RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 HOXB6P17509 224 aaKnown RBP9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 GDI1P31150 447 aa9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 MORN1Q5T089 497 aa9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 KCNK18Q7Z418 384 aa9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 NLRP14Q86W24 1093 aa9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 SYBUQ9NX95 663 aa9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 TNFP01375 233 aa9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 CHRNA1P02708 482 aa9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 LTA4HP09960 611 aaKnown RBP9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 FMO4P31512 558 aa9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 CENPAP49450 140 aa9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 IL10RBQ08334 325 aa9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 SF3A3Q12874 501 aaKnown RBP eCLIP9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 MTF1Q14872 753 aa9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 GRAMD1BQ3KR37 738 aa9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 ZNF470Q6ECI4 717 aa9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 NTPCRQ9BSD7 190 aaKnown RBP9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 DPY30Q9C005 99 aa9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 PARVBQ9HBI1 364 aa9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 WDR6Q9NNW5 1121 aaKnown RBP9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 NCF1BA6NI72 391 aaPredicted RBP9.84□□□□□ -0.84
TNFRSF9-204ENST00000615230 NCF1CA8MVU1 366 aaPredicted RBP9.84□□□□□ -0.84
TNFRSF9-204ENST00000615230 NCF1P14598 390 aaPredicted RBP9.84□□□□□ -0.84
TNFRSF9-204ENST00000615230 CPA3P15088 417 aa9.84□□□□□ -0.84
TNFRSF9-204ENST00000615230 MGAT1P26572 445 aa9.84□□□□□ -0.84
TNFRSF9-204ENST00000615230 FUT2Q10981 343 aa9.84□□□□□ -0.84
TNFRSF9-204ENST00000615230 DPYSL3Q14195 570 aa9.84□□□□□ -0.84
TNFRSF9-204ENST00000615230 ATP13A5Q4VNC0 1218 aa9.84□□□□□ -0.84
TNFRSF9-204ENST00000615230 SLC26A9Q7LBE3 791 aa9.84□□□□□ -0.84
TNFRSF9-204ENST00000615230 ASZ1Q8WWH4 475 aa9.84□□□□□ -0.84
TNFRSF9-204ENST00000615230 PAFAH2Q99487 392 aa9.84□□□□□ -0.84
TNFRSF9-204ENST00000615230 SEMA3CQ99985 751 aa9.84□□□□□ -0.84
TNFRSF9-204ENST00000615230 NCDNQ9UBB6 729 aa9.84□□□□□ -0.84
TNFRSF9-204ENST00000615230 IL36AQ9UHA7 158 aa9.84□□□□□ -0.84
TNFRSF9-204ENST00000615230 DCTN4Q9UJW0 460 aa9.84□□□□□ -0.84
TNFRSF9-204ENST00000615230 C15orf38-AP3S2A0A0A6YYH1 394 aa9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 WDR27A2RRH5 827 aa9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 GSAPA4D1B5 854 aa9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 NEMP2A6NFY4 417 aa9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 WTIPA6NIX2 430 aaPredicted RBP9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 SLC25A14O95258 325 aaPredicted RBP9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 C1RP00736 705 aa9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 CYBAP13498 195 aa9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 ALADP13716 330 aa9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 ZNF24P17028 368 aa9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 GHRHRQ02643 423 aa9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 NIPAL1Q6NVV3 410 aa9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 RGS9BPQ6ZS82 235 aa9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 ARPINQ7Z6K5 226 aa9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 SRLQ86TD4 932 aa9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 AGGF1Q8N302 714 aaeCLIP9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 TMEM132CQ8N3T6 1108 aa9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 RFWD2Q8NHY2 731 aa9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 RMDN2Q96LZ7 410 aa9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 STRADBQ9C0K7 418 aa9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 DNAJC18Q9H819 358 aa9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 ADGRA3Q8IWK6 1321 aa9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 L1CAMP32004 1257 aa9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 HSPA13P48723 471 aa9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 LILRA4P59901 499 aa9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 FAM124AQ86V42 546 aa9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 PNPLA8Q9NP80 782 aa9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 COL20A1Q9P218 1284 aa9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 SCOCQ9UIL1 159 aa9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 FAF1Q9UNN5 650 aaPredicted RBP9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 ESYT3A0FGR9 886 aa9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 PNMA6AP0CW24 399 aaPredicted RBP9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 FCGR1AP12314 374 aa9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 DLG4P78352 724 aa9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 MRPS22P82650 360 aaKnown RBP9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 PRR23BQ6ZRT6 265 aa9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 ICA1LQ8NDH6 482 aa9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 ZSCAN18Q8TBC5 510 aaPredicted RBP9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 MAGEB18Q96M61 343 aa9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 ACOX2Q99424 681 aa9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 MRPL46Q9H2W6 279 aaKnown RBP9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 HHATLQ9HCP6 504 aa9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 GLYATL1P3A0A0U1RQE8 302 aa9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 AVPR1BP47901 424 aa9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 ITPRIPL2Q3MIP1 535 aa9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 CARD16Q5EG05 197 aa9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 VITQ6UXI7 678 aa9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 CSPG4P5Q96PW8 444 aa9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 ZFYVE1Q9HBF4 777 aa9.83□□□□□ -0.84
TNFRSF9-204ENST00000615230 BTN3A1O00481 513 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 TM7SF2O76062 418 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 EEF1DP29692 281 aaKnown RBP9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 DHPSP49366 369 aaPredicted RBP9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 MLLT1Q03111 559 aaPredicted RBP9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 PDE1CQ14123 709 aaPredicted RBP9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 KYNUQ16719 465 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 TAF8Q7Z7C8 310 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 OR5B17Q8NGF7 314 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 HAPLN3Q96S86 360 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 NELL2Q99435 816 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 PRMT1Q99873 361 aaKnown RBP9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 GABRQQ9UN88 632 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 KCNU1A8MYU2 1149 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 ZNF185O15231 689 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 IFNA16P05015 189 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms