RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 GPR141Q7Z602 305 aa22.23■■□□□ 1.15
POLR2J3-220ENST00000613744 GPR180Q86V85 440 aa22.23■■□□□ 1.15
POLR2J3-220ENST00000613744 NPAS4Q8IUM7 802 aa22.23■■□□□ 1.15
POLR2J3-220ENST00000613744 ABI1Q8IZP0 508 aa22.23■■□□□ 1.15
POLR2J3-220ENST00000613744 GALNT4Q8N4A0 578 aa22.23■■□□□ 1.15
POLR2J3-220ENST00000613744 TOP1MTQ969P6 601 aa22.23■■□□□ 1.15
POLR2J3-220ENST00000613744 PHF12Q96QT6 1004 aa22.23■■□□□ 1.15
POLR2J3-220ENST00000613744 ELAC1Q9H777 363 aaKnown RBP22.23■■□□□ 1.15
POLR2J3-220ENST00000613744 MOCS1Q9NZB8 636 aa22.23■■□□□ 1.15
POLR2J3-220ENST00000613744 FUOMA2VDF0 154 aa22.22■■□□□ 1.15
POLR2J3-220ENST00000613744 TMEM114B3SHH9 223 aa22.22■■□□□ 1.15
POLR2J3-220ENST00000613744 ITGB3P05106 788 aa22.22■■□□□ 1.15
POLR2J3-220ENST00000613744 PDGFRBP09619 1106 aa22.22■■□□□ 1.15
POLR2J3-220ENST00000613744 RFC1P35251 1148 aaPredicted RBP22.22■■□□□ 1.15
POLR2J3-220ENST00000613744 HALP42357 657 aa22.22■■□□□ 1.15
POLR2J3-220ENST00000613744 CYTH1Q15438 398 aa22.22■■□□□ 1.15
POLR2J3-220ENST00000613744 MGAT5BQ3V5L5 792 aa22.22■■□□□ 1.15
POLR2J3-220ENST00000613744 C1orf127Q8N9H9 656 aa22.22■■□□□ 1.15
POLR2J3-220ENST00000613744 SLC4A11Q8NBS3 891 aa22.22■■□□□ 1.15
POLR2J3-220ENST00000613744 ZNF420Q8TAQ5 688 aaPredicted RBP22.22■■□□□ 1.15
POLR2J3-220ENST00000613744 LENG8Q96PV6 779 aaPredicted RBP22.22■■□□□ 1.15
POLR2J3-220ENST00000613744 CCDC68Q9H2F9 335 aa22.22■■□□□ 1.15
POLR2J3-220ENST00000613744 CLK4Q9HAZ1 481 aaKnown RBP22.22■■□□□ 1.15
POLR2J3-220ENST00000613744 MRPL40Q9NQ50 206 aaKnown RBP22.22■■□□□ 1.15
POLR2J3-220ENST00000613744 COPG2Q9UBF2 871 aa22.22■■□□□ 1.15
POLR2J3-220ENST00000613744 TBKBP1A7MCY6 615 aa22.22■■□□□ 1.15
POLR2J3-220ENST00000613744 H2AFYO75367 372 aaKnown RBP22.22■■□□□ 1.15
POLR2J3-220ENST00000613744 XRCC1P18887 633 aaPredicted RBP22.22■■□□□ 1.15
POLR2J3-220ENST00000613744 TPSB2P20231 275 aa22.22■■□□□ 1.15
POLR2J3-220ENST00000613744 PIK3R1P27986 724 aa22.22■■□□□ 1.15
POLR2J3-220ENST00000613744 MYL6P60660 151 aa22.22■■□□□ 1.15
POLR2J3-220ENST00000613744 SOX4Q06945 474 aaPredicted RBP22.22■■□□□ 1.15
POLR2J3-220ENST00000613744 TPSAB1Q15661 275 aa22.22■■□□□ 1.15
POLR2J3-220ENST00000613744 CPSF7Q8N684 471 aaKnown RBP22.22■■□□□ 1.15
POLR2J3-220ENST00000613744 DDHD1Q8NEL9 900 aa22.22■■□□□ 1.15
POLR2J3-220ENST00000613744 BHLHE22Q8NFJ8 381 aaPredicted RBP22.22■■□□□ 1.15
POLR2J3-220ENST00000613744 TMIGD2Q96BF3 282 aa22.22■■□□□ 1.15
POLR2J3-220ENST00000613744 SIGLEC10Q96LC7 697 aa22.22■■□□□ 1.15
POLR2J3-220ENST00000613744 CDRT15Q96T59 188 aa22.22■■□□□ 1.15
POLR2J3-220ENST00000613744 IMPG2Q9BZV3 1241 aa22.22■■□□□ 1.15
POLR2J3-220ENST00000613744 HACD3Q9P035 362 aa22.22■■□□□ 1.15
POLR2J3-220ENST00000613744 A0A087WXM4 84 aa22.21■■□□□ 1.15
POLR2J3-220ENST00000613744 FBP2O00757 339 aa22.21■■□□□ 1.15
POLR2J3-220ENST00000613744 KCNA4P22459 653 aa22.21■■□□□ 1.15
POLR2J3-220ENST00000613744 BCAP31P51572 246 aa22.21■■□□□ 1.15
POLR2J3-220ENST00000613744 PDK1Q15118 436 aa22.21■■□□□ 1.15
POLR2J3-220ENST00000613744 SHHQ15465 462 aa22.21■■□□□ 1.15
POLR2J3-220ENST00000613744 CCDC153Q494R4 210 aa22.21■■□□□ 1.15
POLR2J3-220ENST00000613744 XKR4Q5GH76 650 aa22.21■■□□□ 1.15
POLR2J3-220ENST00000613744 KCNT1Q5JUK3 1230 aa22.21■■□□□ 1.15
POLR2J3-220ENST00000613744 STEAP4Q687X5 459 aa22.21■■□□□ 1.15
POLR2J3-220ENST00000613744 ISLR2Q6UXK2 745 aa22.21■■□□□ 1.15
POLR2J3-220ENST00000613744 C10orf107Q8IVU9 208 aa22.21■■□□□ 1.15
POLR2J3-220ENST00000613744 HERVK_113Q902F9 699 aa22.21■■□□□ 1.15
POLR2J3-220ENST00000613744 CASD1Q96PB1 797 aa22.21■■□□□ 1.15
POLR2J3-220ENST00000613744 RMI1Q9H9A7 625 aa22.21■■□□□ 1.15
POLR2J3-220ENST00000613744 COG4Q9H9E3 785 aa22.21■■□□□ 1.15
POLR2J3-220ENST00000613744 BCLAF3A2AJT9 711 aaKnown RBP22.21■■□□□ 1.15
POLR2J3-220ENST00000613744 H7C0C1 242 aa22.21■■□□□ 1.15
POLR2J3-220ENST00000613744 EFCAB14O75071 495 aa22.21■■□□□ 1.15
POLR2J3-220ENST00000613744 ZMPSTE24O75844 475 aa22.21■■□□□ 1.15
POLR2J3-220ENST00000613744 ALDH1A2O94788 518 aa22.21■■□□□ 1.15
POLR2J3-220ENST00000613744 ESRRBO95718 433 aa22.21■■□□□ 1.15
POLR2J3-220ENST00000613744 THP07101 528 aa22.21■■□□□ 1.15
POLR2J3-220ENST00000613744 ATP5OP48047 213 aa22.21■■□□□ 1.15
POLR2J3-220ENST00000613744 KCNC4Q03721 635 aa22.21■■□□□ 1.15
POLR2J3-220ENST00000613744 PEX6Q13608 980 aa22.21■■□□□ 1.15
POLR2J3-220ENST00000613744 PPP2R5DQ14738 602 aa22.21■■□□□ 1.15
POLR2J3-220ENST00000613744 NOMO2Q5JPE7 1267 aa22.21■■□□□ 1.15
POLR2J3-220ENST00000613744 IRAK1BP1Q5VVH5 260 aa22.21■■□□□ 1.15
POLR2J3-220ENST00000613744 KRT80Q6KB66 452 aa22.21■■□□□ 1.15
POLR2J3-220ENST00000613744 DCDC5Q6ZRR9 648 aa22.21■■□□□ 1.15
POLR2J3-220ENST00000613744 TMEM110Q86TL2 294 aa22.21■■□□□ 1.15
POLR2J3-220ENST00000613744 WDTC1Q8N5D0 677 aa22.21■■□□□ 1.15
POLR2J3-220ENST00000613744 EME1Q96AY2 570 aa22.21■■□□□ 1.15
POLR2J3-220ENST00000613744 ISOC1Q96CN7 298 aa22.21■■□□□ 1.15
POLR2J3-220ENST00000613744 ANKRD60Q9BZ19 345 aa22.21■■□□□ 1.15
POLR2J3-220ENST00000613744 DPP3Q9NY33 737 aa22.21■■□□□ 1.15
POLR2J3-220ENST00000613744 PTPRSQ13332 1948 aa22.2■■□□□ 1.15
POLR2J3-220ENST00000613744 AIM2O14862 343 aa22.2■■□□□ 1.14
POLR2J3-220ENST00000613744 TRUB2O95900 331 aaKnown RBP22.2■■□□□ 1.14
POLR2J3-220ENST00000613744 OCM2P0CE71 109 aa22.2■■□□□ 1.14
POLR2J3-220ENST00000613744 OCMP0CE72 109 aaPredicted RBP22.2■■□□□ 1.14
POLR2J3-220ENST00000613744 KCNE1P15382 129 aa22.2■■□□□ 1.14
POLR2J3-220ENST00000613744 RGS19P49795 217 aa22.2■■□□□ 1.14
POLR2J3-220ENST00000613744 PDE1CQ14123 709 aaPredicted RBP22.2■■□□□ 1.14
POLR2J3-220ENST00000613744 BCL2A1Q16548 175 aa22.2■■□□□ 1.14
POLR2J3-220ENST00000613744 NIPAL1Q6NVV3 410 aa22.2■■□□□ 1.14
POLR2J3-220ENST00000613744 ZNF280BQ86YH2 543 aa22.2■■□□□ 1.14
POLR2J3-220ENST00000613744 SLC15A3Q8IY34 581 aa22.2■■□□□ 1.14
POLR2J3-220ENST00000613744 PPP1R10Q96QC0 940 aaKnown RBP22.2■■□□□ 1.14
POLR2J3-220ENST00000613744 OLAHQ9NV23 265 aa22.2■■□□□ 1.14
POLR2J3-220ENST00000613744 SIX4Q9UIU6 781 aa22.2■■□□□ 1.14
POLR2J3-220ENST00000613744 GNPTGQ9UJJ9 305 aa22.2■■□□□ 1.14
POLR2J3-220ENST00000613744 RALGAPA2Q2PPJ7 1873 aa22.2■■□□□ 1.14
POLR2J3-220ENST00000613744 CASTOR2A6NHX0 329 aa22.19■■□□□ 1.14
POLR2J3-220ENST00000613744 ACOT8O14734 319 aa22.19■■□□□ 1.14
POLR2J3-220ENST00000613744 B4GALT3O60512 393 aa22.19■■□□□ 1.14
POLR2J3-220ENST00000613744 TADA2AO75478 443 aa22.19■■□□□ 1.14
POLR2J3-220ENST00000613744 DGKIO75912 1065 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms