RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 VAV1P15498 845 aa14.08□□□□□ -0.16
TRAF4-215ENST00000584944 GABRG2P18507 467 aa14.08□□□□□ -0.16
TRAF4-215ENST00000584944 NDUFV2P19404 249 aa14.08□□□□□ -0.16
TRAF4-215ENST00000584944 XPAP23025 273 aaPredicted RBP14.08□□□□□ -0.16
TRAF4-215ENST00000584944 HOXA6P31267 233 aa14.08□□□□□ -0.16
TRAF4-215ENST00000584944 CHRNA3P32297 505 aa14.08□□□□□ -0.16
TRAF4-215ENST00000584944 TNNT3P45378 269 aaPredicted RBP14.08□□□□□ -0.16
TRAF4-215ENST00000584944 MAPK8P45983 427 aa14.08□□□□□ -0.16
TRAF4-215ENST00000584944 FNTBP49356 437 aa14.08□□□□□ -0.16
TRAF4-215ENST00000584944 DMWDQ09019 674 aa14.08□□□□□ -0.16
TRAF4-215ENST00000584944 GRM3Q14832 879 aa14.08□□□□□ -0.16
TRAF4-215ENST00000584944 TAZQ16635 292 aa14.08□□□□□ -0.16
TRAF4-215ENST00000584944 C9orf64Q5T6V5 341 aa14.08□□□□□ -0.16
TRAF4-215ENST00000584944 DARS2Q6PI48 645 aaKnown RBP14.08□□□□□ -0.16
TRAF4-215ENST00000584944 NPNTQ6UXI9 565 aa14.08□□□□□ -0.16
TRAF4-215ENST00000584944 ARHGAP36Q6ZRI8 547 aa14.08□□□□□ -0.16
TRAF4-215ENST00000584944 CDKL3Q8IVW4 592 aaPredicted RBP14.08□□□□□ -0.16
TRAF4-215ENST00000584944 MDGA1Q8NFP4 955 aa14.08□□□□□ -0.16
TRAF4-215ENST00000584944 FRS2Q8WU20 508 aa14.08□□□□□ -0.16
TRAF4-215ENST00000584944 HDAC11Q96DB2 347 aa14.08□□□□□ -0.16
TRAF4-215ENST00000584944 PBKQ96KB5 322 aa14.08□□□□□ -0.16
TRAF4-215ENST00000584944 MRGPRX1Q96LB2 322 aa14.08□□□□□ -0.16
TRAF4-215ENST00000584944 LGMNQ99538 433 aa14.08□□□□□ -0.16
TRAF4-215ENST00000584944 HEPHQ9BQS7 1158 aa14.08□□□□□ -0.16
TRAF4-215ENST00000584944 C2orf42Q9NWW7 574 aa14.08□□□□□ -0.16
TRAF4-215ENST00000584944 SAE1Q9UBE0 346 aaPredicted RBP14.08□□□□□ -0.16
TRAF4-215ENST00000584944 EBF1Q9UH73 591 aa14.08□□□□□ -0.16
TRAF4-215ENST00000584944 HACD1B0YJ81 288 aa14.07□□□□□ -0.16
TRAF4-215ENST00000584944 RNASEH2AO75792 299 aaKnown RBP14.07□□□□□ -0.16
TRAF4-215ENST00000584944 RETP07949 1114 aa14.07□□□□□ -0.16
TRAF4-215ENST00000584944 CXCR5P32302 372 aa14.07□□□□□ -0.16
TRAF4-215ENST00000584944 SCNN1BP51168 640 aa14.07□□□□□ -0.16
TRAF4-215ENST00000584944 CCNHP51946 323 aaPredicted RBP14.07□□□□□ -0.16
TRAF4-215ENST00000584944 EIF3EP60228 445 aaKnown RBP14.07□□□□□ -0.16
TRAF4-215ENST00000584944 ZNF33AQ06730 810 aa14.07□□□□□ -0.16
TRAF4-215ENST00000584944 SPEM2Q0P670 501 aa14.07□□□□□ -0.16
TRAF4-215ENST00000584944 HNRNPDQ14103 355 aaKnown RBP14.07□□□□□ -0.16
TRAF4-215ENST00000584944 CST6Q15828 149 aa14.07□□□□□ -0.16
TRAF4-215ENST00000584944 LONRF2Q1L5Z9 754 aa14.07□□□□□ -0.16
TRAF4-215ENST00000584944 ATXN7L2Q5T6C5 722 aaPredicted RBP14.07□□□□□ -0.16
TRAF4-215ENST00000584944 DPY19L3Q6ZPD9 716 aa14.07□□□□□ -0.16
TRAF4-215ENST00000584944 C11orf74Q86VG3 221 aa14.07□□□□□ -0.16
TRAF4-215ENST00000584944 TP53INP2Q8IXH6 220 aa14.07□□□□□ -0.16
TRAF4-215ENST00000584944 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.07□□□□□ -0.16
TRAF4-215ENST00000584944 OR2A12Q8NGT7 310 aa14.07□□□□□ -0.16
TRAF4-215ENST00000584944 OR6K2Q8NGY2 324 aa14.07□□□□□ -0.16
TRAF4-215ENST00000584944 PTPRN2Q92932 1015 aa14.07□□□□□ -0.16
TRAF4-215ENST00000584944 MYO19Q96H55 970 aa14.07□□□□□ -0.16
TRAF4-215ENST00000584944 LRIG1Q96JA1 1093 aa14.07□□□□□ -0.16
TRAF4-215ENST00000584944 EXOC2Q96KP1 924 aa14.07□□□□□ -0.16
TRAF4-215ENST00000584944 TSGA13Q96PP4 275 aa14.07□□□□□ -0.16
TRAF4-215ENST00000584944 TLR10Q9BXR5 811 aa14.07□□□□□ -0.16
TRAF4-215ENST00000584944 POLR1EQ9GZS1 481 aaKnown RBP14.07□□□□□ -0.16
TRAF4-215ENST00000584944 MKRN2Q9H000 416 aaKnown RBP14.07□□□□□ -0.16
TRAF4-215ENST00000584944 RSPH9Q9H1X1 276 aaPredicted RBP14.07□□□□□ -0.16
TRAF4-215ENST00000584944 PDFQ9HBH1 243 aa14.07□□□□□ -0.16
TRAF4-215ENST00000584944 NT5MQ9NPB1 228 aa14.07□□□□□ -0.16
TRAF4-215ENST00000584944 SCUBE2Q9NQ36 999 aa14.07□□□□□ -0.16
TRAF4-215ENST00000584944 RBM22Q9NW64 420 aaKnown RBP eCLIP14.07□□□□□ -0.162e-8■□□□□ 8.6
TRAF4-215ENST00000584944 CDV3Q9UKY7 258 aaKnown RBP14.07□□□□□ -0.16
TRAF4-215ENST00000584944 ACTL7AQ9Y615 435 aa14.07□□□□□ -0.16
TRAF4-215ENST00000584944 SDK1Q7Z5N4 2213 aa14.07□□□□□ -0.16
TRAF4-215ENST00000584944 RALGAPA1Q6GYQ0 2036 aa14.07□□□□□ -0.16
TRAF4-215ENST00000584944 ATG2BQ96BY7 2078 aa14.06□□□□□ -0.16
TRAF4-215ENST00000584944 CCDC163A0A0D9SF12 145 aa14.06□□□□□ -0.16
TRAF4-215ENST00000584944 KCNK1O00180 336 aa14.06□□□□□ -0.16
TRAF4-215ENST00000584944 LRP3O75074 770 aa14.06□□□□□ -0.16
TRAF4-215ENST00000584944 RPP40O75818 363 aaKnown RBP14.06□□□□□ -0.16
TRAF4-215ENST00000584944 FGGP02679 453 aa14.06□□□□□ -0.16
TRAF4-215ENST00000584944 PECAM1P16284 738 aaPredicted RBP14.06□□□□□ -0.16
TRAF4-215ENST00000584944 C5AR1P21730 350 aa14.06□□□□□ -0.16
TRAF4-215ENST00000584944 CA4P22748 312 aa14.06□□□□□ -0.16
TRAF4-215ENST00000584944 SERPINA4P29622 427 aa14.06□□□□□ -0.16
TRAF4-215ENST00000584944 OXTRP30559 389 aa14.06□□□□□ -0.16
TRAF4-215ENST00000584944 SLC8A1P32418 973 aa14.06□□□□□ -0.16
TRAF4-215ENST00000584944 CNR2P34972 360 aa14.06□□□□□ -0.16
TRAF4-215ENST00000584944 OTUD4Q01804 1114 aaKnown RBP14.06□□□□□ -0.16
TRAF4-215ENST00000584944 PPIDQ08752 370 aaKnown RBP14.06□□□□□ -0.16
TRAF4-215ENST00000584944 SLC10A7Q0GE19 358 aa14.06□□□□□ -0.16
TRAF4-215ENST00000584944 SLC10A2Q12908 348 aaPredicted RBP14.06□□□□□ -0.16
TRAF4-215ENST00000584944 XRCC4Q13426 336 aa14.06□□□□□ -0.16
TRAF4-215ENST00000584944 SIM2Q14190 667 aaPredicted RBP14.06□□□□□ -0.16
TRAF4-215ENST00000584944 MYLK3Q32MK0 819 aa14.06□□□□□ -0.16
TRAF4-215ENST00000584944 POM121L1PQ3SYA9 428 aa14.06□□□□□ -0.16
TRAF4-215ENST00000584944 ARSIQ5FYB1 569 aa14.06□□□□□ -0.16
TRAF4-215ENST00000584944 AADACL2Q6P093 401 aa14.06□□□□□ -0.16
TRAF4-215ENST00000584944 PRR23BQ6ZRT6 265 aa14.06□□□□□ -0.16
TRAF4-215ENST00000584944 ADAT2Q7Z6V5 191 aaKnown RBP14.06□□□□□ -0.16
TRAF4-215ENST00000584944 FAM124AQ86V42 546 aa14.06□□□□□ -0.16
TRAF4-215ENST00000584944 KBTBD6Q86V97 674 aa14.06□□□□□ -0.16
TRAF4-215ENST00000584944 WDR5BQ86VZ2 330 aa14.06□□□□□ -0.16
TRAF4-215ENST00000584944 PLPP6Q8IY26 295 aa14.06□□□□□ -0.16
TRAF4-215ENST00000584944 PIP4K2CQ8TBX8 421 aa14.06□□□□□ -0.16
TRAF4-215ENST00000584944 ACTL9Q8TC94 416 aa14.06□□□□□ -0.16
TRAF4-215ENST00000584944 PSKH2Q96QS6 385 aa14.06□□□□□ -0.16
TRAF4-215ENST00000584944 NAPGQ99747 312 aaPredicted RBP14.06□□□□□ -0.16
TRAF4-215ENST00000584944 RTKNQ9BST9 563 aa14.06□□□□□ -0.16
TRAF4-215ENST00000584944 OSBPL1AQ9BXW6 950 aa14.06□□□□□ -0.16
TRAF4-215ENST00000584944 SLC6A17Q9H1V8 727 aa14.06□□□□□ -0.16
TRAF4-215ENST00000584944 ATP13A3Q9H7F0 1226 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms