RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 AURKCQ9UQB9 309 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 EVPLLA8MZ36 301 aa12.72□□□□□ -0.37
CTCFL-218ENST00000608440 AXIN1O15169 862 aa12.72□□□□□ -0.37
CTCFL-218ENST00000608440 FAM13AO94988 1023 aa12.72□□□□□ -0.37
CTCFL-218ENST00000608440 CSH1P0DML2 217 aa12.72□□□□□ -0.37
CTCFL-218ENST00000608440 CSH2P0DML3 217 aa12.72□□□□□ -0.37
CTCFL-218ENST00000608440 PKLRP30613 574 aa12.72□□□□□ -0.37
CTCFL-218ENST00000608440 MLLT6P55198 1093 aaPredicted RBP12.72□□□□□ -0.37
CTCFL-218ENST00000608440 TAGLNQ01995 201 aaKnown RBP12.72□□□□□ -0.37
CTCFL-218ENST00000608440 LAMC2Q13753 1193 aa12.72□□□□□ -0.37
CTCFL-218ENST00000608440 SLC36A3Q495N2 470 aa12.72□□□□□ -0.37
CTCFL-218ENST00000608440 AASDHQ4L235 1098 aaPredicted RBP12.72□□□□□ -0.37
CTCFL-218ENST00000608440 PODNQ7Z5L7 613 aa12.72□□□□□ -0.37
CTCFL-218ENST00000608440 PIGZQ86VD9 579 aa12.72□□□□□ -0.37
CTCFL-218ENST00000608440 LDHDQ86WU2 507 aa12.72□□□□□ -0.37
CTCFL-218ENST00000608440 THNSL1Q8IYQ7 743 aa12.72□□□□□ -0.37
CTCFL-218ENST00000608440 CACTIN-AS1Q8N1I8 211 aa12.72□□□□□ -0.37
CTCFL-218ENST00000608440 FBXL6Q8N531 539 aa12.72□□□□□ -0.37
CTCFL-218ENST00000608440 CELF2-AS1Q8N7Q2 184 aa12.72□□□□□ -0.37
CTCFL-218ENST00000608440 MOCOSQ96EN8 888 aa12.72□□□□□ -0.37
CTCFL-218ENST00000608440 C11orf70Q9BRQ4 267 aa12.72□□□□□ -0.37
CTCFL-218ENST00000608440 TOR3AQ9H497 397 aa12.72□□□□□ -0.37
CTCFL-218ENST00000608440 TCF7L2Q9NQB0 619 aa12.72□□□□□ -0.37
CTCFL-218ENST00000608440 IL37Q9NZH6 218 aa12.72□□□□□ -0.37
CTCFL-218ENST00000608440 DRG1Q9Y295 367 aaKnown RBP12.72□□□□□ -0.37
CTCFL-218ENST00000608440 KIAA1551Q9HCM1 1747 aa12.72□□□□□ -0.37
CTCFL-218ENST00000608440 TRIM38O00635 465 aa12.72□□□□□ -0.37
CTCFL-218ENST00000608440 GRIN3BO60391 1043 aa12.72□□□□□ -0.37
CTCFL-218ENST00000608440 CPNE6O95741 557 aa12.72□□□□□ -0.37
CTCFL-218ENST00000608440 SERPINE1P05121 402 aa12.72□□□□□ -0.37
CTCFL-218ENST00000608440 RBL1P28749 1068 aa12.72□□□□□ -0.37
CTCFL-218ENST00000608440 B2MP61769 119 aa12.72□□□□□ -0.37
CTCFL-218ENST00000608440 CDC20Q12834 499 aa12.72□□□□□ -0.37
CTCFL-218ENST00000608440 IKQ13123 557 aaPredicted RBP12.72□□□□□ -0.37
CTCFL-218ENST00000608440 TXNRD3NBQ6F5E7 133 aa12.72□□□□□ -0.37
CTCFL-218ENST00000608440 HAUS6Q7Z4H7 955 aa12.72□□□□□ -0.37
CTCFL-218ENST00000608440 ADCK1Q86TW2 530 aa12.72□□□□□ -0.37
CTCFL-218ENST00000608440 ZNF444Q8N0Y2 327 aaPredicted RBP12.72□□□□□ -0.37
CTCFL-218ENST00000608440 METTL2AQ96IZ6 378 aaKnown RBP12.72□□□□□ -0.37
CTCFL-218ENST00000608440 SNX18Q96RF0 628 aa12.72□□□□□ -0.37
CTCFL-218ENST00000608440 SYTL2Q9HCH5 934 aa12.72□□□□□ -0.37
CTCFL-218ENST00000608440 PMF1-BGLAPU3KQ54 211 aa12.72□□□□□ -0.37
CTCFL-218ENST00000608440 SNX2O60749 519 aa12.71□□□□□ -0.37
CTCFL-218ENST00000608440 CFL1P23528 166 aaKnown RBP12.71□□□□□ -0.37
CTCFL-218ENST00000608440 ALDH7A1P49419 539 aaKnown RBP12.71□□□□□ -0.37
CTCFL-218ENST00000608440 HLCSP50747 726 aa12.71□□□□□ -0.37
CTCFL-218ENST00000608440 ZNF132P52740 706 aa12.71□□□□□ -0.37
CTCFL-218ENST00000608440 ABCE1P61221 599 aaKnown RBP12.71□□□□□ -0.37
CTCFL-218ENST00000608440 GBE1Q04446 702 aa12.71□□□□□ -0.37
CTCFL-218ENST00000608440 PIGFQ07326 219 aa12.71□□□□□ -0.37
CTCFL-218ENST00000608440 PICALMQ13492 652 aa12.71□□□□□ -0.37
CTCFL-218ENST00000608440 NXNQ6DKJ4 435 aa12.71□□□□□ -0.37
CTCFL-218ENST00000608440 GTF2IRD2BQ6EKJ0 949 aa12.71□□□□□ -0.37
CTCFL-218ENST00000608440 KCTD20Q7Z5Y7 419 aa12.71□□□□□ -0.37
CTCFL-218ENST00000608440 GTF2IRD2Q86UP8 949 aa12.71□□□□□ -0.37
CTCFL-218ENST00000608440 CAMK1DQ8IU85 385 aa12.71□□□□□ -0.37
CTCFL-218ENST00000608440 OR2T34Q8NGX1 318 aa12.71□□□□□ -0.37
CTCFL-218ENST00000608440 CANT1Q8WVQ1 401 aa12.71□□□□□ -0.37
CTCFL-218ENST00000608440 ASB9Q96DX5 294 aa12.71□□□□□ -0.37
CTCFL-218ENST00000608440 ALOXE3Q9BYJ1 711 aa12.71□□□□□ -0.37
CTCFL-218ENST00000608440 C2orf40Q9H1Z8 148 aa12.71□□□□□ -0.37
CTCFL-218ENST00000608440 DHX33Q9H6R0 707 aaKnown RBP12.71□□□□□ -0.37
CTCFL-218ENST00000608440 ZNF277Q9NRM2 450 aaPredicted RBP12.71□□□□□ -0.37
CTCFL-218ENST00000608440 TMEM216Q9P0N5 145 aa12.71□□□□□ -0.37
CTCFL-218ENST00000608440 VPS28Q9UK41 221 aa12.71□□□□□ -0.37
CTCFL-218ENST00000608440 HMX2A2RU54 273 aa12.71□□□□□ -0.38
CTCFL-218ENST00000608440 PDZK1P1A8MUH7 402 aa12.71□□□□□ -0.38
CTCFL-218ENST00000608440 TRIM77I1YAP6 450 aa12.71□□□□□ -0.38
CTCFL-218ENST00000608440 ITGAVP06756 1048 aa12.71□□□□□ -0.38
CTCFL-218ENST00000608440 PTP4A2Q12974 167 aa12.71□□□□□ -0.38
CTCFL-218ENST00000608440 PCLAFQ15004 111 aa12.71□□□□□ -0.38
CTCFL-218ENST00000608440 Q5BKY6 102 aa12.71□□□□□ -0.38
CTCFL-218ENST00000608440 XAF1Q6GPH4 301 aa12.71□□□□□ -0.38
CTCFL-218ENST00000608440 FAM122CQ6P4D5 195 aa12.71□□□□□ -0.38
CTCFL-218ENST00000608440 EPGNQ6UW88 154 aa12.71□□□□□ -0.38
CTCFL-218ENST00000608440 EPHX4Q8IUS5 362 aa12.71□□□□□ -0.38
CTCFL-218ENST00000608440 LYSMD2Q8IV50 215 aa12.71□□□□□ -0.38
CTCFL-218ENST00000608440 UNC45BQ8IWX7 931 aa12.71□□□□□ -0.38
CTCFL-218ENST00000608440 TCAIMQ8N3R3 496 aa12.71□□□□□ -0.38
CTCFL-218ENST00000608440 RP9Q8TA86 221 aaKnown RBP12.71□□□□□ -0.38
CTCFL-218ENST00000608440 HEXIM2Q96MH2 286 aaKnown RBP12.71□□□□□ -0.38
CTCFL-218ENST00000608440 EMCNQ9ULC0 261 aa12.71□□□□□ -0.38
CTCFL-218ENST00000608440 VANGL2Q9ULK5 521 aa12.71□□□□□ -0.38
CTCFL-218ENST00000608440 ZNRF3Q9ULT6 936 aa12.71□□□□□ -0.38
CTCFL-218ENST00000608440 SCN9AQ15858 1988 aa12.7□□□□□ -0.38
CTCFL-218ENST00000608440 ADAMTSL1Q8N6G6 1762 aa12.7□□□□□ -0.38
CTCFL-218ENST00000608440 DLEC1Q9Y238 1755 aa12.7□□□□□ -0.38
CTCFL-218ENST00000608440 M0R3G1 203 aa12.7□□□□□ -0.38
CTCFL-218ENST00000608440 TLR3O15455 904 aaKnown RBP12.7□□□□□ -0.38
CTCFL-218ENST00000608440 TFE3P19532 575 aaPredicted RBP12.7□□□□□ -0.38
CTCFL-218ENST00000608440 CBLP22681 906 aa12.7□□□□□ -0.38
CTCFL-218ENST00000608440 HTR1BP28222 390 aa12.7□□□□□ -0.38
CTCFL-218ENST00000608440 SLC7A1P30825 629 aa12.7□□□□□ -0.38
CTCFL-218ENST00000608440 GABRB2P47870 512 aa12.7□□□□□ -0.38
CTCFL-218ENST00000608440 NLRP11P59045 1033 aaKnown RBP12.7□□□□□ -0.38
CTCFL-218ENST00000608440 SBK1Q52WX2 424 aa12.7□□□□□ -0.38
CTCFL-218ENST00000608440 C6orf10Q5SRN2 563 aa12.7□□□□□ -0.38
CTCFL-218ENST00000608440 DACT2Q5SW24 774 aa12.7□□□□□ -0.38
CTCFL-218ENST00000608440 C12orf60Q5U649 245 aa12.7□□□□□ -0.38
CTCFL-218ENST00000608440 PLA2G4FQ68DD2 849 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms