RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 DDX6P26196 483 aaKnown RBP eCLIP12.17□□□□□ -0.46
GGA3-217ENST00000583667 MAGEA3P43357 314 aa12.17□□□□□ -0.46
GGA3-217ENST00000583667 PXNP49023 591 aaPredicted RBP12.17□□□□□ -0.46
GGA3-217ENST00000583667 ARL4CP56559 192 aa12.17□□□□□ -0.46
GGA3-217ENST00000583667 AP1B1Q10567 949 aa12.17□□□□□ -0.46
GGA3-217ENST00000583667 SLC29A2Q14542 456 aa12.17□□□□□ -0.46
GGA3-217ENST00000583667 HIF1AQ16665 826 aa12.17□□□□□ -0.46
GGA3-217ENST00000583667 KCTD19Q17RG1 926 aaPredicted RBP12.17□□□□□ -0.46
GGA3-217ENST00000583667 PARP15Q460N3 678 aa12.17□□□□□ -0.46
GGA3-217ENST00000583667 FAM133BQ5BKY9 247 aaKnown RBP12.17□□□□□ -0.46
GGA3-217ENST00000583667 ADGRF1Q5T601 910 aa12.17□□□□□ -0.46
GGA3-217ENST00000583667 EMC10Q5UCC4 262 aa12.17□□□□□ -0.46
GGA3-217ENST00000583667 ANKRD22Q5VYY1 191 aa12.17□□□□□ -0.46
GGA3-217ENST00000583667 DENND2CQ68D51 928 aa12.17□□□□□ -0.46
GGA3-217ENST00000583667 NADSYN1Q6IA69 706 aa12.17□□□□□ -0.46
GGA3-217ENST00000583667 TIGD7Q6NT04 549 aaPredicted RBP12.17□□□□□ -0.46
GGA3-217ENST00000583667 RWDD4Q6NW29 188 aaKnown RBP12.17□□□□□ -0.46
GGA3-217ENST00000583667 FAM217AQ8IXS0 508 aa12.17□□□□□ -0.46
GGA3-217ENST00000583667 PDIK1LQ8N165 341 aa12.17□□□□□ -0.46
GGA3-217ENST00000583667 ZNF567Q8N184 647 aa12.17□□□□□ -0.46
GGA3-217ENST00000583667 ELMOD1Q8N336 334 aa12.17□□□□□ -0.46
GGA3-217ENST00000583667 CCNYQ8ND76 341 aa12.17□□□□□ -0.46
GGA3-217ENST00000583667 CCDC110Q8TBZ0 833 aa12.17□□□□□ -0.46
GGA3-217ENST00000583667 UBLCP1Q8WVY7 318 aaPredicted RBP12.17□□□□□ -0.46
GGA3-217ENST00000583667 IRF7Q92985 503 aa12.17□□□□□ -0.46
GGA3-217ENST00000583667 ZFRQ96KR1 1074 aaKnown RBP12.17□□□□□ -0.46
GGA3-217ENST00000583667 TEKT5Q96M29 485 aa12.17□□□□□ -0.46
GGA3-217ENST00000583667 IL12RB2Q99665 862 aa12.17□□□□□ -0.46
GGA3-217ENST00000583667 SLC39A8Q9C0K1 460 aa12.17□□□□□ -0.46
GGA3-217ENST00000583667 NOL6Q9H6R4 1146 aaKnown RBP12.17□□□□□ -0.46
GGA3-217ENST00000583667 PPCSQ9HAB8 311 aa12.17□□□□□ -0.46
GGA3-217ENST00000583667 MRPS23Q9Y3D9 190 aaKnown RBP12.17□□□□□ -0.46
GGA3-217ENST00000583667 HECTD1Q9ULT8 2610 aa12.16□□□□□ -0.46
GGA3-217ENST00000583667 NRG2O14511 850 aaPredicted RBP12.16□□□□□ -0.46
GGA3-217ENST00000583667 PSMD3O43242 534 aa12.16□□□□□ -0.46
GGA3-217ENST00000583667 C1QL1O75973 258 aa12.16□□□□□ -0.46
GGA3-217ENST00000583667 TMEM63AO94886 807 aa12.16□□□□□ -0.46
GGA3-217ENST00000583667 SUN1O94901 812 aa12.16□□□□□ -0.46
GGA3-217ENST00000583667 MAP3K6O95382 1288 aa12.16□□□□□ -0.46
GGA3-217ENST00000583667 KLKB1P03952 638 aa12.16□□□□□ -0.46
GGA3-217ENST00000583667 HDCP19113 662 aa12.16□□□□□ -0.46
GGA3-217ENST00000583667 CDH4P55283 916 aa12.16□□□□□ -0.46
GGA3-217ENST00000583667 SARNPP82979 210 aaKnown RBP12.16□□□□□ -0.46
GGA3-217ENST00000583667 ZNF844Q08AG5 666 aa12.16□□□□□ -0.46
GGA3-217ENST00000583667 HNRNPDQ14103 355 aaKnown RBP12.16□□□□□ -0.46
GGA3-217ENST00000583667 LRRC32Q14392 662 aa12.16□□□□□ -0.46
GGA3-217ENST00000583667 RASA2Q15283 850 aa12.16□□□□□ -0.46
GGA3-217ENST00000583667 TTC39BQ5VTQ0 682 aaPredicted RBP12.16□□□□□ -0.46
GGA3-217ENST00000583667 ARMC3Q5W041 872 aa12.16□□□□□ -0.46
GGA3-217ENST00000583667 RAP1GAP2Q684P5 730 aa12.16□□□□□ -0.46
GGA3-217ENST00000583667 ITPRIPL1Q6GPH6 555 aa12.16□□□□□ -0.46
GGA3-217ENST00000583667 ARHGEF18Q6ZSZ5 1173 aa12.16□□□□□ -0.46
GGA3-217ENST00000583667 HTR3DQ70Z44 454 aa12.16□□□□□ -0.46
GGA3-217ENST00000583667 CYS1Q717R9 158 aa12.16□□□□□ -0.46
GGA3-217ENST00000583667 GAREM2Q75VX8 874 aa12.16□□□□□ -0.46
GGA3-217ENST00000583667 CHST9Q7L1S5 443 aa12.16□□□□□ -0.46
GGA3-217ENST00000583667 TP53INP2Q8IXH6 220 aa12.16□□□□□ -0.46
GGA3-217ENST00000583667 GOLGA6L1Q8N7Z2 621 aa12.16□□□□□ -0.46
GGA3-217ENST00000583667 KIAA1958Q8N8K9 716 aa12.16□□□□□ -0.46
GGA3-217ENST00000583667 MRPS31Q92665 395 aaKnown RBP12.16□□□□□ -0.46
GGA3-217ENST00000583667 IGSF8Q969P0 613 aa12.16□□□□□ -0.46
GGA3-217ENST00000583667 RUFY1Q96T51 708 aa12.16□□□□□ -0.46
GGA3-217ENST00000583667 NACA2Q9H009 215 aa12.16□□□□□ -0.46
GGA3-217ENST00000583667 TMBIM4Q9HC24 238 aa12.16□□□□□ -0.46
GGA3-217ENST00000583667 XAB2Q9HCS7 855 aaKnown RBP12.16□□□□□ -0.46
GGA3-217ENST00000583667 TMEM9BQ9NQ34 198 aa12.16□□□□□ -0.46
GGA3-217ENST00000583667 NINJ2Q9NZG7 142 aa12.16□□□□□ -0.46
GGA3-217ENST00000583667 FETUBQ9UGM5 382 aa12.16□□□□□ -0.46
GGA3-217ENST00000583667 VANGL2Q9ULK5 521 aa12.16□□□□□ -0.46
GGA3-217ENST00000583667 ZNF510Q9Y2H8 683 aa12.16□□□□□ -0.46
GGA3-217ENST00000583667 NOTCH4Q99466 2003 aa12.15□□□□□ -0.46
GGA3-217ENST00000583667 TCRBV7S3A2A0A539 114 aa12.15□□□□□ -0.46
GGA3-217ENST00000583667 C2orf78A6NCI8 922 aa12.15□□□□□ -0.46
GGA3-217ENST00000583667 ARHGAP42A6NI28 874 aa12.15□□□□□ -0.46
GGA3-217ENST00000583667 F5H5T6 163 aa12.15□□□□□ -0.46
GGA3-217ENST00000583667 H3BQF6 201 aa12.15□□□□□ -0.46
GGA3-217ENST00000583667 AP3B1O00203 1094 aa12.15□□□□□ -0.46
GGA3-217ENST00000583667 CLDN11O75508 207 aa12.15□□□□□ -0.46
GGA3-217ENST00000583667 SPAG6O75602 509 aa12.15□□□□□ -0.46
GGA3-217ENST00000583667 PEX11BO96011 259 aa12.15□□□□□ -0.46
GGA3-217ENST00000583667 GSTA2P09210 222 aa12.15□□□□□ -0.46
GGA3-217ENST00000583667 PTPN2P17706 415 aa12.15□□□□□ -0.46
GGA3-217ENST00000583667 GABRR2P28476 465 aa12.15□□□□□ -0.46
GGA3-217ENST00000583667 GDI1P31150 447 aa12.15□□□□□ -0.46
GGA3-217ENST00000583667 BASP1P80723 227 aaKnown RBP12.15□□□□□ -0.46
GGA3-217ENST00000583667 STAT4Q14765 748 aa12.15□□□□□ -0.46
GGA3-217ENST00000583667 KYNUQ16719 465 aa12.15□□□□□ -0.46
GGA3-217ENST00000583667 SLC5A9Q2M3M2 681 aa12.15□□□□□ -0.46
GGA3-217ENST00000583667 ANO4Q32M45 955 aa12.15□□□□□ -0.46
GGA3-217ENST00000583667 PLK5Q496M5 336 aa12.15□□□□□ -0.46
GGA3-217ENST00000583667 ALFQ53S48 1182 aa12.15□□□□□ -0.46
GGA3-217ENST00000583667 RABGAP1LQ5R372 815 aa12.15□□□□□ -0.46
GGA3-217ENST00000583667 C6orf118Q5T5N4 469 aa12.15□□□□□ -0.46
GGA3-217ENST00000583667 AGBL2Q5U5Z8 902 aa12.15□□□□□ -0.46
GGA3-217ENST00000583667 ZNF783Q6ZMS7 281 aa12.15□□□□□ -0.46
GGA3-217ENST00000583667 Q6ZNB5 142 aa12.15□□□□□ -0.46
GGA3-217ENST00000583667 B4GALNT4Q76KP1 1039 aa12.15□□□□□ -0.46
GGA3-217ENST00000583667 PID1Q7Z2X4 250 aa12.15□□□□□ -0.46
GGA3-217ENST00000583667 CAND1Q86VP6 1230 aaKnown RBP12.15□□□□□ -0.46
GGA3-217ENST00000583667 CCDC25Q86WR0 208 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms