RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 OASLQ15646 514 aaKnown RBP15.24■□□□□ 0.03
TRIM28-207ENST00000597136 TTC27Q6P3X3 843 aa15.24■□□□□ 0.03
TRIM28-207ENST00000597136 LRRC49Q8IUZ0 686 aa15.24■□□□□ 0.03
TRIM28-207ENST00000597136 OR2T3Q8NH03 318 aa15.24■□□□□ 0.03
TRIM28-207ENST00000597136 LGMNQ99538 433 aa15.24■□□□□ 0.03
TRIM28-207ENST00000597136 DDX47Q9H0S4 455 aaKnown RBP15.24■□□□□ 0.03
TRIM28-207ENST00000597136 PDFQ9HBH1 243 aa15.24■□□□□ 0.03
TRIM28-207ENST00000597136 TDRD6O60522 2096 aaKnown RBP15.24■□□□□ 0.03
TRIM28-207ENST00000597136 CCDC163A0A0D9SF12 145 aa15.24■□□□□ 0.03
TRIM28-207ENST00000597136 ARHGAP42A6NI28 874 aa15.24■□□□□ 0.03
TRIM28-207ENST00000597136 HACD1B0YJ81 288 aa15.24■□□□□ 0.03
TRIM28-207ENST00000597136 H7C0C1 242 aa15.24■□□□□ 0.03
TRIM28-207ENST00000597136 CHRNA3P32297 505 aa15.24■□□□□ 0.03
TRIM28-207ENST00000597136 COILP38432 576 aaPredicted RBP15.24■□□□□ 0.03
TRIM28-207ENST00000597136 GARSP41250 739 aaKnown RBP15.24■□□□□ 0.03
TRIM28-207ENST00000597136 ATP5OP48047 213 aa15.24■□□□□ 0.03
TRIM28-207ENST00000597136 KCNJ1P48048 391 aa15.24■□□□□ 0.03
TRIM28-207ENST00000597136 FNTAP49354 379 aa15.24■□□□□ 0.03
TRIM28-207ENST00000597136 METAP1P53582 386 aa15.24■□□□□ 0.03
TRIM28-207ENST00000597136 RPS14P62263 151 aaKnown RBP15.24■□□□□ 0.03
TRIM28-207ENST00000597136 NHLH1Q02575 133 aa15.24■□□□□ 0.03
TRIM28-207ENST00000597136 SLC20A2Q08357 652 aa15.24■□□□□ 0.03
TRIM28-207ENST00000597136 CYTH1Q15438 398 aa15.24■□□□□ 0.03
TRIM28-207ENST00000597136 FAM182AQ5T1J6 154 aa15.24■□□□□ 0.03
TRIM28-207ENST00000597136 C22orf39Q6P5X5 142 aa15.24■□□□□ 0.03
TRIM28-207ENST00000597136 KIAA1324Q6UXG2 1013 aaKnown RBP15.24■□□□□ 0.03
TRIM28-207ENST00000597136 B4GALNT4Q76KP1 1039 aa15.24■□□□□ 0.03
TRIM28-207ENST00000597136 KLHL7Q8IXQ5 586 aa15.24■□□□□ 0.03
TRIM28-207ENST00000597136 CHST14Q8NCH0 376 aa15.24■□□□□ 0.03
TRIM28-207ENST00000597136 LRRN4CLQ8ND94 238 aa15.24■□□□□ 0.03
TRIM28-207ENST00000597136 BRD8Q9H0E9 1235 aa15.24■□□□□ 0.03
TRIM28-207ENST00000597136 RSPH9Q9H1X1 276 aaPredicted RBP15.24■□□□□ 0.03
TRIM28-207ENST00000597136 C10orf88Q9H8K7 445 aa15.24■□□□□ 0.03
TRIM28-207ENST00000597136 IPO11Q9UI26 975 aaKnown RBP15.24■□□□□ 0.03
TRIM28-207ENST00000597136 SARDHQ9UL12 918 aa15.24■□□□□ 0.03
TRIM28-207ENST00000597136 DRG1Q9Y295 367 aaKnown RBP15.24■□□□□ 0.03
TRIM28-207ENST00000597136 CACNA1EQ15878 2313 aa15.23■□□□□ 0.03
TRIM28-207ENST00000597136 RIOK3O14730 519 aaKnown RBP15.23■□□□□ 0.03
TRIM28-207ENST00000597136 PPP1R12AO14974 1030 aaPredicted RBP15.23■□□□□ 0.03
TRIM28-207ENST00000597136 PRAMEF11O60813 436 aa15.23■□□□□ 0.03
TRIM28-207ENST00000597136 ITGAVP06756 1048 aa15.23■□□□□ 0.03
TRIM28-207ENST00000597136 PPIDQ08752 370 aaKnown RBP15.23■□□□□ 0.03
TRIM28-207ENST00000597136 PRKD1Q15139 912 aaPredicted RBP15.23■□□□□ 0.03
TRIM28-207ENST00000597136 MAP7D1Q3KQU3 841 aa15.23■□□□□ 0.03
TRIM28-207ENST00000597136 SLC45A4Q5BKX6 768 aa15.23■□□□□ 0.03
TRIM28-207ENST00000597136 DARS2Q6PI48 645 aaKnown RBP15.23■□□□□ 0.03
TRIM28-207ENST00000597136 CCDC137Q6PK04 289 aaKnown RBP15.23■□□□□ 0.03
TRIM28-207ENST00000597136 MMAAQ8IVH4 418 aaKnown RBP15.23■□□□□ 0.03
TRIM28-207ENST00000597136 CCNYQ8ND76 341 aa15.23■□□□□ 0.03
TRIM28-207ENST00000597136 OR2A12Q8NGT7 310 aa15.23■□□□□ 0.03
TRIM28-207ENST00000597136 ATL2Q8NHH9 583 aa15.23■□□□□ 0.03
TRIM28-207ENST00000597136 TFB1MQ8WVM0 346 aaKnown RBP15.23■□□□□ 0.03
TRIM28-207ENST00000597136 HDAC11Q96DB2 347 aa15.23■□□□□ 0.03
TRIM28-207ENST00000597136 SIPA1Q96FS4 1042 aa15.23■□□□□ 0.03
TRIM28-207ENST00000597136 TSGA13Q96PP4 275 aa15.23■□□□□ 0.03
TRIM28-207ENST00000597136 QKIQ96PU8 341 aaKnown RBP eCLIP15.23■□□□□ 0.03
TRIM28-207ENST00000597136 KRT12Q99456 494 aa15.23■□□□□ 0.03
TRIM28-207ENST00000597136 TM6SF2Q9BZW4 377 aa15.23■□□□□ 0.03
TRIM28-207ENST00000597136 PCYOX1Q9UHG3 505 aa15.23■□□□□ 0.03
TRIM28-207ENST00000597136 ZNF148Q9UQR1 794 aa15.23■□□□□ 0.03
TRIM28-207ENST00000597136 PCDHGA2Q9Y5H1 932 aa15.23■□□□□ 0.03
TRIM28-207ENST00000597136 BCLAF3A2AJT9 711 aaKnown RBP15.22■□□□□ 0.03
TRIM28-207ENST00000597136 MAFKO60675 156 aa15.22■□□□□ 0.03
TRIM28-207ENST00000597136 TMCC1O94876 653 aa15.22■□□□□ 0.03
TRIM28-207ENST00000597136 SLU7O95391 586 aaKnown RBP15.22■□□□□ 0.03
TRIM28-207ENST00000597136 CTSLP07711 333 aa15.22■□□□□ 0.03
TRIM28-207ENST00000597136 BCKDHBP21953 392 aa15.22■□□□□ 0.03
TRIM28-207ENST00000597136 GKP32189 559 aa15.22■□□□□ 0.03
TRIM28-207ENST00000597136 DPY19L3Q6ZPD9 716 aa15.22■□□□□ 0.03
TRIM28-207ENST00000597136 CDKL3Q8IVW4 592 aaPredicted RBP15.22■□□□□ 0.03
TRIM28-207ENST00000597136 MMGT1Q8N4V1 131 aa15.22■□□□□ 0.03
TRIM28-207ENST00000597136 ATPAF2Q8N5M1 289 aa15.22■□□□□ 0.03
TRIM28-207ENST00000597136 NOA1Q8NC60 698 aaKnown RBP15.22■□□□□ 0.03
TRIM28-207ENST00000597136 VOPP1Q96AW1 172 aa15.22■□□□□ 0.03
TRIM28-207ENST00000597136 TMEM121Q9BTD3 319 aa15.22■□□□□ 0.03
TRIM28-207ENST00000597136 USP29Q9HBJ7 922 aa15.22■□□□□ 0.03
TRIM28-207ENST00000597136 ITM2CQ9NQX7 267 aa15.22■□□□□ 0.03
TRIM28-207ENST00000597136 MBD1Q9UIS9 605 aaPredicted RBP15.22■□□□□ 0.03
TRIM28-207ENST00000597136 CYP8B1Q9UNU6 501 aa15.22■□□□□ 0.03
TRIM28-207ENST00000597136 ZSCAN5CA6NGD5 496 aaPredicted RBP15.21■□□□□ 0.03
TRIM28-207ENST00000597136 PLK4O00444 970 aa15.21■□□□□ 0.03
TRIM28-207ENST00000597136 RPP40O75818 363 aaKnown RBP15.21■□□□□ 0.03
TRIM28-207ENST00000597136 PEX11BO96011 259 aa15.21■□□□□ 0.03
TRIM28-207ENST00000597136 CCNCP24863 283 aa15.21■□□□□ 0.03
TRIM28-207ENST00000597136 RBL1P28749 1068 aa15.21■□□□□ 0.03
TRIM28-207ENST00000597136 P2RY2P41231 377 aa15.21■□□□□ 0.03
TRIM28-207ENST00000597136 CLCN6P51797 869 aa15.21■□□□□ 0.03
TRIM28-207ENST00000597136 ZNF33AQ06730 810 aa15.21■□□□□ 0.03
TRIM28-207ENST00000597136 IL10RBQ08334 325 aa15.21■□□□□ 0.03
TRIM28-207ENST00000597136 AP1B1Q10567 949 aa15.21■□□□□ 0.03
TRIM28-207ENST00000597136 LPAL2Q16609 132 aa15.21■□□□□ 0.03
TRIM28-207ENST00000597136 POM121L1PQ3SYA9 428 aa15.21■□□□□ 0.03
TRIM28-207ENST00000597136 ATXN7L2Q5T6C5 722 aaPredicted RBP15.21■□□□□ 0.03
TRIM28-207ENST00000597136 OR6K2Q8NGY2 324 aa15.21■□□□□ 0.03
TRIM28-207ENST00000597136 GAB3Q8WWW8 586 aa15.21■□□□□ 0.03
TRIM28-207ENST00000597136 PRCCQ92733 491 aaPredicted RBP15.21■□□□□ 0.03
TRIM28-207ENST00000597136 RUNDC3BQ96NL0 473 aa15.21■□□□□ 0.03
TRIM28-207ENST00000597136 LHX3Q9UBR4 397 aa15.21■□□□□ 0.03
TRIM28-207ENST00000597136 UBA2Q9UBT2 640 aaPredicted RBP15.21■□□□□ 0.03
TRIM28-207ENST00000597136 AMACRQ9UHK6 382 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms