RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 SLC17A9Q9BYT1 436 aa15.02■□□□□ -0
PNKP-202ENST00000593706 OSBPL2Q9H1P3 480 aa15.02■□□□□ -0
PNKP-202ENST00000593706 USP29Q9HBJ7 922 aa15.02■□□□□ -0
PNKP-202ENST00000593706 IPO11Q9UI26 975 aaKnown RBP15.02■□□□□ -0
PNKP-202ENST00000593706 WASF2Q9Y6W5 498 aa15.02■□□□□ -0
PNKP-202ENST00000593706 IGLV3-10A0A075B6K4 115 aa15.01□□□□□ -0.01
PNKP-202ENST00000593706 ILVBLA1L0T0 632 aa15.01□□□□□ -0.01
PNKP-202ENST00000593706 POM121BA6NF01 834 aa15.01□□□□□ -0.01
PNKP-202ENST00000593706 DRGXA6NNA5 263 aa15.01□□□□□ -0.01
PNKP-202ENST00000593706 K7ESM1 405 aa15.01□□□□□ -0.01
PNKP-202ENST00000593706 PES1O00541 588 aaKnown RBP15.01□□□□□ -0.01
PNKP-202ENST00000593706 PAK4O96013 591 aaPredicted RBP15.01□□□□□ -0.01
PNKP-202ENST00000593706 GIMD1P0DJR0 217 aa15.01□□□□□ -0.01
PNKP-202ENST00000593706 RABIFP47224 123 aa15.01□□□□□ -0.01
PNKP-202ENST00000593706 GABRB2P47870 512 aa15.01□□□□□ -0.01
PNKP-202ENST00000593706 CCNHP51946 323 aaPredicted RBP15.01□□□□□ -0.01
PNKP-202ENST00000593706 CDCP2Q5VXM1 449 aa15.01□□□□□ -0.01
PNKP-202ENST00000593706 ZCCHC8Q6NZY4 707 aaKnown RBP15.01□□□□□ -0.01
PNKP-202ENST00000593706 ZNF783Q6ZMS7 281 aa15.01□□□□□ -0.01
PNKP-202ENST00000593706 DRC7Q8IY82 874 aa15.01□□□□□ -0.01
PNKP-202ENST00000593706 RYBPQ8N488 228 aaPredicted RBP15.01□□□□□ -0.01
PNKP-202ENST00000593706 MSANTD4Q8NCY6 345 aa15.01□□□□□ -0.01
PNKP-202ENST00000593706 KCNE4Q8WWG9 221 aa15.01□□□□□ -0.01
PNKP-202ENST00000593706 NT5C3BQ969T7 300 aa15.01□□□□□ -0.01
PNKP-202ENST00000593706 C18orf8Q96DM3 657 aa15.01□□□□□ -0.01
PNKP-202ENST00000593706 FEM1CQ96JP0 617 aa15.01□□□□□ -0.01
PNKP-202ENST00000593706 C1orf74Q96LT6 269 aa15.01□□□□□ -0.01
PNKP-202ENST00000593706 BPIFA3Q9BQP9 254 aa15.01□□□□□ -0.01
PNKP-202ENST00000593706 HEPHQ9BQS7 1158 aa15.01□□□□□ -0.01
PNKP-202ENST00000593706 ZYG11BQ9C0D3 744 aa15.01□□□□□ -0.01
PNKP-202ENST00000593706 CEP44Q9C0F1 390 aa15.01□□□□□ -0.01
PNKP-202ENST00000593706 POLR1BQ9H9Y6 1135 aa15.01□□□□□ -0.01
PNKP-202ENST00000593706 FAM207AQ9NSI2 230 aaPredicted RBP15.01□□□□□ -0.01
PNKP-202ENST00000593706 TMEM51Q9NW97 253 aa15.01□□□□□ -0.01
PNKP-202ENST00000593706 FCF1Q9Y324 198 aaKnown RBP15.01□□□□□ -0.01
PNKP-202ENST00000593706 SCN8AQ9UQD0 1980 aa15.01□□□□□ -0.01
PNKP-202ENST00000593706 MYO18BQ8IUG5 2567 aa15□□□□□ -0.01
PNKP-202ENST00000593706 UNC13CQ8NB66 2214 aa15□□□□□ -0.01
PNKP-202ENST00000593706 GOLGA8SH3BPF8 625 aa15□□□□□ -0.01
PNKP-202ENST00000593706 NEMP1O14524 444 aa15□□□□□ -0.01
PNKP-202ENST00000593706 FPGTO14772 594 aa15□□□□□ -0.01
PNKP-202ENST00000593706 LSM8O95777 96 aaKnown RBP15□□□□□ -0.01
PNKP-202ENST00000593706 ATP1A3P13637 1013 aa15□□□□□ -0.01
PNKP-202ENST00000593706 NME1P15531 152 aaKnown RBP15□□□□□ -0.01
PNKP-202ENST00000593706 L1CAMP32004 1257 aa15□□□□□ -0.01
PNKP-202ENST00000593706 FLT3P36888 993 aa15□□□□□ -0.01
PNKP-202ENST00000593706 SCNN1AP37088 669 aa15□□□□□ -0.01
PNKP-202ENST00000593706 UCNP55089 124 aa15□□□□□ -0.01
PNKP-202ENST00000593706 GNA12Q03113 381 aa15□□□□□ -0.01
PNKP-202ENST00000593706 SGCGQ13326 291 aa15□□□□□ -0.01
PNKP-202ENST00000593706 PDE1CQ14123 709 aaPredicted RBP15□□□□□ -0.01
PNKP-202ENST00000593706 FZD2Q14332 565 aa15□□□□□ -0.01
PNKP-202ENST00000593706 SYCP1Q15431 976 aa15□□□□□ -0.01
PNKP-202ENST00000593706 CDKN3Q16667 212 aa15□□□□□ -0.01
PNKP-202ENST00000593706 TAF1BQ53T94 588 aaPredicted RBP15□□□□□ -0.01
PNKP-202ENST00000593706 CARD16Q5EG05 197 aa15□□□□□ -0.01
PNKP-202ENST00000593706 C3orf38Q5JPI3 329 aa15□□□□□ -0.01
PNKP-202ENST00000593706 TAF3Q5VWG9 929 aa15□□□□□ -0.01
PNKP-202ENST00000593706 PARS2Q7L3T8 475 aaKnown RBP15□□□□□ -0.01
PNKP-202ENST00000593706 ZNF605Q86T29 641 aa15□□□□□ -0.01
PNKP-202ENST00000593706 FAM131BQ86XD5 332 aa15□□□□□ -0.01
PNKP-202ENST00000593706 XYLT1Q86Y38 959 aa15□□□□□ -0.01
PNKP-202ENST00000593706 FAM181AQ8N9Y4 354 aa15□□□□□ -0.01
PNKP-202ENST00000593706 BMFQ96LC9 184 aa15□□□□□ -0.01
PNKP-202ENST00000593706 ERGIC2Q96RQ1 377 aa15□□□□□ -0.01
PNKP-202ENST00000593706 FUCA2Q9BTY2 467 aa15□□□□□ -0.01
PNKP-202ENST00000593706 TM6SF2Q9BZW4 377 aa15□□□□□ -0.01
PNKP-202ENST00000593706 THSD1Q9NS62 852 aa15□□□□□ -0.01
PNKP-202ENST00000593706 NCKIPSDQ9NZQ3 722 aa15□□□□□ -0.01
PNKP-202ENST00000593706 DAAM1Q9Y4D1 1078 aa15□□□□□ -0.01
PNKP-202ENST00000593706 FADS3Q9Y5Q0 445 aa15□□□□□ -0.01
PNKP-202ENST00000593706 HS3ST3A1Q9Y663 406 aa15□□□□□ -0.01
PNKP-202ENST00000593706 LY6G6EA0A0G2JKS1 128 aa14.99□□□□□ -0.01
PNKP-202ENST00000593706 SPTY2D1-AS1A0A0U1RR47 76 aa14.99□□□□□ -0.01
PNKP-202ENST00000593706 CPED1A4D0V7 1026 aa14.99□□□□□ -0.01
PNKP-202ENST00000593706 ERVH48-1M5A8F1 160 aa14.99□□□□□ -0.01
PNKP-202ENST00000593706 RAD51BO15315 384 aa14.99□□□□□ -0.01
PNKP-202ENST00000593706 AQP9O43315 295 aa14.99□□□□□ -0.01
PNKP-202ENST00000593706 AP1G1O43747 822 aa14.99□□□□□ -0.01
PNKP-202ENST00000593706 CSF2P04141 144 aa14.99□□□□□ -0.01
PNKP-202ENST00000593706 MMEP08473 750 aa14.99□□□□□ -0.01
PNKP-202ENST00000593706 CHRNB2P17787 502 aa14.99□□□□□ -0.01
PNKP-202ENST00000593706 LSSP48449 732 aa14.99□□□□□ -0.01
PNKP-202ENST00000593706 ERVPABLB-1P60509 514 aa14.99□□□□□ -0.01
PNKP-202ENST00000593706 POLR2FP61218 127 aaKnown RBP14.99□□□□□ -0.01
PNKP-202ENST00000593706 NOMO3P69849 1222 aa14.99□□□□□ -0.01
PNKP-202ENST00000593706 ARF5P84085 180 aa14.99□□□□□ -0.01
PNKP-202ENST00000593706 SLC20A2Q08357 652 aa14.99□□□□□ -0.01
PNKP-202ENST00000593706 FGL2Q14314 439 aa14.99□□□□□ -0.01
PNKP-202ENST00000593706 DEFB133Q30KQ1 61 aa14.99□□□□□ -0.01
PNKP-202ENST00000593706 C2CD6Q53TS8 623 aa14.99□□□□□ -0.01
PNKP-202ENST00000593706 ZSCAN30Q86W11 494 aa14.99□□□□□ -0.01
PNKP-202ENST00000593706 ZNF843Q8N446 348 aa14.99□□□□□ -0.01
PNKP-202ENST00000593706 AOPEPQ8N6M6 819 aa14.99□□□□□ -0.01
PNKP-202ENST00000593706 OR6K2Q8NGY2 324 aa14.99□□□□□ -0.01
PNKP-202ENST00000593706 SLC20A1Q8WUM9 679 aa14.99□□□□□ -0.01
PNKP-202ENST00000593706 HIC2Q96JB3 615 aa14.99□□□□□ -0.01
PNKP-202ENST00000593706 CFAP57Q96MR6 1250 aa14.99□□□□□ -0.01
PNKP-202ENST00000593706 HAPLN3Q96S86 360 aa14.99□□□□□ -0.01
PNKP-202ENST00000593706 CPNE5Q9HCH3 593 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms