RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 SASH3O75995 380 aa13.46□□□□□ -0.25
SMARCA4-216ENST00000591545 PDE9AO76083 593 aa13.46□□□□□ -0.25
SMARCA4-216ENST00000591545 ACLYP53396 1101 aa13.46□□□□□ -0.25
SMARCA4-216ENST00000591545 TSNQ15631 228 aaKnown RBP13.46□□□□□ -0.25
SMARCA4-216ENST00000591545 MFSD7Q6UXD7 560 aa13.46□□□□□ -0.25
SMARCA4-216ENST00000591545 CDK20Q8IZL9 346 aa13.46□□□□□ -0.25
SMARCA4-216ENST00000591545 ZNF614Q8N883 585 aa13.46□□□□□ -0.25
SMARCA4-216ENST00000591545 DEC1Q9P2X7 70 aa13.46□□□□□ -0.25
SMARCA4-216ENST00000591545 SMIM28A0A1B0GU29 152 aa13.46□□□□□ -0.26
SMARCA4-216ENST00000591545 SCAMP3O14828 347 aaKnown RBP13.46□□□□□ -0.26
SMARCA4-216ENST00000591545 INPP4BO15327 924 aa13.46□□□□□ -0.26
SMARCA4-216ENST00000591545 CENPAP49450 140 aa13.46□□□□□ -0.26
SMARCA4-216ENST00000591545 DRG2P55039 364 aaKnown RBP13.46□□□□□ -0.26
SMARCA4-216ENST00000591545 ZNF697Q5TEC3 545 aa13.46□□□□□ -0.26
SMARCA4-216ENST00000591545 TTC27Q6P3X3 843 aa13.46□□□□□ -0.26
SMARCA4-216ENST00000591545 SH3BP5LQ7L8J4 393 aa13.46□□□□□ -0.26
SMARCA4-216ENST00000591545 SNX32Q86XE0 403 aa13.46□□□□□ -0.26
SMARCA4-216ENST00000591545 MAB21L3Q8N8X9 362 aa13.46□□□□□ -0.26
SMARCA4-216ENST00000591545 REPS1Q96D71 796 aa13.46□□□□□ -0.26
SMARCA4-216ENST00000591545 MLPHQ9BV36 600 aaPredicted RBP13.46□□□□□ -0.26
SMARCA4-216ENST00000591545 HMG20AQ9NP66 347 aa13.46□□□□□ -0.26
SMARCA4-216ENST00000591545 PCYOX1Q9UHG3 505 aa13.46□□□□□ -0.26
SMARCA4-216ENST00000591545 WDR27A2RRH5 827 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 SPATA31D3P0C874 917 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 C21orf59P57076 290 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 ZACNQ401N2 412 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 CASP12Q6UXS9 341 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 SPATA31D4Q6ZUB0 917 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 CLVS1Q8IUQ0 354 aaPredicted RBP13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 TMEM132CQ8N3T6 1108 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 SPATA20Q8TB22 786 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 MED8Q96G25 268 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 NIFKQ9BYG3 293 aaKnown RBP13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 CERS4Q9HA82 394 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 SOWAHBA6NEL2 793 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 SNX3O60493 162 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 CATP04040 527 aaKnown RBP13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 TPH1P17752 444 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 GUCA1AP43080 201 aaPredicted RBP13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 PWP1Q13610 501 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 SHROOM1Q2M3G4 852 aaPredicted RBP13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 SDHAF4Q5VUM1 108 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 AADATQ8N5Z0 425 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 C10orf53Q8N6V4 93 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 ZNF655Q8N720 491 aaPredicted RBP13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 ACOX2Q99424 681 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 MIEF1Q9NQG6 463 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 RBPJLQ9UBG7 517 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 SETD1AO15047 1707 aaKnown RBP13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 H7C0S8 307 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 ZBTB14O43829 449 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 EOMESO95936 686 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 MGAT1P26572 445 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 GPR1P46091 355 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 FAAP100Q0VG06 881 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 FAM126BQ8IXS8 530 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 FIG4Q92562 907 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 ERLEC1Q96DZ1 483 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 C1orf50Q9BV19 199 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 DUSP16Q9BY84 665 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 TRIM8Q9BZR9 551 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 PAIP1Q9H074 479 aaKnown RBP13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 A0A087X0B3 334 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 CLTBP09497 229 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 SSTR1P30872 391 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 NEK3P51956 506 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 DLG4P78352 724 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 TLE2Q04725 743 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 DCTN2Q13561 401 aaKnown RBP13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 TAB1Q15750 504 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 NAIF1Q69YI7 327 aaPredicted RBP13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 FAM228AQ86W67 206 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 HDAC7Q8WUI4 952 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 PADI4Q9UM07 663 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 SIK3Q9Y2K2 1263 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 NCANO14594 1321 aa13.45□□□□□ -0.26
SMARCA4-216ENST00000591545 FAM25AB3EWG3 89 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 FAM25CB3EWG5 89 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 FAM25GB3EWG6 89 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 SMNDC1O75940 238 aaKnown RBP eCLIP13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 CCNE2O96020 404 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 SPATA31C1P0DKV0 1188 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 RPL14P50914 215 aaKnown RBP13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 CASP5P51878 434 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 ZNF143P52747 638 aaPredicted RBP13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 CYP2A13Q16696 494 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 SPANXN2Q5MJ10 180 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 TCHHL1Q5QJ38 904 aaPredicted RBP13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 PDZK1Q5T2W1 519 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 FUT10Q6P4F1 479 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 FAM183BPQ6ZVS7 135 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 CAMK1DQ8IU85 385 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 DNAJC19Q96DA6 116 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 CXorf40BQ96DE9 158 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 KIAA1522Q9P206 1035 aaPredicted RBP13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 AFDNP55196 1824 aaKnown RBP13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 LMO7Q8WWI1 1683 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 SYN3O14994 580 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 TRIM25Q14258 630 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms