RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 IZUMO3Q5VZ72 239 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 ANKRD26P1Q6NSI1 321 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 AADACL2Q6P093 401 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 IYDQ6PHW0 289 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 USP51Q70EK9 711 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 CYS1Q717R9 158 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 PRPF39Q86UA1 669 aaKnown RBP4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 ZNF761Q86XN6 746 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 PALB2Q86YC2 1186 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 CRLF3Q8IUI8 442 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 SLITRK4Q8IW52 837 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 LGI4Q8N135 537 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 LCORLQ8N3X6 602 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 TTC9BQ8N6N2 239 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 PACRGLQ8N7B6 248 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 MAGEB6Q8N7X4 407 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 LMO3Q8TAP4 145 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 PNPT1Q8TCS8 783 aaKnown RBP4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 SLC2A14Q8TDB8 520 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 ACMSDQ8TDX5 336 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 ADAMTS17Q8TE56 1095 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 DCAKDQ8WVC6 231 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 PYDC1Q8WXC3 89 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 TRIB2Q92519 343 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 KISS1RQ969F8 398 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 TOP1MTQ969P6 601 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 C12orf43Q96C57 262 aaKnown RBP4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 PRR11Q96HE9 360 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 APOPT1Q96IL0 206 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 C9orf72Q96LT7 481 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 SAMD11Q96NU1 681 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 SNX18Q96RF0 628 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 CYTH2Q99418 400 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 PLIN2Q99541 437 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 BCL7BQ9BQE9 202 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 RIOK1Q9BRS2 568 aaKnown RBP4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 ANKRD60Q9BZ19 345 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 NDEL1Q9GZM8 345 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 HOXD1Q9GZZ0 328 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 RPF2Q9H7B2 306 aaKnown RBP4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 RMND5AQ9H871 391 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 ARMT1Q9H993 441 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 MRPL40Q9NQ50 206 aaKnown RBP4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 FBXO6Q9NRD1 293 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 OLFML3Q9NRN5 406 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 THAP1Q9NVV9 213 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 THG1LQ9NWX6 298 aaKnown RBP4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 PPARGC1AQ9UBK2 798 aaKnown RBP4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 IPO11Q9UI26 975 aaKnown RBP4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 XPO7Q9UIA9 1087 aaKnown RBP4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 CDH22Q9UJ99 828 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 GTF3C4Q9UKN8 822 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 ZNRF3Q9ULT6 936 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 RABL2BQ9UNT1 228 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 PLLPQ9Y342 182 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 ZNF451Q9Y4E5 1061 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 UGT2A1Q9Y4X1 527 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 CPQQ9Y646 472 aa4.15□□□□□ -1.75
HMGB1P50-201ENST00000605814 TMEM2Q9UHN6 1383 aa4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 CDK5RAP2Q96SN8 1893 aa4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 TRBV23OR9-2A0A075B6M9 112 aa4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 FAM237BA0A1B0GVD1 139 aa4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 GSTTP1A0A1W2PQM5 241 aa4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 hCG_1642624A0A1W2PR95 340 aa4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 ILVBLA1L0T0 632 aa4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 DENND3A2RUS2 1198 aa4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 ISPDA4D126 451 aa4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 ARHGEF35A5YM69 484 aa4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 ARHGAP42A6NI28 874 aa4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 LRRIQ4A6NIV6 560 aa4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 ZNF839A8K0R7 811 aa4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 SYCE1LA8MT33 242 aa4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 PRR5-ARHGAP8B1AHC4 643 aa4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 E9PMD0 336 aa4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 POC1B-GALNT4F8VUJ3 575 aa4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 I3L4J1 428 aa4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 FOXN3O00409 490 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 TXNDC9O14530 226 aa4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 XPO1O14980 1071 aaKnown RBP4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 MATN3O15232 486 aa4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 EIF3DO15371 548 aaKnown RBP eCLIP4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 CLOCKO15516 846 aa4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 EDIL3O43854 480 aa4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 CCNT1O60563 726 aaKnown RBP4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 UGT1A9O60656 530 aa4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 BCAS2O75934 225 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 AKAP3O75969 853 aa4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 SLITRK3O94933 977 aa4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 KRT18P05783 430 aaKnown RBP4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 ABCB1P08183 1280 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 ACRP10323 421 aa4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 CCDC130P13994 396 aa4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 ATP6V1B1P15313 513 aa4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 PHKG2P15735 406 aa4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 GAP43P17677 238 aa4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 UGT1A6P19224 532 aa4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 UGT1A1P22309 533 aa4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 UGT1A4P22310 534 aa4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 TGM1P22735 817 aa4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 JAK1P23458 1154 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms