RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 PFDN6O15212 129 aa12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 CCDC166P0CW27 439 aa12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 HNRNPLP14866 589 aaKnown RBP eCLIP12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 TACR2P21452 398 aa12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 PRKCHP24723 683 aa12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 CCNCP24863 283 aa12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 CRHR1P34998 444 aa12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 RHOAP61586 193 aa12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 FSCBQ5H9T9 825 aa12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 ASIC4Q96FT7 647 aa12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 TBATAQ96M53 351 aa12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 POLR1EQ9GZS1 481 aaKnown RBP12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 UBA2Q9UBT2 640 aaPredicted RBP12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 ZNF180Q9UJW8 692 aa12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 MTMR11A4FU01 709 aa12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 ABL2P42684 1182 aa12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 ZNF135P52742 658 aaPredicted RBP12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 PLD6Q8N2A8 252 aaKnown RBP12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 OR52K2Q8NGK3 314 aa12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 ZSCAN18Q8TBC5 510 aaPredicted RBP12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 C10orf82Q8WW14 230 aa12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 NXNL1Q96CM4 212 aa12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 CATSPER2Q96P56 530 aa12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 OLFM3Q96PB7 478 aa12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 WDR55Q9H6Y2 383 aaPredicted RBP12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 NSMCE4AQ9NXX6 385 aa12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 KCTD3Q9Y597 815 aa12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 PCDHGC4Q9Y5F7 938 aa12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 NEMP2A6NFY4 417 aa12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 PRR5-ARHGAP8B1AHC4 643 aa12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 SUPT3HB4E1H0 165 aa12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 SUPT3HO75486 399 aa12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 PDE5AO76074 875 aa12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 GLP2RO95838 553 aa12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 LRG1P02750 347 aa12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 GJA1P17302 382 aa12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 HDCP19113 662 aa12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 CD68P34810 354 aaPredicted RBP12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 ARHGAP8P85298 464 aa12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 PEX6Q13608 980 aa12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 OTUD1Q5VV17 481 aaPredicted RBP12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 RNF219Q5W0B1 726 aaPredicted RBP12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 RGS9BPQ6ZS82 235 aa12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 RBBP8Q99708 897 aa12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 SMOC2Q9H3U7 446 aa12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 FAM96AQ9H5X1 160 aa12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 PRDM16Q9HAZ2 1276 aa12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 ADA2Q9NZK5 511 aa12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 ACTL7AQ9Y615 435 aa12.6□□□□□ -0.39
SMARCA4-208ENST00000585799 SRP72O76094 671 aaKnown RBP12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 XPAP23025 273 aaPredicted RBP12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 GRK2P25098 689 aa12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 CORO1AP31146 461 aaKnown RBP12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 ABCE1P61221 599 aaKnown RBP12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 LACTB2Q53H82 288 aaPredicted RBP12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 MARK2Q7KZI7 788 aaKnown RBP12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 TAS1R1Q7RTX1 841 aa12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 MRPS31Q92665 395 aaKnown RBP12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 PRR11Q96HE9 360 aaPredicted RBP12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 ALG9Q9H6U8 611 aa12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 LSM7Q9UK45 103 aaKnown RBP12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 ANGPTL3Q9Y5C1 460 aa12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 SLC30A1Q9Y6M5 507 aa12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 ZFP37Q9Y6Q3 630 aaPredicted RBP12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 SLC38A8A6NNN8 435 aa12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 I6L893 689 aaPredicted RBP12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 SYN3O14994 580 aa12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 GALTP07902 379 aa12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 RHOQP17081 205 aa12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 EPHA3P29320 983 aa12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 FMO4P31512 558 aa12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 EPHB3P54753 998 aa12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 STX1BP61266 288 aa12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 SLC25A3Q00325 362 aa12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 SEMG2Q02383 582 aa12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 MS4A13Q5J8X5 152 aa12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 CGB2Q6NT52 195 aa12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 FAM171BQ6P995 826 aa12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 COLGALT2Q8IYK4 626 aa12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 LRRC43Q8N309 656 aa12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 IGSF8Q969P0 613 aa12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 ZNF558Q96NG5 402 aa12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 HAPLN3Q96S86 360 aa12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 OSBPL2Q9H1P3 480 aa12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 GJB5O95377 273 aa12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 ANP32DO95626 131 aa12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 ALDOAP04075 364 aaKnown RBP12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 CTPS1P17812 591 aa12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 MPSTP25325 297 aa12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 GRIA4P48058 902 aa12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 LIMK2P53671 638 aa12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 TAS2R39P59534 338 aa12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 LBRQ14739 615 aaKnown RBP12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 RCN1Q15293 331 aa12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 RASIP1Q5U651 963 aa12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 PIK3R6Q5UE93 754 aa12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 MRNIPQ6NTE8 343 aa12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 CNSTQ6PJW8 725 aa12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 ZNF534Q76KX8 674 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms