RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 PLAG1Q6DJT9 500 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 FCRL6Q6DN72 434 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 SLC24A5Q71RS6 500 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 OTUD6AQ7L8S5 288 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 LRRTM4Q86VH4 590 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 XYLT1Q86Y38 959 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 GATAD2AQ86YP4 633 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 RHPN2Q8IUC4 686 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 COLGALT2Q8IYK4 626 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 ADSSL1Q8N142 457 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 LRRC43Q8N309 656 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 FBXO15Q8NCQ5 510 aaPredicted RBP8.19□□□□□ -1.1
ATG4D-210ENST00000588972 SIMC1Q8NDZ2 872 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 LRRC15Q8TF66 581 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 CCDC43Q96MW1 224 aaKnown RBP8.19□□□□□ -1.1
ATG4D-210ENST00000588972 PPP1R9BQ96SB3 815 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 ADAM2Q99965 735 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 CPEB1Q9BZB8 566 aaKnown RBP8.19□□□□□ -1.1
ATG4D-210ENST00000588972 RAB34Q9BZG1 259 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 IMPG2Q9BZV3 1241 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 EPC1Q9H2F5 836 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 POMKQ9H5K3 350 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 DHX33Q9H6R0 707 aaKnown RBP8.19□□□□□ -1.1
ATG4D-210ENST00000588972 CWH43Q9H720 699 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 ERVK-5Q9HDB9 667 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 RGS18Q9NS28 235 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 ANKEF1Q9NU02 776 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 DDX19AQ9NUU7 478 aaKnown RBP8.19□□□□□ -1.1
ATG4D-210ENST00000588972 TMEM161AQ9NX61 479 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 KIF17Q9P2E2 1029 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 SUCLA2Q9P2R7 463 aaPredicted RBP8.19□□□□□ -1.1
ATG4D-210ENST00000588972 HESX1Q9UBX0 185 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 CDH22Q9UJ99 828 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 FBXO2Q9UK22 296 aaPredicted RBP8.19□□□□□ -1.1
ATG4D-210ENST00000588972 OTOGLQ3ZCN5 2332 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 DENND4AQ7Z401 1863 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 TCHHQ07283 1943 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 H7C4K7 107 aa8.18□□□□□ -1.1
ATG4D-210ENST00000588972 MATN2O00339 956 aa8.18□□□□□ -1.1
ATG4D-210ENST00000588972 FAM155BO75949 473 aa8.18□□□□□ -1.1
ATG4D-210ENST00000588972 ITGA2BP08514 1039 aa8.18□□□□□ -1.1
ATG4D-210ENST00000588972 NPPBP16860 134 aa8.18□□□□□ -1.1
ATG4D-210ENST00000588972 SLC6A2P23975 617 aa8.18□□□□□ -1.1
ATG4D-210ENST00000588972 TMOD1P28289 359 aa8.18□□□□□ -1.1
ATG4D-210ENST00000588972 ANP32AP39687 249 aaKnown RBP8.18□□□□□ -1.1
ATG4D-210ENST00000588972 VIPR2P41587 438 aa8.18□□□□□ -1.1
ATG4D-210ENST00000588972 MTHFRP42898 656 aa8.18□□□□□ -1.1
ATG4D-210ENST00000588972 KRT17Q04695 432 aa8.18□□□□□ -1.1
ATG4D-210ENST00000588972 RIN1Q13671 783 aa8.18□□□□□ -1.1
ATG4D-210ENST00000588972 ARHGEF7Q14155 803 aa8.18□□□□□ -1.1
ATG4D-210ENST00000588972 SMC1AQ14683 1233 aaKnown RBP8.18□□□□□ -1.1
ATG4D-210ENST00000588972 KARSQ15046 597 aaKnown RBP8.18□□□□□ -1.1
ATG4D-210ENST00000588972 STK38Q15208 465 aa8.18□□□□□ -1.1
ATG4D-210ENST00000588972 C1orf122Q6ZSJ8 110 aa8.18□□□□□ -1.1
ATG4D-210ENST00000588972 FAM228AQ86W67 206 aa8.18□□□□□ -1.1
ATG4D-210ENST00000588972 GAS2L3Q86XJ1 694 aa8.18□□□□□ -1.1
ATG4D-210ENST00000588972 KRT73Q86Y46 540 aa8.18□□□□□ -1.1
ATG4D-210ENST00000588972 CCDC28AQ8IWP9 274 aa8.18□□□□□ -1.1
ATG4D-210ENST00000588972 FITM2Q8N6M3 262 aa8.18□□□□□ -1.1
ATG4D-210ENST00000588972 OR1N1Q8NGS0 311 aa8.18□□□□□ -1.1
ATG4D-210ENST00000588972 TBC1D15Q8TC07 691 aa8.18□□□□□ -1.1
ATG4D-210ENST00000588972 PRPF31Q8WWY3 499 aaKnown RBP8.18□□□□□ -1.1
ATG4D-210ENST00000588972 RUBCNQ92622 972 aa8.18□□□□□ -1.1
ATG4D-210ENST00000588972 KCNN1Q92952 543 aa8.18□□□□□ -1.1
ATG4D-210ENST00000588972 NLRP4Q96MN2 994 aa8.18□□□□□ -1.1
ATG4D-210ENST00000588972 ZNF396Q96N95 335 aaPredicted RBP8.18□□□□□ -1.1
ATG4D-210ENST00000588972 ZNF558Q96NG5 402 aa8.18□□□□□ -1.1
ATG4D-210ENST00000588972 PYM1Q9BRP8 204 aaKnown RBP8.18□□□□□ -1.1
ATG4D-210ENST00000588972 SMOC2Q9H3U7 446 aa8.18□□□□□ -1.1
ATG4D-210ENST00000588972 ELAC1Q9H777 363 aaKnown RBP8.18□□□□□ -1.1
ATG4D-210ENST00000588972 POLD4Q9HCU8 107 aa8.18□□□□□ -1.1
ATG4D-210ENST00000588972 ARHGEF35A5YM69 484 aa8.17□□□□□ -1.1
ATG4D-210ENST00000588972 CCP110O43303 1012 aa8.17□□□□□ -1.1
ATG4D-210ENST00000588972 ADAM23O75077 832 aa8.17□□□□□ -1.1
ATG4D-210ENST00000588972 JUNBP17275 347 aaPredicted RBP8.17□□□□□ -1.1
ATG4D-210ENST00000588972 AOC1P19801 751 aa8.17□□□□□ -1.1
ATG4D-210ENST00000588972 MUTP22033 750 aa8.17□□□□□ -1.1
ATG4D-210ENST00000588972 LONP1P36776 959 aaKnown RBP8.17□□□□□ -1.1
ATG4D-210ENST00000588972 RXRGP48443 463 aa8.17□□□□□ -1.1
ATG4D-210ENST00000588972 CRYBB1P53674 252 aaPredicted RBP8.17□□□□□ -1.1
ATG4D-210ENST00000588972 PNLIPRP1P54315 467 aa8.17□□□□□ -1.1
ATG4D-210ENST00000588972 LAMTOR4Q0VGL1 99 aa8.17□□□□□ -1.1
ATG4D-210ENST00000588972 SSPNQ14714 243 aa8.17□□□□□ -1.1
ATG4D-210ENST00000588972 SLC39A14Q15043 492 aa8.17□□□□□ -1.1
ATG4D-210ENST00000588972 TMEM119Q4V9L6 283 aa8.17□□□□□ -1.1
ATG4D-210ENST00000588972 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.17□□□□□ -1.1
ATG4D-210ENST00000588972 ATXN7L2Q5T6C5 722 aaPredicted RBP8.17□□□□□ -1.1
ATG4D-210ENST00000588972 KLHL17Q6TDP4 642 aa8.17□□□□□ -1.1
ATG4D-210ENST00000588972 ESX1Q8N693 406 aa8.17□□□□□ -1.1
ATG4D-210ENST00000588972 PDPRQ8NCN5 879 aa8.17□□□□□ -1.1
ATG4D-210ENST00000588972 LINC00301Q8NCQ3 95 aa8.17□□□□□ -1.1
ATG4D-210ENST00000588972 PSPC1Q8WXF1 523 aaKnown RBP8.17□□□□□ -1.1
ATG4D-210ENST00000588972 EPSTI1Q96J88 318 aa8.17□□□□□ -1.1
ATG4D-210ENST00000588972 MESP1Q9BRJ9 268 aa8.17□□□□□ -1.1
ATG4D-210ENST00000588972 LSM14BQ9BX40 385 aaKnown RBP8.17□□□□□ -1.1
ATG4D-210ENST00000588972 TMEM117Q9H0C3 514 aa8.17□□□□□ -1.1
ATG4D-210ENST00000588972 POLR3FQ9H1D9 316 aaPredicted RBP8.17□□□□□ -1.1
ATG4D-210ENST00000588972 MINDY3Q9H8M7 445 aa8.17□□□□□ -1.1
ATG4D-210ENST00000588972 SAYSD1Q9NPB0 183 aa8.17□□□□□ -1.1
ATG4D-210ENST00000588972 WASH6PQ9NQA3 447 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms