RNA–Protein interactions for RNA: ENST00000608657.5

ITGB5-212, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-212ENST00000608657 CDKL3Q8IVW4 592 aaPredicted RBP9.03□□□□□ -0.96
ITGB5-212ENST00000608657 ZNF687Q8N1G0 1237 aa9.03□□□□□ -0.96
ITGB5-212ENST00000608657 BBS5Q8N3I7 341 aa9.03□□□□□ -0.96
ITGB5-212ENST00000608657 SH2D3CQ8N5H7 860 aa9.03□□□□□ -0.96
ITGB5-212ENST00000608657 ALLCQ8N6M5 410 aa9.03□□□□□ -0.96
ITGB5-212ENST00000608657 KDM1BQ8NB78 822 aa9.03□□□□□ -0.96
ITGB5-212ENST00000608657 TSEN2Q8NCE0 465 aaKnown RBP9.03□□□□□ -0.96
ITGB5-212ENST00000608657 BCAS4Q8TDM0 211 aa9.03□□□□□ -0.96
ITGB5-212ENST00000608657 USP33Q8TEY7 942 aa9.03□□□□□ -0.96
ITGB5-212ENST00000608657 HDAC11Q96DB2 347 aa9.03□□□□□ -0.96
ITGB5-212ENST00000608657 MRGPRX3Q96LB0 322 aa9.03□□□□□ -0.96
ITGB5-212ENST00000608657 ZNF599Q96NL3 588 aa9.03□□□□□ -0.96
ITGB5-212ENST00000608657 LGMNQ99538 433 aa9.03□□□□□ -0.96
ITGB5-212ENST00000608657 FAM118BQ9BPY3 351 aa9.03□□□□□ -0.96
ITGB5-212ENST00000608657 CCDC77Q9BR77 488 aa9.03□□□□□ -0.96
ITGB5-212ENST00000608657 FRMD8P1Q9BZ68 369 aaPredicted RBP9.03□□□□□ -0.96
ITGB5-212ENST00000608657 ROPN1BQ9BZX4 212 aaPredicted RBP9.03□□□□□ -0.96
ITGB5-212ENST00000608657 BRD8Q9H0E9 1235 aa9.03□□□□□ -0.96
ITGB5-212ENST00000608657 NSRP1Q9H0G5 558 aaKnown RBP9.03□□□□□ -0.96
ITGB5-212ENST00000608657 ROPN1Q9HAT0 212 aaPredicted RBP9.03□□□□□ -0.96
ITGB5-212ENST00000608657 PDFQ9HBH1 243 aa9.03□□□□□ -0.96
ITGB5-212ENST00000608657 CACNA2D2Q9NY47 1150 aa9.03□□□□□ -0.96
ITGB5-212ENST00000608657 SMARCAL1Q9NZC9 954 aa9.03□□□□□ -0.96
ITGB5-212ENST00000608657 WHRNQ9P202 907 aa9.03□□□□□ -0.96
ITGB5-212ENST00000608657 HS3ST2Q9Y278 367 aa9.03□□□□□ -0.96
ITGB5-212ENST00000608657 SIT1Q9Y3P8 196 aa9.03□□□□□ -0.96
ITGB5-212ENST00000608657 MTF2Q9Y483 593 aaPredicted RBP9.03□□□□□ -0.96
ITGB5-212ENST00000608657 ANKRD36A6QL64 1941 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 EDDM13A0A1B0GTR0 161 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 ESYT3A0FGR9 886 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 ANTXRLA6NF34 631 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 TTC34A8MYJ7 566 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 HACD1B0YJ81 288 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 NDUFAB1O14561 156 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 MAFKO60675 156 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 TMCC1O94876 653 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 MT-CO1P00395 513 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 EPHX1P07099 455 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 RBP3P10745 1247 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 HLA-EP13747 358 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 HOXB2P14652 356 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 CCNCP24863 283 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 RPS9P46781 194 aaKnown RBP9.02□□□□□ -0.97
ITGB5-212ENST00000608657 VASPP50552 380 aaPredicted RBP9.02□□□□□ -0.97
ITGB5-212ENST00000608657 PMS2P54278 862 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 GYS2P54840 703 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 EIF3EP60228 445 aaKnown RBP9.02□□□□□ -0.97
ITGB5-212ENST00000608657 RHOAP61586 193 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 ZNF33AQ06730 810 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 XRCC4Q13426 336 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 RFTN1Q14699 578 aaPredicted RBP9.02□□□□□ -0.97
ITGB5-212ENST00000608657 LBRQ14739 615 aaKnown RBP9.02□□□□□ -0.97
ITGB5-212ENST00000608657 STARD3Q14849 445 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 DLG2Q15700 870 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 KRT71Q3SY84 523 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 INO80DQ53TQ3 878 aaPredicted RBP9.02□□□□□ -0.97
ITGB5-212ENST00000608657 TMCO4Q5TGY1 634 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 HEATR6Q6AI08 1181 aaKnown RBP9.02□□□□□ -0.97
ITGB5-212ENST00000608657 C22orf39Q6P5X5 142 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 CCDC137Q6PK04 289 aaKnown RBP9.02□□□□□ -0.97
ITGB5-212ENST00000608657 CNPY4Q8N129 248 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 ZNF366Q8N895 744 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 IL17RCQ8NAC3 791 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 TXNDC5Q8NBS9 432 aaKnown RBP9.02□□□□□ -0.97
ITGB5-212ENST00000608657 LRRN4Q8WUT4 740 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 TFB1MQ8WVM0 346 aaKnown RBP9.02□□□□□ -0.97
ITGB5-212ENST00000608657 PBXIP1Q96AQ6 731 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 CLDN23Q96B33 292 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 MYO19Q96H55 970 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 CCDC114Q96M63 670 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 TSGA13Q96PP4 275 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 QKIQ96PU8 341 aaKnown RBP eCLIP9.02□□□□□ -0.97
ITGB5-212ENST00000608657 ACOX2Q99424 681 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 FERMT1Q9BQL6 677 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 IER2Q9BTL4 223 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 TMEM109Q9BVC6 243 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 CINPQ9BW66 212 aaPredicted RBP9.02□□□□□ -0.97
ITGB5-212ENST00000608657 CEP44Q9C0F1 390 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 EPN3Q9H201 632 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 CHRDQ9H2X0 955 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 PABPC3Q9H361 631 aaKnown RBP9.02□□□□□ -0.97
ITGB5-212ENST00000608657 EPHX3Q9H6B9 360 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 PPCSQ9HAB8 311 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 HAUS2Q9NVX0 235 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 SEPT10Q9P0V9 454 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 SUN2Q9UH99 717 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 SLCO3A1Q9UIG8 710 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 HCN2Q9UL51 889 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 MMP17Q9ULZ9 603 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 FCF1Q9Y324 198 aaKnown RBP9.02□□□□□ -0.97
ITGB5-212ENST00000608657 RRP15Q9Y3B9 282 aaKnown RBP9.02□□□□□ -0.97
ITGB5-212ENST00000608657 ACTL7AQ9Y615 435 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 STON1Q9Y6Q2 735 aa9.02□□□□□ -0.97
ITGB5-212ENST00000608657 CHURC1-FNTBB4DL54 471 aa9.01□□□□□ -0.97
ITGB5-212ENST00000608657 WASH3PC4AMC7 463 aa9.01□□□□□ -0.97
ITGB5-212ENST00000608657 K7ERQ8 282 aa9.01□□□□□ -0.97
ITGB5-212ENST00000608657 SGK1O00141 431 aa9.01□□□□□ -0.97
ITGB5-212ENST00000608657 MATN3O15232 486 aa9.01□□□□□ -0.97
ITGB5-212ENST00000608657 MTSS1O43312 755 aa9.01□□□□□ -0.97
ITGB5-212ENST00000608657 SMAD6O43541 496 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms