RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 ACADVLP49748 655 aa13.46□□□□□ -0.25
H3F3B-213ENST00000593254 ZNF143P52747 638 aaPredicted RBP13.46□□□□□ -0.25
H3F3B-213ENST00000593254 TAS2R38P59533 333 aa13.46□□□□□ -0.25
H3F3B-213ENST00000593254 DNAJC3Q13217 504 aa13.46□□□□□ -0.25
H3F3B-213ENST00000593254 HES3Q5TGS1 186 aa13.46□□□□□ -0.25
H3F3B-213ENST00000593254 NAPEPLDQ6IQ20 393 aa13.46□□□□□ -0.25
H3F3B-213ENST00000593254 RWDD4Q6NW29 188 aaKnown RBP13.46□□□□□ -0.25
H3F3B-213ENST00000593254 CAVIN1Q6NZI2 390 aaKnown RBP13.46□□□□□ -0.25
H3F3B-213ENST00000593254 DNAJC24Q6P3W2 148 aa13.46□□□□□ -0.25
H3F3B-213ENST00000593254 FBXL19Q6PCT2 694 aa13.46□□□□□ -0.25
H3F3B-213ENST00000593254 DPY19L3Q6ZPD9 716 aa13.46□□□□□ -0.25
H3F3B-213ENST00000593254 PRPF39Q86UA1 669 aaKnown RBP13.46□□□□□ -0.25
H3F3B-213ENST00000593254 MCOLN2Q8IZK6 566 aa13.46□□□□□ -0.25
H3F3B-213ENST00000593254 PCDH20Q8N6Y1 951 aaKnown RBP13.46□□□□□ -0.25
H3F3B-213ENST00000593254 CHST14Q8NCH0 376 aa13.46□□□□□ -0.25
H3F3B-213ENST00000593254 TSC1Q92574 1164 aa13.46□□□□□ -0.25
H3F3B-213ENST00000593254 FGF11Q92914 225 aa13.46□□□□□ -0.25
H3F3B-213ENST00000593254 ARRDC3Q96B67 414 aa13.46□□□□□ -0.25
H3F3B-213ENST00000593254 TBC1D31Q96DN5 1066 aa13.46□□□□□ -0.25
H3F3B-213ENST00000593254 MAGEB5Q9BZ81 275 aa13.46□□□□□ -0.25
H3F3B-213ENST00000593254 CEP44Q9C0F1 390 aa13.46□□□□□ -0.25
H3F3B-213ENST00000593254 PREBQ9HCU5 417 aa13.46□□□□□ -0.25
H3F3B-213ENST00000593254 DMTF1Q9Y222 760 aa13.46□□□□□ -0.25
H3F3B-213ENST00000593254 WASF2Q9Y6W5 498 aa13.46□□□□□ -0.25
H3F3B-213ENST00000593254 TDRD6O60522 2096 aaKnown RBP13.46□□□□□ -0.26
H3F3B-213ENST00000593254 UBR5O95071 2799 aaPredicted RBP13.45□□□□□ -0.26
H3F3B-213ENST00000593254 RNF103O00237 685 aa13.45□□□□□ -0.26
H3F3B-213ENST00000593254 CCP110O43303 1012 aa13.45□□□□□ -0.26
H3F3B-213ENST00000593254 LDOC1O95751 146 aaPredicted RBP13.45□□□□□ -0.26
H3F3B-213ENST00000593254 MAT2AP31153 395 aaKnown RBP13.45□□□□□ -0.26
H3F3B-213ENST00000593254 ACVRL1P37023 503 aa13.45□□□□□ -0.26
H3F3B-213ENST00000593254 RECQLP46063 649 aaPredicted RBP13.45□□□□□ -0.26
H3F3B-213ENST00000593254 ZNF165P49910 485 aa13.45□□□□□ -0.26
H3F3B-213ENST00000593254 RPL7AP62424 266 aaKnown RBP13.45□□□□□ -0.26
H3F3B-213ENST00000593254 CCDC15Q0P6D6 951 aa13.45□□□□□ -0.26
H3F3B-213ENST00000593254 SHBQ15464 509 aa13.45□□□□□ -0.26
H3F3B-213ENST00000593254 ACAD10Q6JQN1 1059 aa13.45□□□□□ -0.26
H3F3B-213ENST00000593254 SLFN11Q7Z7L1 901 aa13.45□□□□□ -0.26
H3F3B-213ENST00000593254 GATAD2AQ86YP4 633 aa13.45□□□□□ -0.26
H3F3B-213ENST00000593254 CACTIN-AS1Q8N1I8 211 aa13.45□□□□□ -0.26
H3F3B-213ENST00000593254 GRIN3AQ8TCU5 1115 aa13.45□□□□□ -0.26
H3F3B-213ENST00000593254 SAP25Q8TEE9 199 aa13.45□□□□□ -0.26
H3F3B-213ENST00000593254 ARHGEF2Q92974 986 aaKnown RBP13.45□□□□□ -0.26
H3F3B-213ENST00000593254 WBP1Q96G27 269 aa13.45□□□□□ -0.26
H3F3B-213ENST00000593254 CNDP2Q96KP4 475 aaKnown RBP13.45□□□□□ -0.26
H3F3B-213ENST00000593254 MCEEQ96PE7 176 aa13.45□□□□□ -0.26
H3F3B-213ENST00000593254 ELF4Q99607 663 aaPredicted RBP13.45□□□□□ -0.26
H3F3B-213ENST00000593254 FUCA2Q9BTY2 467 aa13.45□□□□□ -0.26
H3F3B-213ENST00000593254 MAGEH1Q9H213 219 aa13.45□□□□□ -0.26
H3F3B-213ENST00000593254 TNKS2Q9H2K2 1166 aa13.45□□□□□ -0.26
H3F3B-213ENST00000593254 IL36AQ9UHA7 158 aa13.45□□□□□ -0.26
H3F3B-213ENST00000593254 DNAI1Q9UI46 699 aa13.45□□□□□ -0.26
H3F3B-213ENST00000593254 NBPF19A0A087WUL8 3843 aa13.44□□□□□ -0.26
H3F3B-213ENST00000593254 A0A1B0GTH6 734 aa13.44□□□□□ -0.26
H3F3B-213ENST00000593254 A0A1W2PQC6 194 aa13.44□□□□□ -0.26
H3F3B-213ENST00000593254 ANKRD62A6NC57 917 aa13.44□□□□□ -0.26
H3F3B-213ENST00000593254 LRRC53A6NM62 1247 aa13.44□□□□□ -0.26
H3F3B-213ENST00000593254 TLR4O00206 839 aa13.44□□□□□ -0.26
H3F3B-213ENST00000593254 BRINP1O60477 761 aa13.44□□□□□ -0.26
H3F3B-213ENST00000593254 LEFTY1O75610 366 aa13.44□□□□□ -0.26
H3F3B-213ENST00000593254 L1CAMP32004 1257 aa13.44□□□□□ -0.26
H3F3B-213ENST00000593254 NXPH1P58417 271 aa13.44□□□□□ -0.26
H3F3B-213ENST00000593254 OVGP1Q12889 678 aa13.44□□□□□ -0.26
H3F3B-213ENST00000593254 IQCB1Q15051 598 aa13.44□□□□□ -0.26
H3F3B-213ENST00000593254 FILIP1LQ4L180 1135 aa13.44□□□□□ -0.26
H3F3B-213ENST00000593254 SETMARQ53H47 684 aaPredicted RBP13.44□□□□□ -0.26
H3F3B-213ENST00000593254 SLC45A4Q5BKX6 768 aa13.44□□□□□ -0.26
H3F3B-213ENST00000593254 ARSIQ5FYB1 569 aa13.44□□□□□ -0.26
H3F3B-213ENST00000593254 PRAMEF14Q5SWL7 426 aa13.44□□□□□ -0.26
H3F3B-213ENST00000593254 PPP1R2P3Q6NXS1 205 aa13.44□□□□□ -0.26
H3F3B-213ENST00000593254 NEK5Q6P3R8 708 aa13.44□□□□□ -0.26
H3F3B-213ENST00000593254 ERN2Q76MJ5 926 aaKnown RBP13.44□□□□□ -0.26
H3F3B-213ENST00000593254 IQCHQ86VS3 1027 aa13.44□□□□□ -0.26
H3F3B-213ENST00000593254 SPACA3Q8IXA5 215 aa13.44□□□□□ -0.26
H3F3B-213ENST00000593254 PLPP6Q8IY26 295 aa13.44□□□□□ -0.26
H3F3B-213ENST00000593254 PYROXD2Q8N2H3 581 aa13.44□□□□□ -0.26
H3F3B-213ENST00000593254 MFSD2AQ8NA29 543 aa13.44□□□□□ -0.26
H3F3B-213ENST00000593254 ISG20Q96AZ6 181 aaKnown RBP13.44□□□□□ -0.26
H3F3B-213ENST00000593254 VCPIP1Q96JH7 1222 aa13.44□□□□□ -0.26
H3F3B-213ENST00000593254 CNPY3Q9BT09 278 aa13.44□□□□□ -0.26
H3F3B-213ENST00000593254 HDAC8Q9BY41 377 aa13.44□□□□□ -0.26
H3F3B-213ENST00000593254 DYRK4Q9NR20 520 aa13.44□□□□□ -0.26
H3F3B-213ENST00000593254 GDF3Q9NR23 364 aa13.44□□□□□ -0.26
H3F3B-213ENST00000593254 TAS2R14Q9NYV8 317 aa13.44□□□□□ -0.26
H3F3B-213ENST00000593254 FCF1Q9Y324 198 aaKnown RBP13.44□□□□□ -0.26
H3F3B-213ENST00000593254 ACTL7AQ9Y615 435 aa13.44□□□□□ -0.26
H3F3B-213ENST00000593254 YKT6O15498 198 aa13.43□□□□□ -0.26
H3F3B-213ENST00000593254 RAMP2O60895 175 aa13.43□□□□□ -0.26
H3F3B-213ENST00000593254 RNGTTO60942 597 aaKnown RBP13.43□□□□□ -0.26
H3F3B-213ENST00000593254 TNFAIP3P21580 790 aa13.43□□□□□ -0.26
H3F3B-213ENST00000593254 ITGB7P26010 798 aa13.43□□□□□ -0.26
H3F3B-213ENST00000593254 CCNHP51946 323 aaPredicted RBP13.43□□□□□ -0.26
H3F3B-213ENST00000593254 AIF1P55008 147 aa13.43□□□□□ -0.26
H3F3B-213ENST00000593254 GEMIN4P57678 1058 aaKnown RBP13.43□□□□□ -0.26
H3F3B-213ENST00000593254 CXADRP78310 365 aa13.43□□□□□ -0.26
H3F3B-213ENST00000593254 OGDHQ02218 1023 aa13.43□□□□□ -0.26
H3F3B-213ENST00000593254 TBC1D25Q3MII6 688 aa13.43□□□□□ -0.26
H3F3B-213ENST00000593254 CARD16Q5EG05 197 aa13.43□□□□□ -0.26
H3F3B-213ENST00000593254 EFHC2Q5JST6 749 aa13.43□□□□□ -0.26
H3F3B-213ENST00000593254 E4F1Q66K89 784 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms