RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 CASKIN2Q8WXE0 1202 aa22.71■■□□□ 1.23
MBD3-208ENST00000590830 ZDHHC5Q9C0B5 715 aa22.71■■□□□ 1.23
MBD3-208ENST00000590830 DONSONQ9NYP3 566 aa22.71■■□□□ 1.23
MBD3-208ENST00000590830 LHX3Q9UBR4 397 aa22.71■■□□□ 1.23
MBD3-208ENST00000590830 ANKRD6Q9Y2G4 727 aa22.71■■□□□ 1.23
MBD3-208ENST00000590830 SNX11Q9Y5W9 270 aa22.71■■□□□ 1.23
MBD3-208ENST00000590830 SPTBN2O15020 2390 aa22.71■■□□□ 1.23
MBD3-208ENST00000590830 GIPC1O14908 333 aa22.7■■□□□ 1.22
MBD3-208ENST00000590830 INSIG1O15503 277 aa22.7■■□□□ 1.22
MBD3-208ENST00000590830 KCNK5O95279 499 aa22.7■■□□□ 1.22
MBD3-208ENST00000590830 POP4O95707 220 aaKnown RBP22.7■■□□□ 1.22
MBD3-208ENST00000590830 CD48P09326 243 aa22.7■■□□□ 1.22
MBD3-208ENST00000590830 CD59P13987 128 aa22.7■■□□□ 1.22
MBD3-208ENST00000590830 ITGB7P26010 798 aa22.7■■□□□ 1.22
MBD3-208ENST00000590830 MAT2AP31153 395 aaKnown RBP22.7■■□□□ 1.22
MBD3-208ENST00000590830 GRIA4P48058 902 aa22.7■■□□□ 1.22
MBD3-208ENST00000590830 SNRPD1P62314 119 aaKnown RBP22.7■■□□□ 1.22
MBD3-208ENST00000590830 RACK1P63244 317 aaKnown RBP22.7■■□□□ 1.22
MBD3-208ENST00000590830 HLA-BQ31612 363 aa22.7■■□□□ 1.22
MBD3-208ENST00000590830 PIP4P1Q86T03 277 aa22.7■■□□□ 1.22
MBD3-208ENST00000590830 SLC35G2Q8TBE7 412 aa22.7■■□□□ 1.22
MBD3-208ENST00000590830 FAM71BQ8TC56 605 aa22.7■■□□□ 1.22
MBD3-208ENST00000590830 UBA2Q9UBT2 640 aaPredicted RBP22.7■■□□□ 1.22
MBD3-208ENST00000590830 CNOT1A5YKK6 2376 aaKnown RBP22.69■■□□□ 1.22
MBD3-208ENST00000590830 ASCC3Q8N3C0 2202 aaKnown RBP22.69■■□□□ 1.22
MBD3-208ENST00000590830 A0A1W2PR77 199 aa22.69■■□□□ 1.22
MBD3-208ENST00000590830 ARHGAP42A6NI28 874 aa22.69■■□□□ 1.22
MBD3-208ENST00000590830 KRIT1O00522 736 aa22.69■■□□□ 1.22
MBD3-208ENST00000590830 KCNK3O14649 394 aa22.69■■□□□ 1.22
MBD3-208ENST00000590830 OPHN1O60890 802 aa22.69■■□□□ 1.22
MBD3-208ENST00000590830 RNGTTO60942 597 aaKnown RBP22.69■■□□□ 1.22
MBD3-208ENST00000590830 SSR1P43307 286 aaKnown RBP22.69■■□□□ 1.22
MBD3-208ENST00000590830 MMRN1Q13201 1228 aa22.69■■□□□ 1.22
MBD3-208ENST00000590830 PARS2Q7L3T8 475 aaKnown RBP22.69■■□□□ 1.22
MBD3-208ENST00000590830 TRIM69Q86WT6 500 aa22.69■■□□□ 1.22
MBD3-208ENST00000590830 GAREM1Q9H706 876 aa22.69■■□□□ 1.22
MBD3-208ENST00000590830 PREBQ9HCU5 417 aa22.69■■□□□ 1.22
MBD3-208ENST00000590830 DYRK4Q9NR20 520 aa22.69■■□□□ 1.22
MBD3-208ENST00000590830 ZFR2Q9UPR6 939 aaKnown RBP22.69■■□□□ 1.22
MBD3-208ENST00000590830 A0A1W2PQU0 124 aa22.68■■□□□ 1.22
MBD3-208ENST00000590830 C16orf96A6NNT2 1141 aa22.68■■□□□ 1.22
MBD3-208ENST00000590830 DFFAO00273 331 aa22.68■■□□□ 1.22
MBD3-208ENST00000590830 ARL4AP40617 200 aa22.68■■□□□ 1.22
MBD3-208ENST00000590830 RHOAP61586 193 aa22.68■■□□□ 1.22
MBD3-208ENST00000590830 TEAD4Q15561 434 aa22.68■■□□□ 1.22
MBD3-208ENST00000590830 PRPF39Q86UA1 669 aaKnown RBP22.68■■□□□ 1.22
MBD3-208ENST00000590830 KLK6Q92876 244 aa22.68■■□□□ 1.22
MBD3-208ENST00000590830 MRFAP1L1Q96HT8 127 aa22.68■■□□□ 1.22
MBD3-208ENST00000590830 PPP1R16AQ96I34 528 aa22.68■■□□□ 1.22
MBD3-208ENST00000590830 LRIG1Q96JA1 1093 aa22.68■■□□□ 1.22
MBD3-208ENST00000590830 SERAC1Q96JX3 654 aa22.68■■□□□ 1.22
MBD3-208ENST00000590830 EXOC2Q96KP1 924 aa22.68■■□□□ 1.22
MBD3-208ENST00000590830 FNDC3AQ9Y2H6 1198 aaKnown RBP22.68■■□□□ 1.22
MBD3-208ENST00000590830 FADS3Q9Y5Q0 445 aa22.68■■□□□ 1.22
MBD3-208ENST00000590830 KNL1Q8NG31 2342 aa22.68■■□□□ 1.22
MBD3-208ENST00000590830 UPK3BL1B0FP48 263 aa22.67■■□□□ 1.22
MBD3-208ENST00000590830 UPK3BL2E5RIL1 263 aa22.67■■□□□ 1.22
MBD3-208ENST00000590830 VILLO15195 856 aa22.67■■□□□ 1.22
MBD3-208ENST00000590830 UGT2B4P06133 528 aa22.67■■□□□ 1.22
MBD3-208ENST00000590830 ADRB3P13945 408 aa22.67■■□□□ 1.22
MBD3-208ENST00000590830 CSRP1P21291 193 aaKnown RBP22.67■■□□□ 1.22
MBD3-208ENST00000590830 ABL2P42684 1182 aa22.67■■□□□ 1.22
MBD3-208ENST00000590830 CTSKP43235 329 aa22.67■■□□□ 1.22
MBD3-208ENST00000590830 RGRP47804 291 aa22.67■■□□□ 1.22
MBD3-208ENST00000590830 NEK3P51956 506 aa22.67■■□□□ 1.22
MBD3-208ENST00000590830 CDH6P55285 790 aa22.67■■□□□ 1.22
MBD3-208ENST00000590830 FOXK2Q01167 660 aa22.67■■□□□ 1.22
MBD3-208ENST00000590830 HADHQ16836 314 aaKnown RBP22.67■■□□□ 1.22
MBD3-208ENST00000590830 ZNF284Q2VY69 593 aa22.67■■□□□ 1.22
MBD3-208ENST00000590830 ZNF805Q5CZA5 627 aa22.67■■□□□ 1.22
MBD3-208ENST00000590830 PSAPL1Q6NUJ1 521 aa22.67■■□□□ 1.22
MBD3-208ENST00000590830 NEK5Q6P3R8 708 aa22.67■■□□□ 1.22
MBD3-208ENST00000590830 LZTR1Q8N653 840 aa22.67■■□□□ 1.22
MBD3-208ENST00000590830 DEFB124Q8NES8 71 aa22.67■■□□□ 1.22
MBD3-208ENST00000590830 GDAP1L1Q96MZ0 367 aa22.67■■□□□ 1.22
MBD3-208ENST00000590830 KLHL32Q96NJ5 620 aa22.67■■□□□ 1.22
MBD3-208ENST00000590830 TPX2Q9ULW0 747 aaKnown RBP22.67■■□□□ 1.22
MBD3-208ENST00000590830 NCOR2Q9Y618 2525 aa22.67■■□□□ 1.22
MBD3-208ENST00000590830 TMEM110-MUSTN1A8MSY1 372 aa22.66■■□□□ 1.22
MBD3-208ENST00000590830 SPINT1O43278 529 aa22.66■■□□□ 1.22
MBD3-208ENST00000590830 MTA2O94776 668 aa22.66■■□□□ 1.22
MBD3-208ENST00000590830 IGSF6O95976 241 aa22.66■■□□□ 1.22
MBD3-208ENST00000590830 KCNA4P22459 653 aa22.66■■□□□ 1.22
MBD3-208ENST00000590830 CD38P28907 300 aa22.66■■□□□ 1.22
MBD3-208ENST00000590830 CCDC15Q0P6D6 951 aa22.66■■□□□ 1.22
MBD3-208ENST00000590830 DPYSL3Q14195 570 aa22.66■■□□□ 1.22
MBD3-208ENST00000590830 KRT81Q14533 505 aa22.66■■□□□ 1.22
MBD3-208ENST00000590830 MESDQ14696 234 aa22.66■■□□□ 1.22
MBD3-208ENST00000590830 N4BP2L1Q5TBK1 243 aaPredicted RBP22.66■■□□□ 1.22
MBD3-208ENST00000590830 SEL1L3Q68CR1 1132 aa22.66■■□□□ 1.22
MBD3-208ENST00000590830 FBXL19Q6PCT2 694 aa22.66■■□□□ 1.22
MBD3-208ENST00000590830 IL27RAQ6UWB1 636 aa22.66■■□□□ 1.22
MBD3-208ENST00000590830 GDPD4Q6W3E5 623 aa22.66■■□□□ 1.22
MBD3-208ENST00000590830 HORMAD1Q86X24 394 aa22.66■■□□□ 1.22
MBD3-208ENST00000590830 TSEN2Q8NCE0 465 aaKnown RBP22.66■■□□□ 1.22
MBD3-208ENST00000590830 AASDHPPTQ9NRN7 309 aa22.66■■□□□ 1.22
MBD3-208ENST00000590830 IPO11Q9UI26 975 aaKnown RBP22.66■■□□□ 1.22
MBD3-208ENST00000590830 CA5BQ9Y2D0 317 aa22.66■■□□□ 1.22
MBD3-208ENST00000590830 PLXNA2O75051 1894 aa22.66■■□□□ 1.22
MBD3-208ENST00000590830 BUB1BO60566 1050 aaPredicted RBP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms