RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 GPR37L1O60883 481 aa20.29■□□□□ 0.84
SHKBP1-222ENST00000600320 GABRG2P18507 467 aa20.29■□□□□ 0.84
SHKBP1-222ENST00000600320 CHRNA3P32297 505 aa20.29■□□□□ 0.84
SHKBP1-222ENST00000600320 CD68P34810 354 aaPredicted RBP20.29■□□□□ 0.84
SHKBP1-222ENST00000600320 HSPA9P38646 679 aaKnown RBP20.29■□□□□ 0.84
SHKBP1-222ENST00000600320 PAFAH1B1P43034 410 aa20.29■□□□□ 0.84
SHKBP1-222ENST00000600320 RECQLP46063 649 aaPredicted RBP20.29■□□□□ 0.84
SHKBP1-222ENST00000600320 CXCL12P48061 93 aa20.29■□□□□ 0.84
SHKBP1-222ENST00000600320 DGKEP52429 567 aa20.29■□□□□ 0.84
SHKBP1-222ENST00000600320 DSC2Q02487 901 aa20.29■□□□□ 0.84
SHKBP1-222ENST00000600320 ELAVL3Q14576 367 aaKnown RBP20.29■□□□□ 0.84
SHKBP1-222ENST00000600320 MYLK3Q32MK0 819 aa20.29■□□□□ 0.84
SHKBP1-222ENST00000600320 MAMSTRQ6ZN01 415 aa20.29■□□□□ 0.84
SHKBP1-222ENST00000600320 SRLQ86TD4 932 aa20.29■□□□□ 0.84
SHKBP1-222ENST00000600320 PRUNE1Q86TP1 453 aa20.29■□□□□ 0.84
SHKBP1-222ENST00000600320 CACUL1Q86Y37 369 aa20.29■□□□□ 0.84
SHKBP1-222ENST00000600320 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.29■□□□□ 0.84
SHKBP1-222ENST00000600320 C12orf50Q8NA57 414 aaPredicted RBP20.29■□□□□ 0.84
SHKBP1-222ENST00000600320 DTWD2Q8NBA8 298 aa20.29■□□□□ 0.84
SHKBP1-222ENST00000600320 ARRDC2Q8TBH0 407 aa20.29■□□□□ 0.84
SHKBP1-222ENST00000600320 CCDC110Q8TBZ0 833 aa20.29■□□□□ 0.84
SHKBP1-222ENST00000600320 OR8D1Q8WZ84 308 aa20.29■□□□□ 0.84
SHKBP1-222ENST00000600320 TEKT5Q96M29 485 aa20.29■□□□□ 0.84
SHKBP1-222ENST00000600320 RSPH9Q9H1X1 276 aaPredicted RBP20.29■□□□□ 0.84
SHKBP1-222ENST00000600320 KLHL8Q9P2G9 620 aaPredicted RBP20.29■□□□□ 0.84
SHKBP1-222ENST00000600320 ZNF148Q9UQR1 794 aa20.29■□□□□ 0.84
SHKBP1-222ENST00000600320 DRG1Q9Y295 367 aaKnown RBP20.29■□□□□ 0.84
SHKBP1-222ENST00000600320 TTLL3Q9Y4R7 772 aa20.29■□□□□ 0.84
SHKBP1-222ENST00000600320 CFAP69A5D8W1 941 aa20.28■□□□□ 0.84
SHKBP1-222ENST00000600320 PHF2O75151 1096 aa20.28■□□□□ 0.84
SHKBP1-222ENST00000600320 ITGAVP06756 1048 aa20.28■□□□□ 0.84
SHKBP1-222ENST00000600320 CSNK1DP48730 415 aa20.28■□□□□ 0.84
SHKBP1-222ENST00000600320 SCNN1BP51168 640 aa20.28■□□□□ 0.84
SHKBP1-222ENST00000600320 CCR3P51677 355 aa20.28■□□□□ 0.84
SHKBP1-222ENST00000600320 RPS14P62263 151 aaKnown RBP20.28■□□□□ 0.84
SHKBP1-222ENST00000600320 ITKQ08881 620 aa20.28■□□□□ 0.84
SHKBP1-222ENST00000600320 NSUN2Q08J23 767 aaKnown RBP eCLIP20.28■□□□□ 0.84
SHKBP1-222ENST00000600320 ALG1LQ6GMV1 187 aa20.28■□□□□ 0.84
SHKBP1-222ENST00000600320 NCEH1Q6PIU2 408 aa20.28■□□□□ 0.84
SHKBP1-222ENST00000600320 PID1Q7Z2X4 250 aa20.28■□□□□ 0.84
SHKBP1-222ENST00000600320 MMAAQ8IVH4 418 aaKnown RBP20.28■□□□□ 0.84
SHKBP1-222ENST00000600320 GLIS1Q8NBF1 620 aa20.28■□□□□ 0.84
SHKBP1-222ENST00000600320 TSTD1Q8NFU3 115 aa20.28■□□□□ 0.84
SHKBP1-222ENST00000600320 GRIN3AQ8TCU5 1115 aa20.28■□□□□ 0.84
SHKBP1-222ENST00000600320 CCDC114Q96M63 670 aa20.28■□□□□ 0.84
SHKBP1-222ENST00000600320 NUDCD1Q96RS6 583 aa20.28■□□□□ 0.84
SHKBP1-222ENST00000600320 SEMA3CQ99985 751 aa20.28■□□□□ 0.84
SHKBP1-222ENST00000600320 HEPHQ9BQS7 1158 aa20.28■□□□□ 0.84
SHKBP1-222ENST00000600320 ZDHHC6Q9H6R6 413 aa20.28■□□□□ 0.84
SHKBP1-222ENST00000600320 GLOD4Q9HC38 313 aa20.28■□□□□ 0.84
SHKBP1-222ENST00000600320 POLMQ9NP87 494 aaPredicted RBP20.28■□□□□ 0.84
SHKBP1-222ENST00000600320 HOMER3Q9NSC5 361 aa20.28■□□□□ 0.84
SHKBP1-222ENST00000600320 AMACRQ9UHK6 382 aa20.28■□□□□ 0.84
SHKBP1-222ENST00000600320 SARDHQ9UL12 918 aa20.28■□□□□ 0.84
SHKBP1-222ENST00000600320 PPM1HQ9ULR3 514 aa20.28■□□□□ 0.84
SHKBP1-222ENST00000600320 KMT2EQ8IZD2 1858 aa20.28■□□□□ 0.84
SHKBP1-222ENST00000600320 TRIOO75962 3097 aa20.28■□□□□ 0.84
SHKBP1-222ENST00000600320 GOLGA6L10A0A0M3HER8 536 aa20.27■□□□□ 0.84
SHKBP1-222ENST00000600320 PRR33A8MZF0 331 aa20.27■□□□□ 0.84
SHKBP1-222ENST00000600320 F5H423 210 aaPredicted RBP20.27■□□□□ 0.84
SHKBP1-222ENST00000600320 ALOX15BO15296 676 aa20.27■□□□□ 0.84
SHKBP1-222ENST00000600320 NEBLO76041 1014 aa20.27■□□□□ 0.84
SHKBP1-222ENST00000600320 PAPSS2O95340 614 aaPredicted RBP20.27■□□□□ 0.84
SHKBP1-222ENST00000600320 ETS1P14921 441 aa20.27■□□□□ 0.84
SHKBP1-222ENST00000600320 NDUFV2P19404 249 aa20.27■□□□□ 0.84
SHKBP1-222ENST00000600320 COILP38432 576 aaPredicted RBP20.27■□□□□ 0.84
SHKBP1-222ENST00000600320 METAP1P53582 386 aa20.27■□□□□ 0.84
SHKBP1-222ENST00000600320 ARSIQ5FYB1 569 aa20.27■□□□□ 0.84
SHKBP1-222ENST00000600320 TMEM31Q5JXX7 168 aa20.27■□□□□ 0.84
SHKBP1-222ENST00000600320 ANO7Q6IWH7 933 aa20.27■□□□□ 0.84
SHKBP1-222ENST00000600320 TSSK4Q6SA08 328 aa20.27■□□□□ 0.84
SHKBP1-222ENST00000600320 TMPRSS6Q8IU80 811 aa20.27■□□□□ 0.84
SHKBP1-222ENST00000600320 MAML2Q8IZL2 1156 aaPredicted RBP20.27■□□□□ 0.84
SHKBP1-222ENST00000600320 RTP4Q96DX8 246 aa20.27■□□□□ 0.84
SHKBP1-222ENST00000600320 MRGPRX1Q96LB2 322 aa20.27■□□□□ 0.84
SHKBP1-222ENST00000600320 SPATA13Q96N96 652 aa20.27■□□□□ 0.84
SHKBP1-222ENST00000600320 VAT1Q99536 393 aa20.27■□□□□ 0.84
SHKBP1-222ENST00000600320 POLR1EQ9GZS1 481 aaKnown RBP20.27■□□□□ 0.84
SHKBP1-222ENST00000600320 DDX47Q9H0S4 455 aaKnown RBP20.27■□□□□ 0.84
SHKBP1-222ENST00000600320 NOD2Q9HC29 1040 aa20.27■□□□□ 0.84
SHKBP1-222ENST00000600320 SCUBE2Q9NQ36 999 aa20.27■□□□□ 0.84
SHKBP1-222ENST00000600320 PRMT8Q9NR22 394 aaPredicted RBP20.27■□□□□ 0.84
SHKBP1-222ENST00000600320 IL36AQ9UHA7 158 aa20.27■□□□□ 0.84
SHKBP1-222ENST00000600320 ZDBF2Q9HCK1 2354 aa20.27■□□□□ 0.83
SHKBP1-222ENST00000600320 C5orf60A6NFR6 353 aa20.26■□□□□ 0.83
SHKBP1-222ENST00000600320 LEFTY1O75610 366 aa20.26■□□□□ 0.83
SHKBP1-222ENST00000600320 PIGNO95427 931 aa20.26■□□□□ 0.83
SHKBP1-222ENST00000600320 POP4O95707 220 aaKnown RBP20.26■□□□□ 0.83
SHKBP1-222ENST00000600320 MMP2P08253 660 aa20.26■□□□□ 0.83
SHKBP1-222ENST00000600320 ZSCAN5DPP0CG00 497 aa20.26■□□□□ 0.83
SHKBP1-222ENST00000600320 NFKB1P19838 968 aa20.26■□□□□ 0.83
SHKBP1-222ENST00000600320 PSMD8P48556 350 aa20.26■□□□□ 0.83
SHKBP1-222ENST00000600320 PXNP49023 591 aaPredicted RBP20.26■□□□□ 0.83
SHKBP1-222ENST00000600320 DMWDQ09019 674 aa20.26■□□□□ 0.83
SHKBP1-222ENST00000600320 POM121L1PQ3SYA9 428 aa20.26■□□□□ 0.83
SHKBP1-222ENST00000600320 ANKRD20A2Q5SQ80 823 aa20.26■□□□□ 0.83
SHKBP1-222ENST00000600320 ANKRD20A1Q5TYW2 823 aa20.26■□□□□ 0.83
SHKBP1-222ENST00000600320 ANKRD20A3Q5VUR7 823 aa20.26■□□□□ 0.83
SHKBP1-222ENST00000600320 ZNF776Q68DI1 518 aaPredicted RBP20.26■□□□□ 0.83
SHKBP1-222ENST00000600320 MDGA1Q8NFP4 955 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms