RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 COX16Q9P0S2 106 aa18.2■□□□□ 0.5
SPC24-206ENST00000592540 CD300AQ9UGN4 299 aa18.2■□□□□ 0.5
SPC24-206ENST00000592540 A0A087WXM4 84 aa18.19■□□□□ 0.5
SPC24-206ENST00000592540 TRIM64CA6NLI5 447 aa18.19■□□□□ 0.5
SPC24-206ENST00000592540 EEF2KO00418 725 aaKnown RBP18.19■□□□□ 0.5
SPC24-206ENST00000592540 SOCS2O14508 198 aa18.19■□□□□ 0.5
SPC24-206ENST00000592540 DCLK1O15075 740 aa18.19■□□□□ 0.5
SPC24-206ENST00000592540 COL6A2P12110 1019 aa18.19■□□□□ 0.5
SPC24-206ENST00000592540 HDCP19113 662 aa18.19■□□□□ 0.5
SPC24-206ENST00000592540 ESRRGP62508 458 aa18.19■□□□□ 0.5
SPC24-206ENST00000592540 CTBSQ01459 385 aa18.19■□□□□ 0.5
SPC24-206ENST00000592540 CBX3Q13185 183 aa18.19■□□□□ 0.5
SPC24-206ENST00000592540 MAPRE2Q15555 327 aa18.19■□□□□ 0.5
SPC24-206ENST00000592540 KCTD21Q4G0X4 260 aa18.19■□□□□ 0.5
SPC24-206ENST00000592540 C6orf10Q5SRN2 563 aa18.19■□□□□ 0.5
SPC24-206ENST00000592540 OTUD1Q5VV17 481 aaPredicted RBP18.19■□□□□ 0.5
SPC24-206ENST00000592540 SLC41A1Q8IVJ1 513 aa18.19■□□□□ 0.5
SPC24-206ENST00000592540 ANKFN1Q8N957 763 aa18.19■□□□□ 0.5
SPC24-206ENST00000592540 ZBTB8BQ8NAP8 495 aaPredicted RBP18.19■□□□□ 0.5
SPC24-206ENST00000592540 NDRG1Q92597 394 aaKnown RBP18.19■□□□□ 0.5
SPC24-206ENST00000592540 C12orf43Q96C57 262 aaKnown RBP18.19■□□□□ 0.5
SPC24-206ENST00000592540 OMDQ99983 421 aa18.19■□□□□ 0.5
SPC24-206ENST00000592540 LRRC4Q9HBW1 653 aa18.19■□□□□ 0.5
SPC24-206ENST00000592540 ANLNQ9NQW6 1124 aa18.19■□□□□ 0.5
SPC24-206ENST00000592540 BLOC1S6Q9UL45 172 aa18.19■□□□□ 0.5
SPC24-206ENST00000592540 ERI2A8K979 691 aaKnown RBP18.18■□□□□ 0.5
SPC24-206ENST00000592540 HBP1O60381 514 aa18.18■□□□□ 0.5
SPC24-206ENST00000592540 TIPRLO75663 272 aa18.18■□□□□ 0.5
SPC24-206ENST00000592540 C22orf31O95567 290 aa18.18■□□□□ 0.5
SPC24-206ENST00000592540 GABRB3P28472 473 aa18.18■□□□□ 0.5
SPC24-206ENST00000592540 CD68P34810 354 aaPredicted RBP18.18■□□□□ 0.5
SPC24-206ENST00000592540 CD97P48960 835 aa18.18■□□□□ 0.5
SPC24-206ENST00000592540 IGBP1P78318 339 aa18.18■□□□□ 0.5
SPC24-206ENST00000592540 PRAMEP78395 509 aa18.18■□□□□ 0.5
SPC24-206ENST00000592540 PRKCQQ04759 706 aa18.18■□□□□ 0.5
SPC24-206ENST00000592540 UNC93AQ86WB7 457 aa18.18■□□□□ 0.5
SPC24-206ENST00000592540 SPPL2BQ8TCT7 592 aa18.18■□□□□ 0.5
SPC24-206ENST00000592540 NXNL1Q96CM4 212 aa18.18■□□□□ 0.5
SPC24-206ENST00000592540 GPR78Q96P69 363 aa18.18■□□□□ 0.5
SPC24-206ENST00000592540 FTHL17Q9BXU8 183 aa18.18■□□□□ 0.5
SPC24-206ENST00000592540 CXCL16Q9H2A7 254 aa18.18■□□□□ 0.5
SPC24-206ENST00000592540 NSMCE4AQ9NXX6 385 aa18.18■□□□□ 0.5
SPC24-206ENST00000592540 GTSE1Q9NYZ3 720 aa18.18■□□□□ 0.5
SPC24-206ENST00000592540 HACL1Q9UJ83 578 aa18.18■□□□□ 0.5
SPC24-206ENST00000592540 ACOT9Q9Y305 439 aa18.18■□□□□ 0.5
SPC24-206ENST00000592540 ZNF701M0R085 212 aaPredicted RBP18.18■□□□□ 0.5
SPC24-206ENST00000592540 CYP2C9P11712 490 aa18.18■□□□□ 0.5
SPC24-206ENST00000592540 VARSP26640 1264 aaKnown RBP18.18■□□□□ 0.5
SPC24-206ENST00000592540 POU5F1BQ06416 359 aa18.18■□□□□ 0.5
SPC24-206ENST00000592540 FASTKQ14296 549 aaKnown RBP18.18■□□□□ 0.5
SPC24-206ENST00000592540 ZNF460Q14592 562 aa18.18■□□□□ 0.5
SPC24-206ENST00000592540 AGKQ53H12 422 aa18.18■□□□□ 0.5
SPC24-206ENST00000592540 DCAF6Q58WW2 860 aa18.18■□□□□ 0.5
SPC24-206ENST00000592540 CNSTQ6PJW8 725 aa18.18■□□□□ 0.5
SPC24-206ENST00000592540 FAM149B1Q96BN6 582 aa18.18■□□□□ 0.5
SPC24-206ENST00000592540 SPATA33Q96N06 139 aa18.18■□□□□ 0.5
SPC24-206ENST00000592540 GBA3Q9H227 469 aa18.18■□□□□ 0.5
SPC24-206ENST00000592540 NCKIPSDQ9NZQ3 722 aa18.18■□□□□ 0.5
SPC24-206ENST00000592540 ZNF711Q9Y462 761 aa18.18■□□□□ 0.5
SPC24-206ENST00000592540 PCDHGA4Q9Y5G9 962 aa18.18■□□□□ 0.5
SPC24-206ENST00000592540 CCDC78A2IDD5 438 aa18.17■□□□□ 0.5
SPC24-206ENST00000592540 PSMD12O00232 456 aaPredicted RBP18.17■□□□□ 0.5
SPC24-206ENST00000592540 APBA3O96018 575 aa18.17■□□□□ 0.5
SPC24-206ENST00000592540 PGK1P00558 417 aa18.17■□□□□ 0.5
SPC24-206ENST00000592540 AHSGP02765 367 aa18.17■□□□□ 0.5
SPC24-206ENST00000592540 BMP2P12643 396 aa18.17■□□□□ 0.5
SPC24-206ENST00000592540 ARSAP15289 507 aa18.17■□□□□ 0.5
SPC24-206ENST00000592540 DNAJB1P25685 340 aa18.17■□□□□ 0.5
SPC24-206ENST00000592540 ACADSBP45954 432 aa18.17■□□□□ 0.5
SPC24-206ENST00000592540 PPIL2Q13356 520 aa18.17■□□□□ 0.5
SPC24-206ENST00000592540 SQLEQ14534 574 aa18.17■□□□□ 0.5
SPC24-206ENST00000592540 SPATA6LQ8N4H0 392 aa18.17■□□□□ 0.5
SPC24-206ENST00000592540 DCUN1D5Q9BTE7 237 aa18.17■□□□□ 0.5
SPC24-206ENST00000592540 UNKQ9C0B0 810 aaKnown RBP18.17■□□□□ 0.5
SPC24-206ENST00000592540 SMARCAD1Q9H4L7 1026 aa18.17■□□□□ 0.5
SPC24-206ENST00000592540 QTRT2Q9H974 415 aaKnown RBP18.17■□□□□ 0.5
SPC24-206ENST00000592540 CCDC167Q9P0B6 97 aa18.17■□□□□ 0.5
SPC24-206ENST00000592540 FIS1Q9Y3D6 152 aa18.17■□□□□ 0.5
SPC24-206ENST00000592540 ZNF839A8K0R7 811 aa18.17■□□□□ 0.5
SPC24-206ENST00000592540 BOLA2-SMG1P6H3BVE0 249 aa18.17■□□□□ 0.5
SPC24-206ENST00000592540 SUPT3HO75486 399 aa18.17■□□□□ 0.5
SPC24-206ENST00000592540 FAM163BP0C2L3 166 aa18.17■□□□□ 0.5
SPC24-206ENST00000592540 ZNF280AP59817 542 aaPredicted RBP18.17■□□□□ 0.5
SPC24-206ENST00000592540 ANKDD1AQ495B1 522 aa18.17■□□□□ 0.5
SPC24-206ENST00000592540 SLC44A4Q53GD3 710 aa18.17■□□□□ 0.5
SPC24-206ENST00000592540 PIWIL4Q7Z3Z4 852 aaKnown RBP18.17■□□□□ 0.5
SPC24-206ENST00000592540 CEP97Q8IW35 865 aa18.17■□□□□ 0.5
SPC24-206ENST00000592540 ZNF786Q8N393 782 aa18.17■□□□□ 0.5
SPC24-206ENST00000592540 TXNDC5Q8NBS9 432 aaKnown RBP18.17■□□□□ 0.5
SPC24-206ENST00000592540 ADAMTS16Q8TE57 1224 aa18.17■□□□□ 0.5
SPC24-206ENST00000592540 GIPC3Q8TF64 312 aa18.17■□□□□ 0.5
SPC24-206ENST00000592540 HIPK3Q9H422 1215 aa18.17■□□□□ 0.5
SPC24-206ENST00000592540 TMEM181Q9P2C4 612 aa18.17■□□□□ 0.5
SPC24-206ENST00000592540 PTBP2Q9UKA9 531 aaKnown RBP18.17■□□□□ 0.5
SPC24-206ENST00000592540 CDH7Q9ULB5 785 aa18.17■□□□□ 0.5
SPC24-206ENST00000592540 UBDO15205 165 aa18.16■□□□□ 0.5
SPC24-206ENST00000592540 AKAP10O43572 662 aa18.16■□□□□ 0.5
SPC24-206ENST00000592540 GNAO1P09471 354 aa18.16■□□□□ 0.5
SPC24-206ENST00000592540 HNRNPLP14866 589 aaKnown RBP eCLIP18.16■□□□□ 0.5
SPC24-206ENST00000592540 SLC26A2P50443 739 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms