RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 FOXN1O15353 648 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 HS6ST1O60243 411 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 ZNF780AO75290 641 aaPredicted RBP8.97□□□□□ -0.97
COMMD3-215ENST00000602574 APOL3O95236 402 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 HTR3BO95264 441 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 AGR2O95994 175 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 PROS1P07225 676 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 FDX1P10109 184 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 MAGEA4P43358 317 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 FNTBP49356 437 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 PAK1Q13153 545 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 RRP1BQ14684 758 aaKnown RBP8.97□□□□□ -0.97
COMMD3-215ENST00000602574 RTN1Q16799 776 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 KIAA1324Q6UXG2 1013 aaKnown RBP8.97□□□□□ -0.97
COMMD3-215ENST00000602574 GRAMD1CQ8IYS0 662 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 IFNL2Q8IZJ0 200 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 ZNF366Q8N895 744 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 ABHD11Q8NFV4 315 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 ZNF461Q8TAF7 563 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 SLC26A7Q8TE54 656 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 CSRNP1Q96S65 589 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 BCL7BQ9BQE9 202 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 TRIM62Q9BVG3 475 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 TWSG1Q9GZX9 223 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 QRSL1Q9H0R6 528 aaKnown RBP8.97□□□□□ -0.97
COMMD3-215ENST00000602574 MVB12BQ9H7P6 319 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 SSU72Q9NP77 194 aaKnown RBP8.97□□□□□ -0.97
COMMD3-215ENST00000602574 RGS18Q9NS28 235 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 PSME2Q9UL46 239 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 HCN2Q9UL51 889 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 RAB23Q9ULC3 237 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 SORCS3Q9UPU3 1222 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 TLR6Q9Y2C9 796 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 RNF11Q9Y3C5 154 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 HRH3Q9Y5N1 445 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 ST14Q9Y5Y6 855 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 TRPM3Q9HCF6 1732 aaPredicted RBP8.97□□□□□ -0.97
COMMD3-215ENST00000602574 ADAMTS7Q9UKP4 1686 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 GSTTP1A0A1W2PQM5 241 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 ARHGAP42A6NI28 874 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 SAGE2PA6NJ88 616 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 USP17L13C9JLJ4 530 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 USP17L17D6RBQ6 530 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 UBXN8O00124 270 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 ABCD4O14678 606 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 PLD2O14939 933 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 TRIM16O95361 564 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 HRGP04196 525 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 PRKCBP05771 671 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 ANXA6P08133 673 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 MCF2P10911 925 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 DDCP20711 480 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 MMP8P22894 467 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 CD40LGP29965 261 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 UQCRC1P31930 480 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 ADH7P40394 386 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 SULT1E1P49888 294 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 IFITM3Q01628 133 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 INCA1Q0VD86 236 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 ILF2Q12905 390 aaKnown RBP8.97□□□□□ -0.97
COMMD3-215ENST00000602574 AANATQ16613 207 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 KRT80Q6KB66 452 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 RINT1Q6NUQ1 792 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 SUSD1Q6UWL2 747 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 USP49Q70CQ1 688 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 GPAT4Q86UL3 456 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 RETREG3Q86VR2 466 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 GPALPP1Q8IXQ4 340 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.97□□□□□ -0.97
COMMD3-215ENST00000602574 ADAM32Q8TC27 787 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 BLOC1S5Q8TDH9 187 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 PYDC1Q8WXC3 89 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 TRIM43Q96BQ3 446 aaPredicted RBP8.97□□□□□ -0.97
COMMD3-215ENST00000602574 NPLQ9BXD5 320 aaPredicted RBP8.97□□□□□ -0.97
COMMD3-215ENST00000602574 PTPRHQ9HD43 1115 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 ZNF275Q9NSD4 429 aaPredicted RBP8.97□□□□□ -0.97
COMMD3-215ENST00000602574 ARHGAP20Q9P2F6 1191 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 HEY2Q9UBP5 337 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 MTF2Q9Y483 593 aaPredicted RBP8.97□□□□□ -0.97
COMMD3-215ENST00000602574 ASB4Q9Y574 426 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 PCDHB5Q9Y5E4 795 aa8.97□□□□□ -0.97
COMMD3-215ENST00000602574 SCN4AP35499 1836 aa8.96□□□□□ -0.97
COMMD3-215ENST00000602574 C1orf167Q5SNV9 1468 aa8.96□□□□□ -0.97
COMMD3-215ENST00000602574 COL22A1Q8NFW1 1626 aaPredicted RBP8.96□□□□□ -0.97
COMMD3-215ENST00000602574 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.96□□□□□ -0.97
COMMD3-215ENST00000602574 H3BM21 787 aa8.96□□□□□ -0.97
COMMD3-215ENST00000602574 FZD6O60353 706 aa8.96□□□□□ -0.97
COMMD3-215ENST00000602574 EIF1BO60739 113 aaKnown RBP8.96□□□□□ -0.97
COMMD3-215ENST00000602574 TGM6O95932 706 aa8.96□□□□□ -0.97
COMMD3-215ENST00000602574 KRT19P08727 400 aa8.96□□□□□ -0.97
COMMD3-215ENST00000602574 CCND2P30279 289 aa8.96□□□□□ -0.97
COMMD3-215ENST00000602574 OXTRP30559 389 aa8.96□□□□□ -0.97
COMMD3-215ENST00000602574 EIF1P41567 113 aaKnown RBP8.96□□□□□ -0.97
COMMD3-215ENST00000602574 NKX3-2P78367 333 aa8.96□□□□□ -0.97
COMMD3-215ENST00000602574 FOXK1P85037 733 aa8.96□□□□□ -0.97
COMMD3-215ENST00000602574 CNTN2Q02246 1040 aa8.96□□□□□ -0.97
COMMD3-215ENST00000602574 TRAF2Q12933 501 aa8.96□□□□□ -0.97
COMMD3-215ENST00000602574 KCNC3Q14003 757 aa8.96□□□□□ -0.97
COMMD3-215ENST00000602574 CAPRIN1Q14444 709 aaKnown RBP8.96□□□□□ -0.97
COMMD3-215ENST00000602574 PSMD5Q16401 504 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms