RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 ADH1BP00325 375 aa19.6■□□□□ 0.73
PNKP-207ENST00000596014 PRNPP04156 253 aa19.6■□□□□ 0.73
PNKP-207ENST00000596014 P2RY2P41231 377 aa19.6■□□□□ 0.73
PNKP-207ENST00000596014 TPMTP51580 245 aa19.6■□□□□ 0.73
PNKP-207ENST00000596014 RENBPP51606 427 aa19.6■□□□□ 0.73
PNKP-207ENST00000596014 BYSLQ13895 437 aaKnown RBP19.6■□□□□ 0.73
PNKP-207ENST00000596014 ARSIQ5FYB1 569 aa19.6■□□□□ 0.73
PNKP-207ENST00000596014 CCDC181Q5TID7 509 aa19.6■□□□□ 0.73
PNKP-207ENST00000596014 FAM46CQ5VWP2 391 aa19.6■□□□□ 0.73
PNKP-207ENST00000596014 ZC3H14Q6PJT7 736 aaKnown RBP19.6■□□□□ 0.73
PNKP-207ENST00000596014 FAM160A2Q8N612 972 aaPredicted RBP19.6■□□□□ 0.73
PNKP-207ENST00000596014 TEX26Q8N6G2 289 aa19.6■□□□□ 0.73
PNKP-207ENST00000596014 TMIEQ8NEW7 156 aa19.6■□□□□ 0.73
PNKP-207ENST00000596014 PIP4K2CQ8TBX8 421 aa19.6■□□□□ 0.73
PNKP-207ENST00000596014 GRIN3AQ8TCU5 1115 aa19.6■□□□□ 0.73
PNKP-207ENST00000596014 GAB3Q8WWW8 586 aa19.6■□□□□ 0.73
PNKP-207ENST00000596014 MAML1Q92585 1016 aa19.6■□□□□ 0.73
PNKP-207ENST00000596014 BRD8Q9H0E9 1235 aa19.6■□□□□ 0.73
PNKP-207ENST00000596014 PABPC3Q9H361 631 aaKnown RBP19.6■□□□□ 0.73
PNKP-207ENST00000596014 CYP8B1Q9UNU6 501 aa19.6■□□□□ 0.73
PNKP-207ENST00000596014 WDR87Q6ZQQ6 2873 aa19.6■□□□□ 0.73
PNKP-207ENST00000596014 KRIT1O00522 736 aa19.59■□□□□ 0.73
PNKP-207ENST00000596014 ENC1O14682 589 aa19.59■□□□□ 0.73
PNKP-207ENST00000596014 MUSKO15146 869 aa19.59■□□□□ 0.73
PNKP-207ENST00000596014 RPP40O75818 363 aaKnown RBP19.59■□□□□ 0.73
PNKP-207ENST00000596014 CCNB1P14635 433 aa19.59■□□□□ 0.73
PNKP-207ENST00000596014 C5AR1P21730 350 aa19.59■□□□□ 0.73
PNKP-207ENST00000596014 GKP32189 559 aa19.59■□□□□ 0.73
PNKP-207ENST00000596014 RGRP47804 291 aa19.59■□□□□ 0.73
PNKP-207ENST00000596014 NSUN2Q08J23 767 aaKnown RBP eCLIP19.59■□□□□ 0.73
PNKP-207ENST00000596014 AP1B1Q10567 949 aa19.59■□□□□ 0.73
PNKP-207ENST00000596014 ZNF235Q14590 738 aa19.59■□□□□ 0.73
PNKP-207ENST00000596014 TTC31Q49AM3 519 aaPredicted RBP19.59■□□□□ 0.73
PNKP-207ENST00000596014 SLC35F6Q8N357 371 aa19.59■□□□□ 0.73
PNKP-207ENST00000596014 BBS5Q8N3I7 341 aa19.59■□□□□ 0.73
PNKP-207ENST00000596014 VOPP1Q96AW1 172 aa19.59■□□□□ 0.73
PNKP-207ENST00000596014 ZNF419Q96HQ0 510 aaPredicted RBP19.59■□□□□ 0.73
PNKP-207ENST00000596014 EVLQ9UI08 416 aaPredicted RBP19.59■□□□□ 0.73
PNKP-207ENST00000596014 C1QTNF3-AMACRE9PGA6 284 aa19.59■□□□□ 0.73
PNKP-207ENST00000596014 RNF103O00237 685 aa19.59■□□□□ 0.73
PNKP-207ENST00000596014 INSIG1O15503 277 aa19.59■□□□□ 0.73
PNKP-207ENST00000596014 LEFTY1O75610 366 aa19.59■□□□□ 0.73
PNKP-207ENST00000596014 IGLV3-19P01714 112 aa19.59■□□□□ 0.73
PNKP-207ENST00000596014 MMP13P45452 471 aa19.59■□□□□ 0.73
PNKP-207ENST00000596014 CSNK1DP48730 415 aa19.59■□□□□ 0.73
PNKP-207ENST00000596014 METAP1P53582 386 aa19.59■□□□□ 0.73
PNKP-207ENST00000596014 KLF1Q13351 362 aaPredicted RBP19.59■□□□□ 0.73
PNKP-207ENST00000596014 SEL1L2Q5TEA6 688 aa19.59■□□□□ 0.73
PNKP-207ENST00000596014 B4GALNT4Q76KP1 1039 aa19.59■□□□□ 0.73
PNKP-207ENST00000596014 PGBD5Q8N414 524 aa19.59■□□□□ 0.73
PNKP-207ENST00000596014 ACTL9Q8TC94 416 aa19.59■□□□□ 0.73
PNKP-207ENST00000596014 LRIG1Q96JA1 1093 aa19.59■□□□□ 0.73
PNKP-207ENST00000596014 ZDHHC6Q9H6R6 413 aa19.59■□□□□ 0.73
PNKP-207ENST00000596014 L2HGDHQ9H9P8 463 aa19.59■□□□□ 0.73
PNKP-207ENST00000596014 FBXL12Q9NXK8 326 aa19.59■□□□□ 0.73
PNKP-207ENST00000596014 ANKRD36A6QL64 1941 aa19.58■□□□□ 0.73
PNKP-207ENST00000596014 IGHV1OR15-9A0A0B4J2B8 117 aa19.58■□□□□ 0.72
PNKP-207ENST00000596014 KCNK1O00180 336 aa19.58■□□□□ 0.72
PNKP-207ENST00000596014 KPNA3O00505 521 aaPredicted RBP19.58■□□□□ 0.72
PNKP-207ENST00000596014 FANCGO15287 622 aa19.58■□□□□ 0.72
PNKP-207ENST00000596014 HSPA9P38646 679 aaKnown RBP19.58■□□□□ 0.72
PNKP-207ENST00000596014 GNG11P61952 73 aa19.58■□□□□ 0.72
PNKP-207ENST00000596014 OTUD4Q01804 1114 aaKnown RBP19.58■□□□□ 0.72
PNKP-207ENST00000596014 RAD51Q06609 339 aa19.58■□□□□ 0.72
PNKP-207ENST00000596014 PRKD1Q15139 912 aaPredicted RBP19.58■□□□□ 0.72
PNKP-207ENST00000596014 POM121L1PQ3SYA9 428 aa19.58■□□□□ 0.72
PNKP-207ENST00000596014 USP30Q70CQ3 517 aa19.58■□□□□ 0.72
PNKP-207ENST00000596014 SRLQ86TD4 932 aa19.58■□□□□ 0.72
PNKP-207ENST00000596014 ZC3H18Q86VM9 953 aaKnown RBP19.58■□□□□ 0.72
PNKP-207ENST00000596014 AADATQ8N5Z0 425 aa19.58■□□□□ 0.72
PNKP-207ENST00000596014 TFB1MQ8WVM0 346 aaKnown RBP19.58■□□□□ 0.72
PNKP-207ENST00000596014 SPACA7Q96KW9 195 aa19.58■□□□□ 0.72
PNKP-207ENST00000596014 OMDQ99983 421 aa19.58■□□□□ 0.72
PNKP-207ENST00000596014 FAM86C1Q9NVL1 165 aa19.58■□□□□ 0.72
PNKP-207ENST00000596014 RBM22Q9NW64 420 aaKnown RBP eCLIP19.58■□□□□ 0.724e-6■■■□□ 16.3
PNKP-207ENST00000596014 MBD1Q9UIS9 605 aaPredicted RBP19.58■□□□□ 0.72
PNKP-207ENST00000596014 THADAQ6YHU6 1953 aa19.57■□□□□ 0.72
PNKP-207ENST00000596014 GON4LQ3T8J9 2241 aa19.57■□□□□ 0.72
PNKP-207ENST00000596014 CEP192Q8TEP8 1941 aa19.57■□□□□ 0.72
PNKP-207ENST00000596014 A0A1W2PP55 124 aa19.57■□□□□ 0.72
PNKP-207ENST00000596014 TCRBV7S2A1N4TA0A589 114 aa19.57■□□□□ 0.72
PNKP-207ENST00000596014 OXTRP30559 389 aa19.57■□□□□ 0.72
PNKP-207ENST00000596014 SFSWAPQ12872 951 aaKnown RBP19.57■□□□□ 0.72
PNKP-207ENST00000596014 XRCC4Q13426 336 aa19.57■□□□□ 0.72
PNKP-207ENST00000596014 NOMO1Q15155 1222 aa19.57■□□□□ 0.72
PNKP-207ENST00000596014 HDDC3Q8N4P3 179 aa19.57■□□□□ 0.72
PNKP-207ENST00000596014 GANCQ8TET4 914 aa19.57■□□□□ 0.72
PNKP-207ENST00000596014 MGME1Q9BQP7 344 aa19.57■□□□□ 0.72
PNKP-207ENST00000596014 CPEB1Q9BZB8 566 aaKnown RBP19.57■□□□□ 0.72
PNKP-207ENST00000596014 NT5MQ9NPB1 228 aa19.57■□□□□ 0.72
PNKP-207ENST00000596014 SERGEFQ9UGK8 458 aa19.57■□□□□ 0.72
PNKP-207ENST00000596014 NCKAP1Q9Y2A7 1128 aa19.57■□□□□ 0.72
PNKP-207ENST00000596014 RNASEH2AO75792 299 aaKnown RBP19.56■□□□□ 0.72
PNKP-207ENST00000596014 JCHAINP01591 159 aa19.56■□□□□ 0.72
PNKP-207ENST00000596014 CR2P20023 1033 aa19.56■□□□□ 0.72
PNKP-207ENST00000596014 CXCR5P32302 372 aa19.56■□□□□ 0.72
PNKP-207ENST00000596014 DRD3P35462 400 aa19.56■□□□□ 0.72
PNKP-207ENST00000596014 SCNN1BP51168 640 aa19.56■□□□□ 0.72
PNKP-207ENST00000596014 MAXP61244 160 aa19.56■□□□□ 0.72
PNKP-207ENST00000596014 IFI35P80217 286 aaPredicted RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms