RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 MS4A14Q96JA4 679 aa19.25■□□□□ 0.67
CLPTM1-209ENST00000588855 IL12RB2Q99665 862 aa19.25■□□□□ 0.67
CLPTM1-209ENST00000588855 MGME1Q9BQP7 344 aa19.25■□□□□ 0.67
CLPTM1-209ENST00000588855 HEPHQ9BQS7 1158 aa19.25■□□□□ 0.67
CLPTM1-209ENST00000588855 RBM22Q9NW64 420 aaKnown RBP eCLIP19.25■□□□□ 0.672e-6■■□□□ 14.4
CLPTM1-209ENST00000588855 PPM1HQ9ULR3 514 aa19.25■□□□□ 0.67
CLPTM1-209ENST00000588855 FANCMQ8IYD8 2048 aa19.24■□□□□ 0.67
CLPTM1-209ENST00000588855 TTC24A2A3L6 582 aaPredicted RBP19.24■□□□□ 0.67
CLPTM1-209ENST00000588855 CTAGE9A4FU28 777 aa19.24■□□□□ 0.67
CLPTM1-209ENST00000588855 KRIT1O00522 736 aa19.24■□□□□ 0.67
CLPTM1-209ENST00000588855 MID1O15344 667 aa19.24■□□□□ 0.67
CLPTM1-209ENST00000588855 LEFTY1O75610 366 aa19.24■□□□□ 0.67
CLPTM1-209ENST00000588855 JCHAINP01591 159 aa19.24■□□□□ 0.67
CLPTM1-209ENST00000588855 HLA-DQB2P05538 268 aa19.24■□□□□ 0.67
CLPTM1-209ENST00000588855 C7P10643 843 aa19.24■□□□□ 0.67
CLPTM1-209ENST00000588855 RBL1P28749 1068 aa19.24■□□□□ 0.67
CLPTM1-209ENST00000588855 HSPA9P38646 679 aaKnown RBP19.24■□□□□ 0.67
CLPTM1-209ENST00000588855 ETF1P62495 437 aaKnown RBP19.24■□□□□ 0.67
CLPTM1-209ENST00000588855 SIX1Q15475 284 aaPredicted RBP19.24■□□□□ 0.67
CLPTM1-209ENST00000588855 LONRF2Q1L5Z9 754 aa19.24■□□□□ 0.67
CLPTM1-209ENST00000588855 MYLK3Q32MK0 819 aa19.24■□□□□ 0.67
CLPTM1-209ENST00000588855 ZNF528Q3MIS6 628 aa19.24■□□□□ 0.67
CLPTM1-209ENST00000588855 POM121L1PQ3SYA9 428 aa19.24■□□□□ 0.67
CLPTM1-209ENST00000588855 WDR5BQ86VZ2 330 aa19.24■□□□□ 0.67
CLPTM1-209ENST00000588855 RASGEF1CQ8N431 466 aa19.24■□□□□ 0.67
CLPTM1-209ENST00000588855 NELL1Q92832 810 aa19.24■□□□□ 0.67
CLPTM1-209ENST00000588855 C16orf45Q96MC5 204 aaPredicted RBP19.24■□□□□ 0.67
CLPTM1-209ENST00000588855 TTLL3Q9Y4R7 772 aa19.24■□□□□ 0.67
CLPTM1-209ENST00000588855 C1QTNF3-AMACRE9PGA6 284 aa19.23■□□□□ 0.67
CLPTM1-209ENST00000588855 ZNF185O15231 689 aa19.23■□□□□ 0.67
CLPTM1-209ENST00000588855 NEBLO76041 1014 aa19.23■□□□□ 0.67
CLPTM1-209ENST00000588855 DNTTP04053 509 aa19.23■□□□□ 0.67
CLPTM1-209ENST00000588855 PRNPP04156 253 aa19.23■□□□□ 0.67
CLPTM1-209ENST00000588855 CR2P20023 1033 aa19.23■□□□□ 0.67
CLPTM1-209ENST00000588855 NSUN2Q08J23 767 aaKnown RBP eCLIP19.23■□□□□ 0.67
CLPTM1-209ENST00000588855 ARSIQ5FYB1 569 aa19.23■□□□□ 0.67
CLPTM1-209ENST00000588855 PAPD7Q5XG87 772 aaKnown RBP19.23■□□□□ 0.67
CLPTM1-209ENST00000588855 SYT10Q6XYQ8 523 aa19.23■□□□□ 0.67
CLPTM1-209ENST00000588855 SRLQ86TD4 932 aa19.23■□□□□ 0.67
CLPTM1-209ENST00000588855 CDKL3Q8IVW4 592 aaPredicted RBP19.23■□□□□ 0.67
CLPTM1-209ENST00000588855 CNTD1Q8N815 330 aa19.23■□□□□ 0.67
CLPTM1-209ENST00000588855 SLC35B2Q8TB61 432 aa19.23■□□□□ 0.67
CLPTM1-209ENST00000588855 HTR3CQ8WXA8 447 aa19.23■□□□□ 0.67
CLPTM1-209ENST00000588855 NSMCE3Q96MG7 304 aa19.23■□□□□ 0.67
CLPTM1-209ENST00000588855 SMARCAL1Q9NZC9 954 aa19.23■□□□□ 0.67
CLPTM1-209ENST00000588855 DNPEPQ9ULA0 475 aa19.23■□□□□ 0.67
CLPTM1-209ENST00000588855 CCDC163A0A0D9SF12 145 aa19.22■□□□□ 0.67
CLPTM1-209ENST00000588855 H0Y858 1186 aa19.22■□□□□ 0.67
CLPTM1-209ENST00000588855 PIGNO95427 931 aa19.22■□□□□ 0.67
CLPTM1-209ENST00000588855 POP4O95707 220 aaKnown RBP19.22■□□□□ 0.67
CLPTM1-209ENST00000588855 ADH1BP00325 375 aa19.22■□□□□ 0.67
CLPTM1-209ENST00000588855 ACADMP11310 421 aa19.22■□□□□ 0.67
CLPTM1-209ENST00000588855 TCP1P17987 556 aaKnown RBP19.22■□□□□ 0.67
CLPTM1-209ENST00000588855 PTPN3P26045 913 aa19.22■□□□□ 0.67
CLPTM1-209ENST00000588855 SLC8A1P32418 973 aa19.22■□□□□ 0.67
CLPTM1-209ENST00000588855 CSNK1DP48730 415 aa19.22■□□□□ 0.67
CLPTM1-209ENST00000588855 SCNN1BP51168 640 aa19.22■□□□□ 0.67
CLPTM1-209ENST00000588855 NRLP54845 237 aa19.22■□□□□ 0.67
CLPTM1-209ENST00000588855 WASHC5Q12768 1159 aa19.22■□□□□ 0.67
CLPTM1-209ENST00000588855 DARS2Q6PI48 645 aaKnown RBP19.22■□□□□ 0.67
CLPTM1-209ENST00000588855 LONP2Q86WA8 852 aa19.22■□□□□ 0.67
CLPTM1-209ENST00000588855 TMIEQ8NEW7 156 aa19.22■□□□□ 0.67
CLPTM1-209ENST00000588855 C1orf54Q8WWF1 131 aa19.22■□□□□ 0.67
CLPTM1-209ENST00000588855 RLN3Q8WXF3 142 aa19.22■□□□□ 0.67
CLPTM1-209ENST00000588855 FAM126AQ9BYI3 521 aaPredicted RBP19.22■□□□□ 0.67
CLPTM1-209ENST00000588855 POLR1EQ9GZS1 481 aaKnown RBP19.22■□□□□ 0.67
CLPTM1-209ENST00000588855 PABPC3Q9H361 631 aaKnown RBP19.22■□□□□ 0.67
CLPTM1-209ENST00000588855 USP36Q9P275 1121 aaKnown RBP19.22■□□□□ 0.67
CLPTM1-209ENST00000588855 ATP8A1Q9Y2Q0 1164 aa19.22■□□□□ 0.67
CLPTM1-209ENST00000588855 CACNA1HO95180 2353 aa19.22■□□□□ 0.67
CLPTM1-209ENST00000588855 DMDP11532 3685 aa19.22■□□□□ 0.67
CLPTM1-209ENST00000588855 MUC6Q6W4X9 2439 aa19.21■□□□□ 0.67
CLPTM1-209ENST00000588855 PLK4O00444 970 aa19.21■□□□□ 0.67
CLPTM1-209ENST00000588855 KPNA3O00505 521 aaPredicted RBP19.21■□□□□ 0.67
CLPTM1-209ENST00000588855 CES2O00748 559 aa19.21■□□□□ 0.67
CLPTM1-209ENST00000588855 UGT2B4P06133 528 aa19.21■□□□□ 0.67
CLPTM1-209ENST00000588855 ZBTB16Q05516 673 aa19.21■□□□□ 0.67
CLPTM1-209ENST00000588855 RAD51Q06609 339 aa19.21■□□□□ 0.67
CLPTM1-209ENST00000588855 ITKQ08881 620 aa19.21■□□□□ 0.67
CLPTM1-209ENST00000588855 TCF15Q12870 199 aa19.21■□□□□ 0.67
CLPTM1-209ENST00000588855 NUMA1Q14980 2115 aa19.21■□□□□ 0.67
CLPTM1-209ENST00000588855 TTC31Q49AM3 519 aaPredicted RBP19.21■□□□□ 0.67
CLPTM1-209ENST00000588855 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.21■□□□□ 0.67
CLPTM1-209ENST00000588855 AADATQ8N5Z0 425 aa19.21■□□□□ 0.67
CLPTM1-209ENST00000588855 ARRDC3Q96B67 414 aa19.21■□□□□ 0.67
CLPTM1-209ENST00000588855 AGAP3Q96P47 875 aa19.21■□□□□ 0.67
CLPTM1-209ENST00000588855 NUDCD1Q96RS6 583 aa19.21■□□□□ 0.67
CLPTM1-209ENST00000588855 PRRX2Q99811 253 aa19.21■□□□□ 0.67
CLPTM1-209ENST00000588855 ZSCAN32Q9NX65 697 aa19.21■□□□□ 0.67
CLPTM1-209ENST00000588855 SERGEFQ9UGK8 458 aa19.21■□□□□ 0.67
CLPTM1-209ENST00000588855 AMACRQ9UHK6 382 aa19.21■□□□□ 0.67
CLPTM1-209ENST00000588855 TTC7AQ9ULT0 858 aaPredicted RBP19.21■□□□□ 0.67
CLPTM1-209ENST00000588855 CYP8B1Q9UNU6 501 aa19.21■□□□□ 0.67
CLPTM1-209ENST00000588855 INVSQ9Y283 1065 aa19.21■□□□□ 0.67
CLPTM1-209ENST00000588855 A0A1W2PP55 124 aa19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 BCLAF3A2AJT9 711 aaKnown RBP19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 PGRMC1O00264 195 aaKnown RBP19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 MTSS1O43312 755 aa19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 LIASO43766 372 aa19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 C5AR1P21730 350 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms