RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 TPM1P09493 284 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 CR2P20023 1033 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 CDC25BP30305 580 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 NUDT1P36639 197 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 MAPK8P45983 427 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 PPP2CBP62714 309 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 RACK1P63244 317 aaKnown RBP8.93□□□□□ -0.98
SSBP4-208ENST00000600628 PPP2CAP67775 309 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 IL10RBQ08334 325 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 NSUN2Q08J23 767 aaKnown RBP eCLIP8.93□□□□□ -0.98
SSBP4-208ENST00000600628 DPYSL3Q14195 570 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 PAFAH1B3Q15102 231 aaKnown RBP8.93□□□□□ -0.98
SSBP4-208ENST00000600628 SMTNL2Q2TAL5 461 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 MYLK3Q32MK0 819 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 ATP13A4Q4VNC1 1196 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 ARSIQ5FYB1 569 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 LRRC38Q5VT99 294 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 ALG1LQ6GMV1 187 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 ARHGAP36Q6ZRI8 547 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 LRRC49Q8IUZ0 686 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 RHOT2Q8IXI1 618 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 PQLC3Q8N755 202 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 TMEM145Q8NBT3 493 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 HCAR2Q8TDS4 363 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 CTNNBL1Q8WYA6 563 aaPredicted RBP8.93□□□□□ -0.98
SSBP4-208ENST00000600628 CCDC114Q96M63 670 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 ZNF599Q96NL3 588 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 OMDQ99983 421 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 ZNF670Q9BS34 389 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 ZDHHC5Q9C0B5 715 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 TNKS2Q9H2K2 1166 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 ZWILCHQ9H900 591 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 PREBQ9HCU5 417 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 TM9SF3Q9HD45 589 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 FSCN3Q9NQT6 498 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.93□□□□□ -0.98
SSBP4-208ENST00000600628 HECAQ9UBI9 543 aaPredicted RBP8.93□□□□□ -0.98
SSBP4-208ENST00000600628 DKK3Q9UBP4 350 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 IL36AQ9UHA7 158 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 HPCAL4Q9UM19 191 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 NCKAP1Q9Y2A7 1128 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 FCF1Q9Y324 198 aaKnown RBP8.93□□□□□ -0.98
SSBP4-208ENST00000600628 REXO2Q9Y3B8 237 aaKnown RBP8.93□□□□□ -0.98
SSBP4-208ENST00000600628 COL5A1P20908 1838 aaPredicted RBP8.93□□□□□ -0.98
SSBP4-208ENST00000600628 ACACBO00763 2458 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 RCCD1A6NED2 376 aa8.92□□□□□ -0.98
SSBP4-208ENST00000600628 H3BRJ5 948 aa8.92□□□□□ -0.98
SSBP4-208ENST00000600628 WNT9AO14904 365 aa8.92□□□□□ -0.98
SSBP4-208ENST00000600628 MUSKO15146 869 aa8.92□□□□□ -0.98
SSBP4-208ENST00000600628 VILLO15195 856 aa8.92□□□□□ -0.98
SSBP4-208ENST00000600628 BUB1BO60566 1050 aaPredicted RBP8.92□□□□□ -0.98
SSBP4-208ENST00000600628 KCNK5O95279 499 aa8.92□□□□□ -0.98
SSBP4-208ENST00000600628 WNT1P04628 370 aa8.92□□□□□ -0.98
SSBP4-208ENST00000600628 SYPP08247 313 aa8.92□□□□□ -0.98
SSBP4-208ENST00000600628 ADRB1P08588 477 aa8.92□□□□□ -0.98
SSBP4-208ENST00000600628 ADRB3P13945 408 aa8.92□□□□□ -0.98
SSBP4-208ENST00000600628 CD59P13987 128 aa8.92□□□□□ -0.98
SSBP4-208ENST00000600628 CSRP1P21291 193 aaKnown RBP8.92□□□□□ -0.98
SSBP4-208ENST00000600628 AMPD1P23109 780 aa8.92□□□□□ -0.98
SSBP4-208ENST00000600628 CTSKP43235 329 aa8.92□□□□□ -0.98
SSBP4-208ENST00000600628 RGRP47804 291 aa8.92□□□□□ -0.98
SSBP4-208ENST00000600628 PAPOLAP51003 745 aaKnown RBP8.92□□□□□ -0.98
SSBP4-208ENST00000600628 AFF3P51826 1226 aaKnown RBP8.92□□□□□ -0.98
SSBP4-208ENST00000600628 ATXN3P54252 364 aaPredicted RBP8.92□□□□□ -0.98
SSBP4-208ENST00000600628 GRIK2Q13002 908 aa8.92□□□□□ -0.98
SSBP4-208ENST00000600628 SLC14A1Q13336 389 aa8.92□□□□□ -0.98
SSBP4-208ENST00000600628 RFTN1Q14699 578 aaPredicted RBP8.92□□□□□ -0.98
SSBP4-208ENST00000600628 PDK2Q15119 407 aa8.92□□□□□ -0.98
SSBP4-208ENST00000600628 ZNF423Q2M1K9 1284 aa8.92□□□□□ -0.98
SSBP4-208ENST00000600628 TSR1Q2NL82 804 aaKnown RBP8.92□□□□□ -0.98
SSBP4-208ENST00000600628 ZNF284Q2VY69 593 aa8.92□□□□□ -0.98
SSBP4-208ENST00000600628 ZNF805Q5CZA5 627 aa8.92□□□□□ -0.98
SSBP4-208ENST00000600628 PPP6R3Q5H9R7 873 aaPredicted RBP8.92□□□□□ -0.98
SSBP4-208ENST00000600628 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.92□□□□□ -0.98
SSBP4-208ENST00000600628 ERN2Q76MJ5 926 aaKnown RBP8.92□□□□□ -0.98
SSBP4-208ENST00000600628 PARS2Q7L3T8 475 aaKnown RBP8.92□□□□□ -0.98
SSBP4-208ENST00000600628 ZCCHC9Q8N567 271 aaKnown RBP8.92□□□□□ -0.98
SSBP4-208ENST00000600628 TEX26Q8N6G2 289 aa8.92□□□□□ -0.98
SSBP4-208ENST00000600628 PCDH19Q8TAB3 1148 aa8.92□□□□□ -0.98
SSBP4-208ENST00000600628 GANCQ8TET4 914 aa8.92□□□□□ -0.98
SSBP4-208ENST00000600628 ASB12Q8WXK4 309 aa8.92□□□□□ -0.98
SSBP4-208ENST00000600628 ECHDC3Q96DC8 303 aa8.92□□□□□ -0.98
SSBP4-208ENST00000600628 CELF6Q96J87 481 aaKnown RBP8.92□□□□□ -0.98
SSBP4-208ENST00000600628 TSGA13Q96PP4 275 aa8.92□□□□□ -0.98
SSBP4-208ENST00000600628 PSKH2Q96QS6 385 aa8.92□□□□□ -0.98
SSBP4-208ENST00000600628 GTPBP2Q9BX10 602 aaKnown RBP8.92□□□□□ -0.98
SSBP4-208ENST00000600628 MIR1-1HGQ9H1L0 117 aa8.92□□□□□ -0.98
SSBP4-208ENST00000600628 CTTNBP2NLQ9P2B4 639 aa8.92□□□□□ -0.98
SSBP4-208ENST00000600628 SALL4Q9UJQ4 1053 aa8.92□□□□□ -0.98
SSBP4-208ENST00000600628 ZFR2Q9UPR6 939 aaKnown RBP8.92□□□□□ -0.98
SSBP4-208ENST00000600628 WASF3Q9UPY6 502 aa8.92□□□□□ -0.98
SSBP4-208ENST00000600628 DMTF1Q9Y222 760 aa8.92□□□□□ -0.98
SSBP4-208ENST00000600628 FARP1Q9Y4F1 1045 aaPredicted RBP8.92□□□□□ -0.98
SSBP4-208ENST00000600628 FADS3Q9Y5Q0 445 aa8.92□□□□□ -0.98
SSBP4-208ENST00000600628 ARHGAP42A6NI28 874 aa8.91□□□□□ -0.98
SSBP4-208ENST00000600628 BTNL10A8MVZ5 291 aa8.91□□□□□ -0.98
SSBP4-208ENST00000600628 TRAFD1O14545 582 aaPredicted RBP8.91□□□□□ -0.98
SSBP4-208ENST00000600628 BUB1O43683 1085 aa8.91□□□□□ -0.98
SSBP4-208ENST00000600628 RNGTTO60942 597 aaKnown RBP8.91□□□□□ -0.98
SSBP4-208ENST00000600628 CBFA2T3O75081 653 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms