RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 CYTH1Q15438 398 aa16.31■□□□□ 0.2
RETREG3-206ENST00000588423 SPA17Q15506 151 aa16.31■□□□□ 0.2
RETREG3-206ENST00000588423 POM121L1PQ3SYA9 428 aa16.31■□□□□ 0.2
RETREG3-206ENST00000588423 TBC1D3GQ6DHY5 549 aa16.31■□□□□ 0.2
RETREG3-206ENST00000588423 TBC1D3CQ6IPX1 549 aa16.31■□□□□ 0.2
RETREG3-206ENST00000588423 VSIG1Q86XK7 387 aa16.31■□□□□ 0.2
RETREG3-206ENST00000588423 CPNE8Q86YQ8 564 aa16.31■□□□□ 0.2
RETREG3-206ENST00000588423 TBC1D3Q8IZP1 549 aaPredicted RBP16.31■□□□□ 0.2
RETREG3-206ENST00000588423 KCTD6Q8NC69 237 aa16.31■□□□□ 0.2
RETREG3-206ENST00000588423 VOPP1Q96AW1 172 aa16.31■□□□□ 0.2
RETREG3-206ENST00000588423 ZNF599Q96NL3 588 aa16.31■□□□□ 0.2
RETREG3-206ENST00000588423 ZDHHC6Q9H6R6 413 aa16.31■□□□□ 0.2
RETREG3-206ENST00000588423 ETNK2Q9NVF9 386 aa16.31■□□□□ 0.2
RETREG3-206ENST00000588423 LHX3Q9UBR4 397 aa16.31■□□□□ 0.2
RETREG3-206ENST00000588423 A0A0A6YYK5 440 aaPredicted RBP16.3■□□□□ 0.2
RETREG3-206ENST00000588423 ZNF487B1APH4 448 aa16.3■□□□□ 0.2
RETREG3-206ENST00000588423 RNF103O00237 685 aa16.3■□□□□ 0.2
RETREG3-206ENST00000588423 DFFAO00273 331 aa16.3■□□□□ 0.2
RETREG3-206ENST00000588423 TM4SF5O14894 197 aa16.3■□□□□ 0.2
RETREG3-206ENST00000588423 GRIA4P48058 902 aa16.3■□□□□ 0.2
RETREG3-206ENST00000588423 TAS2R38P59533 333 aa16.3■□□□□ 0.2
RETREG3-206ENST00000588423 RACK1P63244 317 aaKnown RBP16.3■□□□□ 0.2
RETREG3-206ENST00000588423 ATP13A4Q4VNC1 1196 aa16.3■□□□□ 0.2
RETREG3-206ENST00000588423 ZNF805Q5CZA5 627 aa16.3■□□□□ 0.2
RETREG3-206ENST00000588423 TMCO4Q5TGY1 634 aa16.3■□□□□ 0.2
RETREG3-206ENST00000588423 LRRC38Q5VT99 294 aa16.3■□□□□ 0.2
RETREG3-206ENST00000588423 LRRC49Q8IUZ0 686 aa16.3■□□□□ 0.2
RETREG3-206ENST00000588423 RYBPQ8N488 228 aaPredicted RBP16.3■□□□□ 0.2
RETREG3-206ENST00000588423 FAF2Q96CS3 445 aa16.3■□□□□ 0.2
RETREG3-206ENST00000588423 CPEB1Q9BZB8 566 aaKnown RBP16.3■□□□□ 0.2
RETREG3-206ENST00000588423 SP110Q9HB58 689 aa16.3■□□□□ 0.2
RETREG3-206ENST00000588423 TM9SF3Q9HD45 589 aa16.3■□□□□ 0.2
RETREG3-206ENST00000588423 IPO11Q9UI26 975 aaKnown RBP16.3■□□□□ 0.2
RETREG3-206ENST00000588423 PCDHA13Q9Y5I0 950 aa16.3■□□□□ 0.2
RETREG3-206ENST00000588423 PCDH15Q96QU1 1955 aa16.29■□□□□ 0.2
RETREG3-206ENST00000588423 WDR87Q6ZQQ6 2873 aa16.29■□□□□ 0.2
RETREG3-206ENST00000588423 C4orf47A7E2U8 309 aa16.29■□□□□ 0.2
RETREG3-206ENST00000588423 TMEM110-MUSTN1A8MSY1 372 aa16.29■□□□□ 0.2
RETREG3-206ENST00000588423 KRIT1O00522 736 aa16.29■□□□□ 0.2
RETREG3-206ENST00000588423 AP1G1O43747 822 aa16.29■□□□□ 0.2
RETREG3-206ENST00000588423 PALMO75781 387 aa16.29■□□□□ 0.2
RETREG3-206ENST00000588423 NDUFA10O95299 355 aa16.29■□□□□ 0.2
RETREG3-206ENST00000588423 CD48P09326 243 aa16.29■□□□□ 0.2
RETREG3-206ENST00000588423 ADRB3P13945 408 aa16.29■□□□□ 0.2
RETREG3-206ENST00000588423 CSNK1DP48730 415 aa16.29■□□□□ 0.2
RETREG3-206ENST00000588423 ATXN3P54252 364 aaPredicted RBP16.29■□□□□ 0.2
RETREG3-206ENST00000588423 PPP2CBP62714 309 aa16.29■□□□□ 0.2
RETREG3-206ENST00000588423 PPP2CAP67775 309 aa16.29■□□□□ 0.2
RETREG3-206ENST00000588423 TEAD4Q15561 434 aa16.29■□□□□ 0.2
RETREG3-206ENST00000588423 ANKRD20A8PQ5CZ79 823 aa16.29■□□□□ 0.2
RETREG3-206ENST00000588423 ATXN7L2Q5T6C5 722 aaPredicted RBP16.29■□□□□ 0.2
RETREG3-206ENST00000588423 IL27RAQ6UWB1 636 aa16.29■□□□□ 0.2
RETREG3-206ENST00000588423 PRPF39Q86UA1 669 aaKnown RBP16.29■□□□□ 0.2
RETREG3-206ENST00000588423 ZSCAN30Q86W11 494 aa16.29■□□□□ 0.2
RETREG3-206ENST00000588423 OR6K2Q8NGY2 324 aa16.29■□□□□ 0.2
RETREG3-206ENST00000588423 HCAR2Q8TDS4 363 aa16.29■□□□□ 0.2
RETREG3-206ENST00000588423 RAB7BQ96AH8 199 aa16.29■□□□□ 0.2
RETREG3-206ENST00000588423 CALR3Q96L12 384 aaKnown RBP16.29■□□□□ 0.2
RETREG3-206ENST00000588423 EBF2Q9HAK2 575 aa16.29■□□□□ 0.2
RETREG3-206ENST00000588423 DNAAF2Q9NVR5 837 aaKnown RBP16.29■□□□□ 0.2
RETREG3-206ENST00000588423 DMTF1Q9Y222 760 aa16.29■□□□□ 0.2
RETREG3-206ENST00000588423 EPN1Q9Y6I3 576 aaPredicted RBP16.29■□□□□ 0.2
RETREG3-206ENST00000588423 DMXL1Q9Y485 3027 aa16.29■□□□□ 0.2
RETREG3-206ENST00000588423 SOWAHDA6NJG2 315 aa16.28■□□□□ 0.2
RETREG3-206ENST00000588423 IPO7O95373 1038 aaKnown RBP16.28■□□□□ 0.2
RETREG3-206ENST00000588423 KDELR1P24390 212 aa16.28■□□□□ 0.2
RETREG3-206ENST00000588423 GKP32189 559 aa16.28■□□□□ 0.2
RETREG3-206ENST00000588423 GJC1P36383 396 aa16.28■□□□□ 0.2
RETREG3-206ENST00000588423 RENBPP51606 427 aa16.28■□□□□ 0.2
RETREG3-206ENST00000588423 NSUN2Q08J23 767 aaKnown RBP eCLIP16.28■□□□□ 0.2
RETREG3-206ENST00000588423 GRIK2Q13002 908 aa16.28■□□□□ 0.2
RETREG3-206ENST00000588423 MMRN1Q13201 1228 aa16.28■□□□□ 0.2
RETREG3-206ENST00000588423 PAFAH1B3Q15102 231 aaKnown RBP16.28■□□□□ 0.2
RETREG3-206ENST00000588423 FBXL19Q6PCT2 694 aa16.28■□□□□ 0.2
RETREG3-206ENST00000588423 GDPD4Q6W3E5 623 aa16.28■□□□□ 0.2
RETREG3-206ENST00000588423 ARHGAP36Q6ZRI8 547 aa16.28■□□□□ 0.2
RETREG3-206ENST00000588423 PARS2Q7L3T8 475 aaKnown RBP16.28■□□□□ 0.2
RETREG3-206ENST00000588423 ERMP1Q7Z2K6 904 aa16.28■□□□□ 0.2
RETREG3-206ENST00000588423 DGLUCYQ7Z3D6 616 aa16.28■□□□□ 0.2
RETREG3-206ENST00000588423 MINDY1Q8N5J2 469 aa16.28■□□□□ 0.2
RETREG3-206ENST00000588423 PCDH19Q8TAB3 1148 aa16.28■□□□□ 0.2
RETREG3-206ENST00000588423 TUBGCP5Q96RT8 1024 aa16.28■□□□□ 0.2
RETREG3-206ENST00000588423 CINPQ9BW66 212 aaPredicted RBP16.28■□□□□ 0.2
RETREG3-206ENST00000588423 GTPBP2Q9BX10 602 aaKnown RBP16.28■□□□□ 0.2
RETREG3-206ENST00000588423 CALN1Q9BXU9 219 aa16.28■□□□□ 0.2
RETREG3-206ENST00000588423 FSCN3Q9NQT6 498 aa16.28■□□□□ 0.2
RETREG3-206ENST00000588423 DKK3Q9UBP4 350 aa16.28■□□□□ 0.2
RETREG3-206ENST00000588423 SLCO1B1Q9Y6L6 691 aa16.28■□□□□ 0.2
RETREG3-206ENST00000588423 C16orf96A6NNT2 1141 aa16.27■□□□□ 0.2
RETREG3-206ENST00000588423 UPK3BL1B0FP48 263 aa16.27■□□□□ 0.2
RETREG3-206ENST00000588423 UPK3BL2E5RIL1 263 aa16.27■□□□□ 0.2
RETREG3-206ENST00000588423 VILLO15195 856 aa16.27■□□□□ 0.2
RETREG3-206ENST00000588423 MAFKO60675 156 aa16.27■□□□□ 0.2
RETREG3-206ENST00000588423 RNGTTO60942 597 aaKnown RBP16.27■□□□□ 0.2
RETREG3-206ENST00000588423 UGT2B4P06133 528 aa16.27■□□□□ 0.2
RETREG3-206ENST00000588423 HSPA9P38646 679 aaKnown RBP16.27■□□□□ 0.2
RETREG3-206ENST00000588423 MAPK8P45983 427 aa16.27■□□□□ 0.2
RETREG3-206ENST00000588423 NOP2P46087 812 aaKnown RBP16.27■□□□□ 0.2
RETREG3-206ENST00000588423 CSNK1EP49674 416 aaKnown RBP16.27■□□□□ 0.2
RETREG3-206ENST00000588423 SLC14A1Q13336 389 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms