□ -0.94
HDAC9-229ENST00000622668 MLLT6P55198 1093 aaPredicted RBP9.18□□□□□ -0.94
HDAC9-229ENST00000622668 AP1S1P61966 158 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 PARP6Q2NL67 630 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 PLEKHG6Q3KR16 790 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 STXBP5Q5T5C0 1151 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 SH3PXD2AQ5TCZ1 1133 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 EMBQ6PCB8 327 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 CCNJLQ8IV13 435 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 PSTKQ8IV42 348 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms