RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 YBX1P67809 324 aaKnown RBP20.66■□□□□ 0.9
SSBP3-216ENST00000610401 ARHGAP1Q07960 439 aa20.66■□□□□ 0.9
SSBP3-216ENST00000610401 PPIDQ08752 370 aaKnown RBP20.66■□□□□ 0.9
SSBP3-216ENST00000610401 CAPRIN1Q14444 709 aaKnown RBP20.66■□□□□ 0.9
SSBP3-216ENST00000610401 TRIM67Q6ZTA4 783 aa20.66■□□□□ 0.9
SSBP3-216ENST00000610401 TMEM135Q86UB9 458 aa20.66■□□□□ 0.9
SSBP3-216ENST00000610401 HERC6Q8IVU3 1022 aa20.66■□□□□ 0.9
SSBP3-216ENST00000610401 ZNF786Q8N393 782 aa20.66■□□□□ 0.9
SSBP3-216ENST00000610401 MARVELD2Q8N4S9 558 aa20.66■□□□□ 0.9
SSBP3-216ENST00000610401 BTBD9Q96Q07 612 aa20.66■□□□□ 0.9
SSBP3-216ENST00000610401 NAT9Q9BTE0 207 aa20.66■□□□□ 0.9
SSBP3-216ENST00000610401 C11orf84Q9BUA3 381 aaPredicted RBP20.66■□□□□ 0.9
SSBP3-216ENST00000610401 TMEM30AQ9NV96 361 aa20.66■□□□□ 0.9
SSBP3-216ENST00000610401 TSR3Q9UJK0 312 aaKnown RBP20.66■□□□□ 0.9
SSBP3-216ENST00000610401 PRORSD1PA6NEY8 169 aa20.65■□□□□ 0.9
SSBP3-216ENST00000610401 PLIN5Q00G26 463 aa20.65■□□□□ 0.9
SSBP3-216ENST00000610401 LCA5Q86VQ0 697 aa20.65■□□□□ 0.9
SSBP3-216ENST00000610401 NAT16Q8N8M0 369 aa20.65■□□□□ 0.9
SSBP3-216ENST00000610401 FAM47BQ8NA70 645 aa20.65■□□□□ 0.9
SSBP3-216ENST00000610401 WNT8BQ93098 351 aa20.65■□□□□ 0.9
SSBP3-216ENST00000610401 ZBTB26Q9HCK0 441 aa20.65■□□□□ 0.9
SSBP3-216ENST00000610401 HACD1B0YJ81 288 aa20.65■□□□□ 0.9
SSBP3-216ENST00000610401 PPP6CO00743 305 aa20.65■□□□□ 0.9
SSBP3-216ENST00000610401 CASQ2O14958 399 aaPredicted RBP20.65■□□□□ 0.9
SSBP3-216ENST00000610401 TIMM44O43615 452 aa20.65■□□□□ 0.9
SSBP3-216ENST00000610401 STAMBPO95630 424 aa20.65■□□□□ 0.9
SSBP3-216ENST00000610401 ALOX15P16050 662 aaPredicted RBP20.65■□□□□ 0.9
SSBP3-216ENST00000610401 MAXP61244 160 aa20.65■□□□□ 0.9
SSBP3-216ENST00000610401 CDK18Q07002 472 aa20.65■□□□□ 0.9
SSBP3-216ENST00000610401 PRKAA1Q13131 559 aa20.65■□□□□ 0.9
SSBP3-216ENST00000610401 DBN1Q16643 649 aa20.65■□□□□ 0.9
SSBP3-216ENST00000610401 KIF19Q2TAC6 998 aa20.65■□□□□ 0.9
SSBP3-216ENST00000610401 NCSTNQ92542 709 aa20.65■□□□□ 0.9
SSBP3-216ENST00000610401 MPHOSPH6Q99547 160 aaKnown RBP20.65■□□□□ 0.9
SSBP3-216ENST00000610401 STAP1Q9ULZ2 295 aa20.65■□□□□ 0.9
SSBP3-216ENST00000610401 RNF11Q9Y3C5 154 aa20.65■□□□□ 0.9
SSBP3-216ENST00000610401 CNMDO75829 334 aa20.65■□□□□ 0.9
SSBP3-216ENST00000610401 MPOP05164 745 aa20.65■□□□□ 0.9
SSBP3-216ENST00000610401 CDK4P11802 303 aa20.65■□□□□ 0.9
SSBP3-216ENST00000610401 MAP7D1Q3KQU3 841 aa20.65■□□□□ 0.9
SSBP3-216ENST00000610401 LPCAT2Q7L5N7 544 aa20.65■□□□□ 0.9
SSBP3-216ENST00000610401 APOBEC3FQ8IUX4 373 aaKnown RBP20.65■□□□□ 0.9
SSBP3-216ENST00000610401 TMEM40Q8WWA1 233 aa20.65■□□□□ 0.9
SSBP3-216ENST00000610401 DNAJB3Q8WWF6 145 aa20.65■□□□□ 0.9
SSBP3-216ENST00000610401 BRD8Q9H0E9 1235 aa20.65■□□□□ 0.9
SSBP3-216ENST00000610401 HNRNPCP07910 306 aaKnown RBP eCLIP20.64■□□□□ 0.892e-6■■■□□ 18.7
SSBP3-216ENST00000610401 STMN1P16949 149 aa20.64■□□□□ 0.89
SSBP3-216ENST00000610401 GLUD2P49448 558 aa20.64■□□□□ 0.89
SSBP3-216ENST00000610401 SLC7A2P52569 658 aa20.64■□□□□ 0.89
SSBP3-216ENST00000610401 FASTKQ14296 549 aaKnown RBP20.64■□□□□ 0.89
SSBP3-216ENST00000610401 STXBP5Q5T5C0 1151 aa20.64■□□□□ 0.89
SSBP3-216ENST00000610401 ZYG11AQ6WRX3 759 aa20.64■□□□□ 0.89
SSBP3-216ENST00000610401 STRADAQ7RTN6 431 aa20.64■□□□□ 0.89
SSBP3-216ENST00000610401 OFCC1Q8IZS5 231 aa20.64■□□□□ 0.89
SSBP3-216ENST00000610401 PGAM4Q8N0Y7 254 aa20.64■□□□□ 0.89
SSBP3-216ENST00000610401 CNTD1Q8N815 330 aa20.64■□□□□ 0.89
SSBP3-216ENST00000610401 WDCPQ9H6R7 721 aa20.64■□□□□ 0.89
SSBP3-216ENST00000610401 ZNF408Q9H9D4 720 aa20.64■□□□□ 0.89
SSBP3-216ENST00000610401 MYBPHLA2RUH7 354 aa20.64■□□□□ 0.89
SSBP3-216ENST00000610401 SUPT7LO94864 414 aa20.64■□□□□ 0.89
SSBP3-216ENST00000610401 LRIG2O94898 1065 aa20.64■□□□□ 0.89
SSBP3-216ENST00000610401 YAP1P46937 504 aaKnown RBP20.64■□□□□ 0.89
SSBP3-216ENST00000610401 EXOC8Q8IYI6 725 aa20.64■□□□□ 0.89
SSBP3-216ENST00000610401 SH3RF2Q8TEC5 729 aa20.64■□□□□ 0.89
SSBP3-216ENST00000610401 FAF1Q9UNN5 650 aaPredicted RBP20.64■□□□□ 0.89
SSBP3-216ENST00000610401 OR51F1A6NGY5 319 aa20.63■□□□□ 0.89
SSBP3-216ENST00000610401 LRRC14BA6NHZ5 514 aa20.63■□□□□ 0.89
SSBP3-216ENST00000610401 TRMUO75648 421 aaKnown RBP20.63■□□□□ 0.89
SSBP3-216ENST00000610401 SLC1A2P43004 574 aa20.63■□□□□ 0.89
SSBP3-216ENST00000610401 NDST2P52849 883 aa20.63■□□□□ 0.89
SSBP3-216ENST00000610401 ZBTB49Q6ZSB9 765 aa20.63■□□□□ 0.89
SSBP3-216ENST00000610401 NUP93Q8N1F7 819 aa20.63■□□□□ 0.89
SSBP3-216ENST00000610401 TMEM151AQ8N4L1 468 aa20.63■□□□□ 0.89
SSBP3-216ENST00000610401 OR6P1Q8NGX9 317 aa20.63■□□□□ 0.89
SSBP3-216ENST00000610401 OSBPL2Q9H1P3 480 aa20.63■□□□□ 0.89
SSBP3-216ENST00000610401 CRYL1Q9Y2S2 319 aa20.63■□□□□ 0.89
SSBP3-216ENST00000610401 RLFQ13129 1914 aa20.63■□□□□ 0.89
SSBP3-216ENST00000610401 DCLK1O15075 740 aa20.63■□□□□ 0.89
SSBP3-216ENST00000610401 DDNO94850 711 aaPredicted RBP20.63■□□□□ 0.89
SSBP3-216ENST00000610401 ATP5BP06576 529 aaKnown RBP20.63■□□□□ 0.89
SSBP3-216ENST00000610401 CYP2B6P20813 491 aa20.63■□□□□ 0.89
SSBP3-216ENST00000610401 NOS2P35228 1153 aa20.63■□□□□ 0.89
SSBP3-216ENST00000610401 GRM5P41594 1212 aa20.63■□□□□ 0.89
SSBP3-216ENST00000610401 ADARP55265 1226 aaKnown RBP20.63■□□□□ 0.89
SSBP3-216ENST00000610401 FUT11Q495W5 492 aa20.63■□□□□ 0.89
SSBP3-216ENST00000610401 TSTD2Q5T7W7 516 aa20.63■□□□□ 0.89
SSBP3-216ENST00000610401 KIAA0319Q5VV43 1072 aa20.63■□□□□ 0.89
SSBP3-216ENST00000610401 MIPOL1Q8TD10 442 aa20.63■□□□□ 0.89
SSBP3-216ENST00000610401 CANT1Q8WVQ1 401 aa20.63■□□□□ 0.89
SSBP3-216ENST00000610401 SNX27Q96L92 541 aa20.63■□□□□ 0.89
SSBP3-216ENST00000610401 NDFIP2Q9NV92 336 aa20.63■□□□□ 0.89
SSBP3-216ENST00000610401 TBC1D30Q9Y2I9 924 aa20.63■□□□□ 0.89
SSBP3-216ENST00000610401 FYNP06241 537 aa20.62■□□□□ 0.89
SSBP3-216ENST00000610401 SLC12A1Q13621 1099 aa20.62■□□□□ 0.89
SSBP3-216ENST00000610401 MYBPC3Q14896 1274 aa20.62■□□□□ 0.89
SSBP3-216ENST00000610401 KCTD21Q4G0X4 260 aa20.62■□□□□ 0.89
SSBP3-216ENST00000610401 CLEC20AQ6ZU45 233 aa20.62■□□□□ 0.89
SSBP3-216ENST00000610401 FAM35AQ86V20 835 aa20.62■□□□□ 0.89
SSBP3-216ENST00000610401 CLVS1Q8IUQ0 354 aaPredicted RBP20.62■□□□□ 0.89
SSBP3-216ENST00000610401 CYGBQ8WWM9 190 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms