RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 MMEP08473 750 aa15.27■□□□□ 0.04
VAPA-209ENST00000585042 NME1P15531 152 aaKnown RBP15.27■□□□□ 0.04
VAPA-209ENST00000585042 RHOQP17081 205 aa15.27■□□□□ 0.04
VAPA-209ENST00000585042 DNA2P51530 1060 aa15.27■□□□□ 0.04
VAPA-209ENST00000585042 ERVPABLB-1P60509 514 aa15.27■□□□□ 0.04
VAPA-209ENST00000585042 C19orf57Q0VDD7 668 aa15.27■□□□□ 0.04
VAPA-209ENST00000585042 FGL2Q14314 439 aa15.27■□□□□ 0.04
VAPA-209ENST00000585042 FZD2Q14332 565 aa15.27■□□□□ 0.04
VAPA-209ENST00000585042 POLD3Q15054 466 aaPredicted RBP15.27■□□□□ 0.04
VAPA-209ENST00000585042 ZNF805Q5CZA5 627 aa15.27■□□□□ 0.04
VAPA-209ENST00000585042 TCP11X2Q5H9J9 407 aa15.27■□□□□ 0.04
VAPA-209ENST00000585042 MANEALQ5VSG8 457 aa15.27■□□□□ 0.04
VAPA-209ENST00000585042 TAF3Q5VWG9 929 aa15.27■□□□□ 0.04
VAPA-209ENST00000585042 ZCCHC8Q6NZY4 707 aaKnown RBP15.27■□□□□ 0.04
VAPA-209ENST00000585042 KDM7AQ6ZMT4 941 aa15.27■□□□□ 0.04
VAPA-209ENST00000585042 STRADAQ7RTN6 431 aa15.27■□□□□ 0.04
VAPA-209ENST00000585042 TMC6Q7Z403 805 aa15.27■□□□□ 0.04
VAPA-209ENST00000585042 PARGQ86W56 976 aa15.27■□□□□ 0.04
VAPA-209ENST00000585042 TPCN2Q8NHX9 752 aa15.27■□□□□ 0.04
VAPA-209ENST00000585042 BTN2A2Q8WVV5 523 aa15.27■□□□□ 0.04
VAPA-209ENST00000585042 SPOCK2Q92563 424 aa15.27■□□□□ 0.04
VAPA-209ENST00000585042 ARHGEF2Q92974 986 aaKnown RBP15.27■□□□□ 0.04
VAPA-209ENST00000585042 CRELD1Q96HD1 420 aa15.27■□□□□ 0.04
VAPA-209ENST00000585042 TBATAQ96M53 351 aa15.27■□□□□ 0.04
VAPA-209ENST00000585042 KLF6Q99612 283 aaPredicted RBP15.27■□□□□ 0.04
VAPA-209ENST00000585042 OSBPL1AQ9BXW6 950 aa15.27■□□□□ 0.04
VAPA-209ENST00000585042 ABCG4Q9H172 646 aa15.27■□□□□ 0.04
VAPA-209ENST00000585042 TMEM248Q9NWD8 314 aa15.27■□□□□ 0.04
VAPA-209ENST00000585042 IPO11Q9UI26 975 aaKnown RBP15.27■□□□□ 0.04
VAPA-209ENST00000585042 SALL4Q9UJQ4 1053 aa15.27■□□□□ 0.04
VAPA-209ENST00000585042 TDRD6O60522 2096 aaKnown RBP15.26■□□□□ 0.03
VAPA-209ENST00000585042 TEX51A0A1B0GUA7 166 aa15.26■□□□□ 0.03
VAPA-209ENST00000585042 ZSCAN5CA6NGD5 496 aaPredicted RBP15.26■□□□□ 0.03
VAPA-209ENST00000585042 C16orf96A6NNT2 1141 aa15.26■□□□□ 0.03
VAPA-209ENST00000585042 PES1O00541 588 aaKnown RBP15.26■□□□□ 0.03
VAPA-209ENST00000585042 FFAR2O15552 330 aa15.26■□□□□ 0.03
VAPA-209ENST00000585042 GSRP00390 522 aa15.26■□□□□ 0.03
VAPA-209ENST00000585042 CYP1A1P04798 512 aaPredicted RBP15.26■□□□□ 0.03
VAPA-209ENST00000585042 MMP8P22894 467 aa15.26■□□□□ 0.03
VAPA-209ENST00000585042 SDC4P31431 198 aa15.26■□□□□ 0.03
VAPA-209ENST00000585042 PTPN9P43378 593 aa15.26■□□□□ 0.03
VAPA-209ENST00000585042 LSSP48449 732 aa15.26■□□□□ 0.03
VAPA-209ENST00000585042 SNRPD1P62314 119 aaKnown RBP15.26■□□□□ 0.03
VAPA-209ENST00000585042 CDR2Q01850 454 aa15.26■□□□□ 0.03
VAPA-209ENST00000585042 NAA35Q5VZE5 725 aa15.26■□□□□ 0.03
VAPA-209ENST00000585042 IGF2-ASQ6U949 168 aa15.26■□□□□ 0.03
VAPA-209ENST00000585042 TRIM72Q6ZMU5 477 aa15.26■□□□□ 0.03
VAPA-209ENST00000585042 GPR155Q7Z3F1 870 aa15.26■□□□□ 0.03
VAPA-209ENST00000585042 PTAR1Q7Z6K3 402 aaPredicted RBP15.26■□□□□ 0.03
VAPA-209ENST00000585042 NLRP14Q86W24 1093 aa15.26■□□□□ 0.03
VAPA-209ENST00000585042 DRC7Q8IY82 874 aa15.26■□□□□ 0.03
VAPA-209ENST00000585042 ZNF248Q8NDW4 579 aa15.26■□□□□ 0.03
VAPA-209ENST00000585042 OR2AP1Q8NGE2 309 aa15.26■□□□□ 0.03
VAPA-209ENST00000585042 CASKIN2Q8WXE0 1202 aa15.26■□□□□ 0.03
VAPA-209ENST00000585042 CENPIQ92674 756 aaPredicted RBP15.26■□□□□ 0.03
VAPA-209ENST00000585042 FCF1Q9Y324 198 aaKnown RBP15.26■□□□□ 0.03
VAPA-209ENST00000585042 RAI2Q9Y5P3 530 aa15.26■□□□□ 0.03
VAPA-209ENST00000585042 SMG1Q96Q15 3661 aaKnown RBP15.25■□□□□ 0.03
VAPA-209ENST00000585042 CHD5Q8TDI0 1954 aa15.25■□□□□ 0.03
VAPA-209ENST00000585042 LY6G6EA0A0G2JKS1 128 aa15.25■□□□□ 0.03
VAPA-209ENST00000585042 IGLON5A6NGN9 336 aa15.25■□□□□ 0.03
VAPA-209ENST00000585042 UCNP55089 124 aa15.25■□□□□ 0.03
VAPA-209ENST00000585042 PFN3P60673 137 aa15.25■□□□□ 0.03
VAPA-209ENST00000585042 YPEL5P62699 121 aa15.25■□□□□ 0.03
VAPA-209ENST00000585042 ATP11AP98196 1134 aa15.25■□□□□ 0.03
VAPA-209ENST00000585042 TLE3Q04726 772 aa15.25■□□□□ 0.03
VAPA-209ENST00000585042 PTK2BQ14289 1009 aa15.25■□□□□ 0.03
VAPA-209ENST00000585042 MYLK3Q32MK0 819 aa15.25■□□□□ 0.03
VAPA-209ENST00000585042 DPCR1Q3MIW9 517 aa15.25■□□□□ 0.03
VAPA-209ENST00000585042 CCDC14Q49A88 953 aa15.25■□□□□ 0.03
VAPA-209ENST00000585042 C2CD6Q53TS8 623 aa15.25■□□□□ 0.03
VAPA-209ENST00000585042 PARS2Q7L3T8 475 aaKnown RBP15.25■□□□□ 0.03
VAPA-209ENST00000585042 ZNF548Q8NEK5 533 aaPredicted RBP15.25■□□□□ 0.03
VAPA-209ENST00000585042 RXFP2Q8WXD0 754 aa15.25■□□□□ 0.03
VAPA-209ENST00000585042 SLC39A7Q92504 469 aa15.25■□□□□ 0.03
VAPA-209ENST00000585042 HIC2Q96JB3 615 aa15.25■□□□□ 0.03
VAPA-209ENST00000585042 FCRL3Q96P31 734 aaPredicted RBP15.25■□□□□ 0.03
VAPA-209ENST00000585042 ZDHHC6Q9H6R6 413 aa15.25■□□□□ 0.03
VAPA-209ENST00000585042 POLR1BQ9H9Y6 1135 aa15.25■□□□□ 0.03
VAPA-209ENST00000585042 METTL5Q9NRN9 209 aaKnown RBP15.25■□□□□ 0.03
VAPA-209ENST00000585042 NOCTQ9UK39 431 aaKnown RBP15.25■□□□□ 0.03
VAPA-209ENST00000585042 U3KQA8 63 aa15.25■□□□□ 0.03
VAPA-209ENST00000585042 CAPN8A6NHC0 703 aa15.24■□□□□ 0.03
VAPA-209ENST00000585042 C2CD4BA6NLJ0 364 aa15.24■□□□□ 0.03
VAPA-209ENST00000585042 NEMP1O14524 444 aa15.24■□□□□ 0.03
VAPA-209ENST00000585042 RAD51BO15315 384 aa15.24■□□□□ 0.03
VAPA-209ENST00000585042 AQP9O43315 295 aa15.24■□□□□ 0.03
VAPA-209ENST00000585042 KDELR3O43731 214 aa15.24■□□□□ 0.03
VAPA-209ENST00000585042 PLEKP08567 350 aaPredicted RBP15.24■□□□□ 0.03
VAPA-209ENST00000585042 ACVRL1P37023 503 aa15.24■□□□□ 0.03
VAPA-209ENST00000585042 SUOXP51687 545 aa15.24■□□□□ 0.03
VAPA-209ENST00000585042 GSCP56915 257 aaPredicted RBP15.24■□□□□ 0.03
VAPA-209ENST00000585042 PCBP4P57723 403 aaKnown RBP15.24■□□□□ 0.03
VAPA-209ENST00000585042 RAD51Q06609 339 aa15.24■□□□□ 0.03
VAPA-209ENST00000585042 INO80DQ53TQ3 878 aaPredicted RBP15.24■□□□□ 0.03
VAPA-209ENST00000585042 RWDD4Q6NW29 188 aaKnown RBP15.24■□□□□ 0.03
VAPA-209ENST00000585042 SPACA3Q8IXA5 215 aa15.24■□□□□ 0.03
VAPA-209ENST00000585042 EMC1Q8N766 993 aa15.24■□□□□ 0.03
VAPA-209ENST00000585042 WDR48Q8TAF3 677 aa15.24■□□□□ 0.03
VAPA-209ENST00000585042 IFI44Q8TCB0 444 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms