RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 MTO1Q9Y2Z2 717 aaKnown RBP10.99□□□□□ -0.65
FAM3A-221ENST00000612856 DNAH12Q6ZR08 3092 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 TRBV23OR9-2A0A075B6M9 112 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 ZMPSTE24O75844 475 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 HSPA4LO95757 839 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 ASLP04424 464 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 TFPTP0C1Z6 253 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 NFKBIAP25963 317 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 AQP5P55064 265 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 ESRRGP62508 458 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 NTHL1P78549 312 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 GBE1Q04446 702 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 INTS6LQ5JSJ4 861 aaKnown RBP10.99□□□□□ -0.65
FAM3A-221ENST00000612856 RETSATQ6NUM9 610 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 UNC45BQ8IWX7 931 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 KBTBD2Q8IY47 623 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 OR7D4Q8NG98 312 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 ART4Q93070 314 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 DGCR14Q96DF8 476 aaKnown RBP10.99□□□□□ -0.65
FAM3A-221ENST00000612856 ZFYVE19Q96K21 471 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 NUF2Q9BZD4 464 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 SCUBE2Q9NQ36 999 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 PPM1HQ9ULR3 514 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 GNEQ9Y223 722 aaKnown RBP10.99□□□□□ -0.65
FAM3A-221ENST00000612856 PKP3Q9Y446 797 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 QSER1Q2KHR3 1735 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 COL2A1P02458 1487 aaPredicted RBP10.99□□□□□ -0.65
FAM3A-221ENST00000612856 KDM1AO60341 852 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 PAGE1O75459 146 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 STBD1O95210 358 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 CORO1AP31146 461 aaKnown RBP10.99□□□□□ -0.65
FAM3A-221ENST00000612856 GSTA3Q16772 222 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 TTC23LQ6PF05 361 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 PATL1Q86TB9 770 aaKnown RBP10.99□□□□□ -0.65
FAM3A-221ENST00000612856 NUDCD3Q8IVD9 361 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 TTC9BQ8N6N2 239 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 PPHLN1Q8NEY8 458 aaKnown RBP10.99□□□□□ -0.65
FAM3A-221ENST00000612856 SUSD6Q92537 303 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 KLK6Q92876 244 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 STRA6Q9BX79 667 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 CXCL16Q9H2A7 254 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 TNKS2Q9H2K2 1166 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 CCDC134Q9H6E4 229 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 PAK5Q9P286 719 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 SIX4Q9UIU6 781 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 IQANK1A0A1B0GTG1 560 aa10.98□□□□□ -0.65
FAM3A-221ENST00000612856 PDZK1P1A8MUH7 402 aa10.98□□□□□ -0.65
FAM3A-221ENST00000612856 PAPSS1O43252 624 aaPredicted RBP10.98□□□□□ -0.65
FAM3A-221ENST00000612856 DGKIO75912 1065 aa10.98□□□□□ -0.65
FAM3A-221ENST00000612856 MYOGP15173 224 aa10.98□□□□□ -0.65
FAM3A-221ENST00000612856 CXCR3P49682 368 aa10.98□□□□□ -0.65
FAM3A-221ENST00000612856 AQP4P55087 323 aa10.98□□□□□ -0.65
FAM3A-221ENST00000612856 CENPCQ03188 943 aa10.98□□□□□ -0.65
FAM3A-221ENST00000612856 CGB2Q6NT52 195 aa10.98□□□□□ -0.65
FAM3A-221ENST00000612856 RAB44Q7Z6P3 723 aaPredicted RBP10.98□□□□□ -0.65
FAM3A-221ENST00000612856 DNAJB7Q7Z6W7 309 aaPredicted RBP10.98□□□□□ -0.65
FAM3A-221ENST00000612856 OSTM1Q86WC4 334 aa10.98□□□□□ -0.65
FAM3A-221ENST00000612856 RBM15BQ8NDT2 890 aaKnown RBP10.98□□□□□ -0.65
FAM3A-221ENST00000612856 CAPN10Q9HC96 672 aa10.98□□□□□ -0.65
FAM3A-221ENST00000612856 PSMC3IPQ9P2W1 217 aaPredicted RBP10.98□□□□□ -0.65
FAM3A-221ENST00000612856 CIDEBQ9UHD4 219 aa10.98□□□□□ -0.65
FAM3A-221ENST00000612856 DPP7Q9UHL4 492 aa10.98□□□□□ -0.65
FAM3A-221ENST00000612856 FBXO10Q9UK96 956 aa10.98□□□□□ -0.65
FAM3A-221ENST00000612856 CRYL1Q9Y2S2 319 aa10.98□□□□□ -0.65
FAM3A-221ENST00000612856 PCDHB9Q9Y5E1 797 aa10.98□□□□□ -0.65
FAM3A-221ENST00000612856 VAPBO95292 243 aa10.98□□□□□ -0.65
FAM3A-221ENST00000612856 GNRH1P01148 92 aa10.98□□□□□ -0.65
FAM3A-221ENST00000612856 T-ENOLP0DO92 83 aa10.98□□□□□ -0.65
FAM3A-221ENST00000612856 VCLP18206 1134 aa10.98□□□□□ -0.65
FAM3A-221ENST00000612856 PEX2P28328 305 aa10.98□□□□□ -0.65
FAM3A-221ENST00000612856 KCNQ1P51787 676 aa10.98□□□□□ -0.65
FAM3A-221ENST00000612856 PDAP1Q13442 181 aaKnown RBP10.98□□□□□ -0.65
FAM3A-221ENST00000612856 STARD3Q14849 445 aa10.98□□□□□ -0.65
FAM3A-221ENST00000612856 PDK4Q16654 411 aa10.98□□□□□ -0.65
FAM3A-221ENST00000612856 MFSD5Q6N075 450 aa10.98□□□□□ -0.65
FAM3A-221ENST00000612856 TMPRSS6Q8IU80 811 aa10.98□□□□□ -0.65
FAM3A-221ENST00000612856 FBXO36Q8NEA4 188 aa10.98□□□□□ -0.65
FAM3A-221ENST00000612856 DQX1Q8TE96 717 aaKnown RBP10.98□□□□□ -0.65
FAM3A-221ENST00000612856 CASP10Q92851 521 aa10.98□□□□□ -0.65
FAM3A-221ENST00000612856 OXNAD1Q96HP4 312 aaPredicted RBP10.98□□□□□ -0.65
FAM3A-221ENST00000612856 SAR1AQ9NR31 198 aa10.98□□□□□ -0.65
FAM3A-221ENST00000612856 THG1LQ9NWX6 298 aaKnown RBP10.98□□□□□ -0.65
FAM3A-221ENST00000612856 SLC17A7Q9P2U7 560 aa10.98□□□□□ -0.65
FAM3A-221ENST00000612856 FOXD2O60548 495 aaPredicted RBP10.98□□□□□ -0.65
FAM3A-221ENST00000612856 AVILO75366 819 aa10.98□□□□□ -0.65
FAM3A-221ENST00000612856 C1RP00736 705 aa10.98□□□□□ -0.65
FAM3A-221ENST00000612856 SERPINF2P08697 491 aa10.98□□□□□ -0.65
FAM3A-221ENST00000612856 TCF4P15884 667 aa10.98□□□□□ -0.65
FAM3A-221ENST00000612856 MAT2AP31153 395 aaKnown RBP10.98□□□□□ -0.65
FAM3A-221ENST00000612856 HOXA11P31270 313 aaPredicted RBP10.98□□□□□ -0.65
FAM3A-221ENST00000612856 DLG1Q12959 904 aa10.98□□□□□ -0.65
FAM3A-221ENST00000612856 TRMT5Q32P41 509 aaKnown RBP10.98□□□□□ -0.65
FAM3A-221ENST00000612856 SYTL3Q4VX76 610 aa10.98□□□□□ -0.65
FAM3A-221ENST00000612856 ZCCHC23Q6ZST2 131 aa10.98□□□□□ -0.65
FAM3A-221ENST00000612856 DET1Q7L5Y6 550 aa10.98□□□□□ -0.65
FAM3A-221ENST00000612856 SPPL2BQ8TCT7 592 aa10.98□□□□□ -0.65
FAM3A-221ENST00000612856 HSFY1Q96LI6 401 aa10.98□□□□□ -0.65
FAM3A-221ENST00000612856 IARS2Q9NSE4 1012 aaKnown RBP10.98□□□□□ -0.65
FAM3A-221ENST00000612856 TBC1D23Q9NUY8 699 aa10.98□□□□□ -0.65
FAM3A-221ENST00000612856 ARHGAP26Q9UNA1 814 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms